RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 RPGRIP1LQ68CZ1 1315 aa20.26■□□□□ 0.83
DDX41-206ENST00000506965 PXDNQ92626 1479 aa20.25■□□□□ 0.83
DDX41-206ENST00000506965 RGPD8O14715 1765 aaPredicted RBP20.25■□□□□ 0.83
DDX41-206ENST00000506965 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
DDX41-206ENST00000506965 TECPR2O15040 1411 aa20.23■□□□□ 0.83
DDX41-206ENST00000506965 ADAMTS2O95450 1211 aa20.23■□□□□ 0.83
DDX41-206ENST00000506965 FMN2Q9NZ56 1722 aa20.23■□□□□ 0.83
DDX41-206ENST00000506965 EP400Q96L91 3159 aa20.23■□□□□ 0.83
DDX41-206ENST00000506965 MYOM2P54296 1465 aa20.23■□□□□ 0.83
DDX41-206ENST00000506965 QTRT2Q9H974 415 aaKnown RBP20.21■□□□□ 0.83
DDX41-206ENST00000506965 PIK3C2GO75747 1445 aa20.19■□□□□ 0.82
DDX41-206ENST00000506965 WAPLQ7Z5K2 1190 aa20.19■□□□□ 0.82
DDX41-206ENST00000506965 RBM6P78332 1123 aaKnown RBP20.17■□□□□ 0.82
DDX41-206ENST00000506965 CCDC144AA2RUR9 1427 aa20.17■□□□□ 0.82
DDX41-206ENST00000506965 XPCQ01831 940 aaPredicted RBP20.16■□□□□ 0.82
DDX41-206ENST00000506965 RGL3Q3MIN7 710 aa20.16■□□□□ 0.82
DDX41-206ENST00000506965 TMEM132EQ6IEE7 984 aa20.16■□□□□ 0.82
DDX41-206ENST00000506965 LRPPRCP42704 1394 aaKnown RBP20.16■□□□□ 0.82
DDX41-206ENST00000506965 ATRNO75882 1429 aa20.16■□□□□ 0.82
DDX41-206ENST00000506965 SRCAPQ6ZRS2 3230 aa20.15■□□□□ 0.82
DDX41-206ENST00000506965 FNBP4Q8N3X1 1017 aaPredicted RBP20.15■□□□□ 0.82
DDX41-206ENST00000506965 NGLY1Q96IV0 654 aa20.15■□□□□ 0.82
DDX41-206ENST00000506965 BCL9LQ86UU0 1499 aa20.15■□□□□ 0.82
DDX41-206ENST00000506965 NUTM2FA1L443 756 aa20.14■□□□□ 0.81
DDX41-206ENST00000506965 MPHOSPH9Q99550 1183 aa20.14■□□□□ 0.81
DDX41-206ENST00000506965 STK26Q9P289 416 aa20.14■□□□□ 0.81
DDX41-206ENST00000506965 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.13■□□□□ 0.81
DDX41-206ENST00000506965 NRXN1Q9ULB1 1477 aa20.13■□□□□ 0.81
DDX41-206ENST00000506965 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
DDX41-206ENST00000506965 ABCA3Q99758 1704 aa20.13■□□□□ 0.81
DDX41-206ENST00000506965 FOXO3O43524 673 aa20.12■□□□□ 0.81
DDX41-206ENST00000506965 ESCO1Q5FWF5 840 aa20.12■□□□□ 0.81
DDX41-206ENST00000506965 USP32Q8NFA0 1604 aa20.12■□□□□ 0.81
DDX41-206ENST00000506965 YTHDC2Q9H6S0 1430 aaKnown RBP20.11■□□□□ 0.81
DDX41-206ENST00000506965 ANKRD30BQ9BXX2 1392 aa20.11■□□□□ 0.81
DDX41-206ENST00000506965 KIF1AQ12756 1690 aa20.11■□□□□ 0.81
DDX41-206ENST00000506965 USP21Q9UK80 565 aa20.11■□□□□ 0.81
DDX41-206ENST00000506965 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
DDX41-206ENST00000506965 GLI3P10071 1580 aa20.1■□□□□ 0.81
DDX41-206ENST00000506965 NPHP3Q7Z494 1330 aa20.09■□□□□ 0.81
DDX41-206ENST00000506965 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
DDX41-206ENST00000506965 PLCH1Q4KWH8 1693 aa20.05■□□□□ 0.8
DDX41-206ENST00000506965 SLIT2O94813 1529 aa20.05■□□□□ 0.8
DDX41-206ENST00000506965 ADGRB1O14514 1584 aa20.04■□□□□ 0.8
DDX41-206ENST00000506965 SPATA31A3Q5VYP0 1347 aa20.03■□□□□ 0.8
DDX41-206ENST00000506965 CFAP70Q5T0N1 1121 aa20.03■□□□□ 0.8
DDX41-206ENST00000506965 C14orf93Q9H972 538 aaKnown RBP20.03■□□□□ 0.8
DDX41-206ENST00000506965 TRPM3Q9HCF6 1732 aaPredicted RBP20.02■□□□□ 0.8
DDX41-206ENST00000506965 ATAD2Q6PL18 1390 aa20.01■□□□□ 0.79
DDX41-206ENST00000506965 ADGRB2O60241 1585 aa20■□□□□ 0.79
DDX41-206ENST00000506965 RALGAPBQ86X10 1494 aa20■□□□□ 0.79
DDX41-206ENST00000506965 CRYBG1Q9Y4K1 1723 aa19.99■□□□□ 0.79
DDX41-206ENST00000506965 DLC1Q96QB1 1528 aa19.99■□□□□ 0.79
DDX41-206ENST00000506965 NRAPQ86VF7 1730 aa19.98■□□□□ 0.79
DDX41-206ENST00000506965 NWD2Q9ULI1 1742 aa19.98■□□□□ 0.79
DDX41-206ENST00000506965 ALS2Q96Q42 1657 aa19.97■□□□□ 0.79
DDX41-206ENST00000506965 RAB3GAP2Q9H2M9 1393 aa19.97■□□□□ 0.79
DDX41-206ENST00000506965 TNS3Q68CZ2 1445 aa19.97■□□□□ 0.79
DDX41-206ENST00000506965 KRT28Q7Z3Y7 464 aa19.97■□□□□ 0.79
DDX41-206ENST00000506965 CABLES1Q8TDN4 633 aa19.97■□□□□ 0.79
DDX41-206ENST00000506965 SIRT1Q96EB6 747 aa19.97■□□□□ 0.79
DDX41-206ENST00000506965 GJD4Q96KN9 370 aaPredicted RBP19.97■□□□□ 0.79
DDX41-206ENST00000506965 SAFB2Q14151 953 aaKnown RBP eCLIP19.95■□□□□ 0.78
DDX41-206ENST00000506965 PRAM1Q96QH2 718 aa19.95■□□□□ 0.78
DDX41-206ENST00000506965 PHF8Q9UPP1 1060 aa19.94■□□□□ 0.78
DDX41-206ENST00000506965 UNC5CLQ8IV45 518 aa19.93■□□□□ 0.78
DDX41-206ENST00000506965 ARHGEF28Q8N1W1 1705 aaKnown RBP19.93■□□□□ 0.78
DDX41-206ENST00000506965 PRR36Q9H6K5 1346 aa19.92■□□□□ 0.78
DDX41-206ENST00000506965 DHX57Q6P158 1386 aaKnown RBP19.92■□□□□ 0.78
DDX41-206ENST00000506965 SBNO1A3KN83 1393 aa19.9■□□□□ 0.78
DDX41-206ENST00000506965 PLEKHG5O94827 1062 aa19.89■□□□□ 0.77
DDX41-206ENST00000506965 PMFBP1Q8TBY8 1022 aa19.89■□□□□ 0.77
DDX41-206ENST00000506965 ANKARQ7Z5J8 1434 aa19.88■□□□□ 0.77
DDX41-206ENST00000506965 HIRIP3Q9BW71 556 aaPredicted RBP19.87■□□□□ 0.77
DDX41-206ENST00000506965 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
DDX41-206ENST00000506965 TRAK1Q9UPV9 953 aa19.85■□□□□ 0.77
DDX41-206ENST00000506965 FAM83GA6ND36 823 aa19.84■□□□□ 0.77
DDX41-206ENST00000506965 VPS72Q15906 364 aa19.84■□□□□ 0.77
DDX41-206ENST00000506965 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.77
DDX41-206ENST00000506965 MINK1Q8N4C8 1332 aaPredicted RBP19.83■□□□□ 0.77
DDX41-206ENST00000506965 DEFB132Q7Z7B7 95 aa19.83■□□□□ 0.77
DDX41-206ENST00000506965 SEPT12Q8IYM1 358 aa19.83■□□□□ 0.77
DDX41-206ENST00000506965 BLMP54132 1417 aaPredicted RBP19.83■□□□□ 0.76
DDX41-206ENST00000506965 TOPAZ1Q8N9V7 1692 aa19.82■□□□□ 0.76
DDX41-206ENST00000506965 ONECUT3O60422 494 aaPredicted RBP19.82■□□□□ 0.76
DDX41-206ENST00000506965 PHRF1Q9P1Y6 1649 aaKnown RBP19.82■□□□□ 0.76
DDX41-206ENST00000506965 ARHGEF10O15013 1369 aa19.82■□□□□ 0.76
DDX41-206ENST00000506965 ATP7BP35670 1465 aa19.81■□□□□ 0.76
DDX41-206ENST00000506965 ITSN1Q15811 1721 aa19.81■□□□□ 0.76
DDX41-206ENST00000506965 PSME1Q06323 249 aa19.8■□□□□ 0.76
DDX41-206ENST00000506965 LMOD2Q6P5Q4 547 aa19.8■□□□□ 0.76
DDX41-206ENST00000506965 POGKQ9P215 609 aa19.8■□□□□ 0.76
DDX41-206ENST00000506965 KDM2AQ9Y2K7 1162 aa19.8■□□□□ 0.76
DDX41-206ENST00000506965 THSD7AQ9UPZ6 1657 aa19.8■□□□□ 0.76
DDX41-206ENST00000506965 ACIN1Q9UKV3 1341 aaKnown RBP19.79■□□□□ 0.76
DDX41-206ENST00000506965 CCDC125Q86Z20 511 aa19.78■□□□□ 0.76
DDX41-206ENST00000506965 DCAF11Q8TEB1 546 aa19.78■□□□□ 0.76
DDX41-206ENST00000506965 TNS1Q9HBL0 1735 aaKnown RBP19.78■□□□□ 0.76
DDX41-206ENST00000506965 WASLO00401 505 aaPredicted RBP19.77■□□□□ 0.76
DDX41-206ENST00000506965 ZRANB1Q9UGI0 708 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms