RNA–Protein interactions for RNA: ENST00000507342.5

PPARGC1A-205, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 3

Gene PPARGC1A, Length 359 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-205ENST00000507342 MSH6P52701 1360 aa16.96■□□□□ 0.31
PPARGC1A-205ENST00000507342 RALGAPBQ86X10 1494 aa16.95■□□□□ 0.3
PPARGC1A-205ENST00000507342 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
PPARGC1A-205ENST00000507342 STK26Q9P289 416 aa16.95■□□□□ 0.3
PPARGC1A-205ENST00000507342 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
PPARGC1A-205ENST00000507342 NBPF1Q3BBV0 1214 aa16.94■□□□□ 0.3
PPARGC1A-205ENST00000507342 GPRASP1Q5JY77 1395 aa16.93■□□□□ 0.3
PPARGC1A-205ENST00000507342 UBAP1LF5GYI3 381 aa16.93■□□□□ 0.3
PPARGC1A-205ENST00000507342 CCER1Q8TC90 406 aaPredicted RBP16.93■□□□□ 0.3
PPARGC1A-205ENST00000507342 ROBO1Q9Y6N7 1651 aa16.92■□□□□ 0.3
PPARGC1A-205ENST00000507342 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
PPARGC1A-205ENST00000507342 MST1RQ04912 1400 aa16.92■□□□□ 0.3
PPARGC1A-205ENST00000507342 FMN2Q9NZ56 1722 aa16.92■□□□□ 0.3
PPARGC1A-205ENST00000507342 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
PPARGC1A-205ENST00000507342 SIRT1Q96EB6 747 aa16.91■□□□□ 0.3
PPARGC1A-205ENST00000507342 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
PPARGC1A-205ENST00000507342 TOM1O60784 492 aa16.89■□□□□ 0.29
PPARGC1A-205ENST00000507342 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
PPARGC1A-205ENST00000507342 C14orf37Q86TY3 774 aa16.88■□□□□ 0.29
PPARGC1A-205ENST00000507342 PRAM1Q96QH2 718 aa16.88■□□□□ 0.29
PPARGC1A-205ENST00000507342 TRAK1Q9UPV9 953 aa16.88■□□□□ 0.29
PPARGC1A-205ENST00000507342 ROCK2O75116 1388 aaKnown RBP16.87■□□□□ 0.29
PPARGC1A-205ENST00000507342 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
PPARGC1A-205ENST00000507342 CADPS2Q86UW7 1296 aa16.85■□□□□ 0.29
PPARGC1A-205ENST00000507342 TIMELESSQ9UNS1 1208 aa16.85■□□□□ 0.29
PPARGC1A-205ENST00000507342 C1orf167Q5SNV9 1468 aa16.85■□□□□ 0.29
PPARGC1A-205ENST00000507342 NHSL1Q5SYE7 1610 aa16.85■□□□□ 0.29
PPARGC1A-205ENST00000507342 PIP4K2BP78356 416 aa16.84■□□□□ 0.29
PPARGC1A-205ENST00000507342 AHDC1Q5TGY3 1603 aaPredicted RBP16.83■□□□□ 0.28
PPARGC1A-205ENST00000507342 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
PPARGC1A-205ENST00000507342 ATF3P18847 181 aa16.82■□□□□ 0.28
PPARGC1A-205ENST00000507342 SAFB2Q14151 953 aaKnown RBP eCLIP16.82■□□□□ 0.28
PPARGC1A-205ENST00000507342 SLAIN2Q9P270 581 aa16.82■□□□□ 0.28
PPARGC1A-205ENST00000507342 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
PPARGC1A-205ENST00000507342 TULP4Q9NRJ4 1543 aa16.81■□□□□ 0.28
PPARGC1A-205ENST00000507342 C1QBPQ07021 282 aaKnown RBP16.8■□□□□ 0.28
PPARGC1A-205ENST00000507342 POGKQ9P215 609 aa16.8■□□□□ 0.28
PPARGC1A-205ENST00000507342 TOPAZ1Q8N9V7 1692 aa16.8■□□□□ 0.28
PPARGC1A-205ENST00000507342 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
PPARGC1A-205ENST00000507342 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
PPARGC1A-205ENST00000507342 MINK1Q8N4C8 1332 aaPredicted RBP16.78■□□□□ 0.28
PPARGC1A-205ENST00000507342 BRINP3Q76B58 766 aa16.78■□□□□ 0.28
PPARGC1A-205ENST00000507342 ATP7BP35670 1465 aa16.78■□□□□ 0.28
PPARGC1A-205ENST00000507342 ANKARQ7Z5J8 1434 aa16.78■□□□□ 0.28
PPARGC1A-205ENST00000507342 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
PPARGC1A-205ENST00000507342 HSPA1LP34931 641 aa16.77■□□□□ 0.28
PPARGC1A-205ENST00000507342 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
PPARGC1A-205ENST00000507342 CARD11Q9BXL7 1154 aa16.76■□□□□ 0.27
PPARGC1A-205ENST00000507342 ITSN1Q15811 1721 aa16.76■□□□□ 0.27
PPARGC1A-205ENST00000507342 EIF3AQ14152 1382 aaKnown RBP16.76■□□□□ 0.27
PPARGC1A-205ENST00000507342 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
PPARGC1A-205ENST00000507342 SBNO2Q9Y2G9 1366 aa16.75■□□□□ 0.27
PPARGC1A-205ENST00000507342 WASLO00401 505 aaPredicted RBP16.73■□□□□ 0.27
PPARGC1A-205ENST00000507342 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
PPARGC1A-205ENST00000507342 NUTM2FA1L443 756 aa16.72■□□□□ 0.27
PPARGC1A-205ENST00000507342 USP47Q96K76 1375 aa16.71■□□□□ 0.27
PPARGC1A-205ENST00000507342 PXDNQ92626 1479 aa16.71■□□□□ 0.27
PPARGC1A-205ENST00000507342 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
PPARGC1A-205ENST00000507342 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
PPARGC1A-205ENST00000507342 TRPM3Q9HCF6 1732 aaPredicted RBP16.68■□□□□ 0.26
PPARGC1A-205ENST00000507342 ESCO1Q5FWF5 840 aa16.67■□□□□ 0.26
PPARGC1A-205ENST00000507342 TESK2Q96S53 571 aa16.67■□□□□ 0.26
PPARGC1A-205ENST00000507342 CDK19Q9BWU1 502 aa16.67■□□□□ 0.26
PPARGC1A-205ENST00000507342 SOS2Q07890 1332 aaPredicted RBP16.66■□□□□ 0.26
PPARGC1A-205ENST00000507342 COL22A1Q8NFW1 1626 aaPredicted RBP16.64■□□□□ 0.25
PPARGC1A-205ENST00000507342 ST20-MTHFSA0A0A6YYL1 179 aa16.64■□□□□ 0.25
PPARGC1A-205ENST00000507342 NUDT16Q96DE0 195 aaKnown RBP16.64■□□□□ 0.25
PPARGC1A-205ENST00000507342 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
PPARGC1A-205ENST00000507342 CABP2Q9NPB3 220 aa16.63■□□□□ 0.25
PPARGC1A-205ENST00000507342 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
PPARGC1A-205ENST00000507342 MED1Q15648 1581 aaPredicted RBP16.63■□□□□ 0.25
PPARGC1A-205ENST00000507342 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
PPARGC1A-205ENST00000507342 AKAP12Q02952 1782 aa16.62■□□□□ 0.25
PPARGC1A-205ENST00000507342 EVC2Q86UK5 1308 aa16.62■□□□□ 0.25
PPARGC1A-205ENST00000507342 JCADQ9P266 1359 aa16.62■□□□□ 0.25
PPARGC1A-205ENST00000507342 PPIP5K1Q6PFW1 1433 aa16.62■□□□□ 0.25
PPARGC1A-205ENST00000507342 FOXO3O43524 673 aa16.61■□□□□ 0.25
PPARGC1A-205ENST00000507342 POLR3AO14802 1390 aaPredicted RBP16.61■□□□□ 0.25
PPARGC1A-205ENST00000507342 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
PPARGC1A-205ENST00000507342 DISP3Q9P2K9 1392 aa16.61■□□□□ 0.25
PPARGC1A-205ENST00000507342 NRKQ7Z2Y5 1582 aa16.6■□□□□ 0.25
PPARGC1A-205ENST00000507342 LRP6O75581 1613 aa16.6■□□□□ 0.25
PPARGC1A-205ENST00000507342 ABCA3Q99758 1704 aa16.6■□□□□ 0.25
PPARGC1A-205ENST00000507342 SRPK2P78362 688 aaKnown RBP16.6■□□□□ 0.25
PPARGC1A-205ENST00000507342 XPCQ01831 940 aaPredicted RBP16.6■□□□□ 0.25
PPARGC1A-205ENST00000507342 PMFBP1Q8TBY8 1022 aa16.6■□□□□ 0.25
PPARGC1A-205ENST00000507342 MYOM1P52179 1685 aa16.59■□□□□ 0.25
PPARGC1A-205ENST00000507342 MON2Q7Z3U7 1717 aa16.59■□□□□ 0.25
PPARGC1A-205ENST00000507342 CRYBG1Q9Y4K1 1723 aa16.59■□□□□ 0.25
PPARGC1A-205ENST00000507342 CCDC61Q9Y6R9 512 aa16.59■□□□□ 0.25
PPARGC1A-205ENST00000507342 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
PPARGC1A-205ENST00000507342 ATAD2Q6PL18 1390 aa16.58■□□□□ 0.24
PPARGC1A-205ENST00000507342 TNS3Q68CZ2 1445 aa16.58■□□□□ 0.24
PPARGC1A-205ENST00000507342 CD163L1Q9NR16 1453 aa16.58■□□□□ 0.24
PPARGC1A-205ENST00000507342 SBNO1A3KN83 1393 aa16.57■□□□□ 0.24
PPARGC1A-205ENST00000507342 ACEP12821 1306 aa16.55■□□□□ 0.24
PPARGC1A-205ENST00000507342 SPATA31A3Q5VYP0 1347 aa16.55■□□□□ 0.24
PPARGC1A-205ENST00000507342 HSPA5P11021 654 aaKnown RBP16.55■□□□□ 0.24
PPARGC1A-205ENST00000507342 KRT28Q7Z3Y7 464 aa16.55■□□□□ 0.24
PPARGC1A-205ENST00000507342 CPSF1Q10570 1443 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms