RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 ABCC11Q96J66 1382 aa23.46■■□□□ 1.35
SSBP2-207ENST00000507472 RAB3GAP2Q9H2M9 1393 aa23.46■■□□□ 1.35
SSBP2-207ENST00000507472 PIK3C2GO75747 1445 aa23.45■■□□□ 1.34
SSBP2-207ENST00000507472 RXRBP28702 533 aa23.45■■□□□ 1.34
SSBP2-207ENST00000507472 C8orf37Q96NL8 207 aa23.45■■□□□ 1.34
SSBP2-207ENST00000507472 TECPR2O15040 1411 aa23.43■■□□□ 1.34
SSBP2-207ENST00000507472 ADAMTS2O95450 1211 aa23.43■■□□□ 1.34
SSBP2-207ENST00000507472 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
SSBP2-207ENST00000507472 PLEKHH1Q9ULM0 1364 aa23.42■■□□□ 1.34
SSBP2-207ENST00000507472 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
SSBP2-207ENST00000507472 IFT172Q9UG01 1749 aa23.42■■□□□ 1.34
SSBP2-207ENST00000507472 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
SSBP2-207ENST00000507472 FOXO3O43524 673 aa23.4■■□□□ 1.34
SSBP2-207ENST00000507472 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
SSBP2-207ENST00000507472 YTHDC2Q9H6S0 1430 aaKnown RBP23.4■■□□□ 1.34
SSBP2-207ENST00000507472 LAMC1P11047 1609 aa23.4■■□□□ 1.34
SSBP2-207ENST00000507472 NPHP3Q7Z494 1330 aa23.39■■□□□ 1.34
SSBP2-207ENST00000507472 QTRT2Q9H974 415 aaKnown RBP23.39■■□□□ 1.33
SSBP2-207ENST00000507472 SIRT1Q96EB6 747 aa23.38■■□□□ 1.33
SSBP2-207ENST00000507472 CDC42BPGQ6DT37 1551 aa23.38■■□□□ 1.33
SSBP2-207ENST00000507472 XPCQ01831 940 aaPredicted RBP23.37■■□□□ 1.33
SSBP2-207ENST00000507472 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
SSBP2-207ENST00000507472 NRXN1Q9ULB1 1477 aa23.35■■□□□ 1.33
SSBP2-207ENST00000507472 UPF1Q92900 1129 aaKnown RBP eCLIP23.33■■□□□ 1.33
SSBP2-207ENST00000507472 MYOM2P54296 1465 aa23.32■■□□□ 1.32
SSBP2-207ENST00000507472 RBM6P78332 1123 aaKnown RBP23.32■■□□□ 1.32
SSBP2-207ENST00000507472 HRCP23327 699 aa23.31■■□□□ 1.32
SSBP2-207ENST00000507472 PXDNQ92626 1479 aa23.3■■□□□ 1.32
SSBP2-207ENST00000507472 CDK12Q9NYV4 1490 aaPredicted RBP23.3■■□□□ 1.32
SSBP2-207ENST00000507472 SAFB2Q14151 953 aaKnown RBP eCLIP23.3■■□□□ 1.32
SSBP2-207ENST00000507472 PRAM1Q96QH2 718 aa23.3■■□□□ 1.32
SSBP2-207ENST00000507472 USP21Q9UK80 565 aa23.3■■□□□ 1.32
SSBP2-207ENST00000507472 KDM2AQ9Y2K7 1162 aa23.3■■□□□ 1.32
SSBP2-207ENST00000507472 KNDC1Q76NI1 1749 aa23.3■■□□□ 1.32
SSBP2-207ENST00000507472 FNBP4Q8N3X1 1017 aaPredicted RBP23.29■■□□□ 1.32
SSBP2-207ENST00000507472 DCAF11Q8TEB1 546 aa23.27■■□□□ 1.32
SSBP2-207ENST00000507472 POGKQ9P215 609 aa23.27■■□□□ 1.32
SSBP2-207ENST00000507472 KRT28Q7Z3Y7 464 aa23.26■■□□□ 1.31
SSBP2-207ENST00000507472 TRPC5Q9UL62 973 aaPredicted RBP23.25■■□□□ 1.31
SSBP2-207ENST00000507472 COL22A1Q8NFW1 1626 aaPredicted RBP23.24■■□□□ 1.31
SSBP2-207ENST00000507472 PHF8Q9UPP1 1060 aa23.24■■□□□ 1.31
SSBP2-207ENST00000507472 TRAK1Q9UPV9 953 aa23.24■■□□□ 1.31
SSBP2-207ENST00000507472 SPATA31A3Q5VYP0 1347 aa23.24■■□□□ 1.31
SSBP2-207ENST00000507472 FMN2Q9NZ56 1722 aa23.23■■□□□ 1.31
SSBP2-207ENST00000507472 RGS12O14924 1447 aa23.23■■□□□ 1.31
SSBP2-207ENST00000507472 STAC3Q96MF2 364 aa23.21■■□□□ 1.31
SSBP2-207ENST00000507472 PSME1Q06323 249 aa23.19■■□□□ 1.3
SSBP2-207ENST00000507472 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
SSBP2-207ENST00000507472 DLC1Q96QB1 1528 aa23.18■■□□□ 1.3
SSBP2-207ENST00000507472 HIRIP3Q9BW71 556 aaPredicted RBP23.18■■□□□ 1.3
SSBP2-207ENST00000507472 PMFBP1Q8TBY8 1022 aa23.17■■□□□ 1.3
SSBP2-207ENST00000507472 BCL9LQ86UU0 1499 aa23.17■■□□□ 1.3
SSBP2-207ENST00000507472 ATRNO75882 1429 aa23.16■■□□□ 1.3
SSBP2-207ENST00000507472 MINK1Q8N4C8 1332 aaPredicted RBP23.16■■□□□ 1.3
SSBP2-207ENST00000507472 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
SSBP2-207ENST00000507472 RGPD8O14715 1765 aaPredicted RBP23.14■■□□□ 1.3
SSBP2-207ENST00000507472 PLEKHG5O94827 1062 aa23.14■■□□□ 1.29
SSBP2-207ENST00000507472 CABLES1Q8TDN4 633 aa23.14■■□□□ 1.29
SSBP2-207ENST00000507472 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
SSBP2-207ENST00000507472 HAP1P54257 671 aaPredicted RBP23.12■■□□□ 1.29
SSBP2-207ENST00000507472 ANKARQ7Z5J8 1434 aa23.12■■□□□ 1.29
SSBP2-207ENST00000507472 GJD4Q96KN9 370 aaPredicted RBP23.12■■□□□ 1.29
SSBP2-207ENST00000507472 SBNO1A3KN83 1393 aa23.12■■□□□ 1.29
SSBP2-207ENST00000507472 TNS3Q68CZ2 1445 aa23.11■■□□□ 1.29
SSBP2-207ENST00000507472 WASLO00401 505 aaPredicted RBP23.11■■□□□ 1.29
SSBP2-207ENST00000507472 UNC5CLQ8IV45 518 aa23.1■■□□□ 1.29
SSBP2-207ENST00000507472 PRR36Q9H6K5 1346 aa23.09■■□□□ 1.29
SSBP2-207ENST00000507472 ATAD2Q6PL18 1390 aa23.07■■□□□ 1.28
SSBP2-207ENST00000507472 MARF1Q9Y4F3 1742 aaKnown RBP23.07■■□□□ 1.28
SSBP2-207ENST00000507472 USP32Q8NFA0 1604 aa23.07■■□□□ 1.28
SSBP2-207ENST00000507472 ADGRB2O60241 1585 aa23.06■■□□□ 1.28
SSBP2-207ENST00000507472 ARHGEF10O15013 1369 aa23.06■■□□□ 1.28
SSBP2-207ENST00000507472 SLIT2O94813 1529 aa23.06■■□□□ 1.28
SSBP2-207ENST00000507472 EIF3AQ14152 1382 aaKnown RBP23.05■■□□□ 1.28
SSBP2-207ENST00000507472 GPRASP1Q5JY77 1395 aa23.03■■□□□ 1.28
SSBP2-207ENST00000507472 NGDNQ8NEJ9 315 aaKnown RBP23.03■■□□□ 1.28
SSBP2-207ENST00000507472 FAM83GA6ND36 823 aa23.02■■□□□ 1.28
SSBP2-207ENST00000507472 EP400Q96L91 3159 aa23.01■■□□□ 1.27
SSBP2-207ENST00000507472 NBPF1Q3BBV0 1214 aa23.01■■□□□ 1.27
SSBP2-207ENST00000507472 NUDT16Q96DE0 195 aaKnown RBP23.01■■□□□ 1.27
SSBP2-207ENST00000507472 TULP4Q9NRJ4 1543 aa23.01■■□□□ 1.27
SSBP2-207ENST00000507472 RALGAPBQ86X10 1494 aa23■■□□□ 1.27
SSBP2-207ENST00000507472 VPS72Q15906 364 aa22.99■■□□□ 1.27
SSBP2-207ENST00000507472 CDK19Q9BWU1 502 aa22.99■■□□□ 1.27
SSBP2-207ENST00000507472 PAK3O75914 559 aaPredicted RBP22.98■■□□□ 1.27
SSBP2-207ENST00000507472 CCDC9Q9Y3X0 531 aaKnown RBP22.97■■□□□ 1.27
SSBP2-207ENST00000507472 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.96■■□□□ 1.27
SSBP2-207ENST00000507472 GLI3P10071 1580 aa22.96■■□□□ 1.27
SSBP2-207ENST00000507472 SEPT12Q8IYM1 358 aa22.95■■□□□ 1.26
SSBP2-207ENST00000507472 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
SSBP2-207ENST00000507472 CCDC125Q86Z20 511 aa22.94■■□□□ 1.26
SSBP2-207ENST00000507472 TRPM3Q9HCF6 1732 aaPredicted RBP22.94■■□□□ 1.26
SSBP2-207ENST00000507472 ONECUT3O60422 494 aaPredicted RBP22.93■■□□□ 1.26
SSBP2-207ENST00000507472 BTG4Q9NY30 223 aa22.93■■□□□ 1.26
SSBP2-207ENST00000507472 CCDC61Q9Y6R9 512 aa22.93■■□□□ 1.26
SSBP2-207ENST00000507472 ATP7BP35670 1465 aa22.92■■□□□ 1.26
SSBP2-207ENST00000507472 SRCAPQ6ZRS2 3230 aa22.91■■□□□ 1.26
SSBP2-207ENST00000507472 L3MBTL2Q969R5 705 aa22.9■■□□□ 1.26
SSBP2-207ENST00000507472 ABCA3Q99758 1704 aa22.9■■□□□ 1.26
SSBP2-207ENST00000507472 ALS2Q96Q42 1657 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms