RNA–Protein interactions for RNA: ENST00000506437.1

ITGA3-208, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 3,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-208ENST00000506437 YTHDC2Q9H6S0 1430 aaKnown RBP15.59■□□□□ 0.09
ITGA3-208ENST00000506437 NRXN3Q9Y4C0 1643 aa15.59■□□□□ 0.09
ITGA3-208ENST00000506437 NEURL4Q96JN8 1562 aa15.58■□□□□ 0.09
ITGA3-208ENST00000506437 TMC1Q8TDI8 760 aa15.58■□□□□ 0.08
ITGA3-208ENST00000506437 KCNA6P17658 529 aa15.58■□□□□ 0.08
ITGA3-208ENST00000506437 FANCIQ9NVI1 1328 aa15.57■□□□□ 0.08
ITGA3-208ENST00000506437 TMF1P82094 1093 aa15.56■□□□□ 0.08
ITGA3-208ENST00000506437 PLEKHG1Q9ULL1 1385 aa15.56■□□□□ 0.08
ITGA3-208ENST00000506437 PTPRUQ92729 1446 aa15.56■□□□□ 0.08
ITGA3-208ENST00000506437 SRPK2P78362 688 aaKnown RBP15.55■□□□□ 0.08
ITGA3-208ENST00000506437 ROBO2Q9HCK4 1378 aa15.55■□□□□ 0.08
ITGA3-208ENST00000506437 ARHGAP23Q9P227 1491 aa15.55■□□□□ 0.08
ITGA3-208ENST00000506437 SLIT1O75093 1534 aa15.54■□□□□ 0.08
ITGA3-208ENST00000506437 SLC12A5Q9H2X9 1139 aa15.53■□□□□ 0.08
ITGA3-208ENST00000506437 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.07
ITGA3-208ENST00000506437 EIF3AQ14152 1382 aaKnown RBP15.52■□□□□ 0.07
ITGA3-208ENST00000506437 C14orf37Q86TY3 774 aa15.51■□□□□ 0.07
ITGA3-208ENST00000506437 PANK3Q9H999 370 aa15.51■□□□□ 0.07
ITGA3-208ENST00000506437 KIAA1210Q9ULL0 1709 aa15.5■□□□□ 0.07
ITGA3-208ENST00000506437 NPHP4O75161 1426 aaPredicted RBP15.5■□□□□ 0.07
ITGA3-208ENST00000506437 TBX22Q9Y458 520 aa15.5■□□□□ 0.07
ITGA3-208ENST00000506437 SETD1AO15047 1707 aaKnown RBP15.5■□□□□ 0.07
ITGA3-208ENST00000506437 CDK19Q9BWU1 502 aa15.49■□□□□ 0.07
ITGA3-208ENST00000506437 ZNF142P52746 1687 aaPredicted RBP15.49■□□□□ 0.07
ITGA3-208ENST00000506437 ARHGEF28Q8N1W1 1705 aaKnown RBP15.49■□□□□ 0.07
ITGA3-208ENST00000506437 LRPPRCP42704 1394 aaKnown RBP15.49■□□□□ 0.07
ITGA3-208ENST00000506437 SENP3-EIF4A1A0A087X0R7 540 aa15.49■□□□□ 0.07
ITGA3-208ENST00000506437 CC2D1BQ5T0F9 858 aaKnown RBP15.49■□□□□ 0.07
ITGA3-208ENST00000506437 SETBP1Q9Y6X0 1596 aa15.48■□□□□ 0.07
ITGA3-208ENST00000506437 QRICH2Q9H0J4 1663 aa15.48■□□□□ 0.07
ITGA3-208ENST00000506437 NEFLP07196 543 aa15.47■□□□□ 0.07
ITGA3-208ENST00000506437 KDM5AP29375 1690 aaKnown RBP15.47■□□□□ 0.07
ITGA3-208ENST00000506437 PAK3O75914 559 aaPredicted RBP15.47■□□□□ 0.07
ITGA3-208ENST00000506437 ZNF335Q9H4Z2 1342 aaPredicted RBP15.46■□□□□ 0.07
ITGA3-208ENST00000506437 ABCC11Q96J66 1382 aa15.45■□□□□ 0.06
ITGA3-208ENST00000506437 LAMC1P11047 1609 aa15.45■□□□□ 0.06
ITGA3-208ENST00000506437 CABP1Q9NZU7 370 aa15.45■□□□□ 0.06
ITGA3-208ENST00000506437 PMFBP1Q8TBY8 1022 aa15.44■□□□□ 0.06
ITGA3-208ENST00000506437 EVC2Q86UK5 1308 aa15.44■□□□□ 0.06
ITGA3-208ENST00000506437 MED14O60244 1454 aa15.44■□□□□ 0.06
ITGA3-208ENST00000506437 TNNT2P45379 298 aaPredicted RBP15.44■□□□□ 0.06
ITGA3-208ENST00000506437 PROSER2Q86WR7 435 aaPredicted RBP15.44■□□□□ 0.06
ITGA3-208ENST00000506437 TULP4Q9NRJ4 1543 aa15.43■□□□□ 0.06
ITGA3-208ENST00000506437 CCDC184Q52MB2 194 aa15.43■□□□□ 0.06
ITGA3-208ENST00000506437 ANP32CO43423 234 aa15.42■□□□□ 0.06
ITGA3-208ENST00000506437 IRX6P78412 446 aaPredicted RBP15.42■□□□□ 0.06
ITGA3-208ENST00000506437 WASLO00401 505 aaPredicted RBP15.41■□□□□ 0.06
ITGA3-208ENST00000506437 CARD14Q9BXL6 1004 aa15.41■□□□□ 0.06
ITGA3-208ENST00000506437 DAXXQ9UER7 740 aaPredicted RBP15.41■□□□□ 0.06
ITGA3-208ENST00000506437 POLR1AO95602 1720 aaPredicted RBP15.41■□□□□ 0.06
ITGA3-208ENST00000506437 PRR36Q9H6K5 1346 aa15.4■□□□□ 0.06
ITGA3-208ENST00000506437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.4■□□□□ 0.06
ITGA3-208ENST00000506437 STRCQ7RTU9 1775 aa15.4■□□□□ 0.06
ITGA3-208ENST00000506437 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.39■□□□□ 0.05
ITGA3-208ENST00000506437 FBLN1P23142 703 aa15.39■□□□□ 0.05
ITGA3-208ENST00000506437 XPCQ01831 940 aaPredicted RBP15.39■□□□□ 0.05
ITGA3-208ENST00000506437 NUDT16Q96DE0 195 aaKnown RBP15.39■□□□□ 0.05
ITGA3-208ENST00000506437 DDX17Q92841 729 aaKnown RBP15.37■□□□□ 0.05
ITGA3-208ENST00000506437 CDCA8Q53HL2 280 aa15.37■□□□□ 0.05
ITGA3-208ENST00000506437 PER1O15534 1290 aaPredicted RBP15.36■□□□□ 0.05
ITGA3-208ENST00000506437 SOX12O15370 315 aa15.36■□□□□ 0.05
ITGA3-208ENST00000506437 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
ITGA3-208ENST00000506437 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
ITGA3-208ENST00000506437 NOP58Q9Y2X3 529 aaKnown RBP15.35■□□□□ 0.05
ITGA3-208ENST00000506437 NUTM2GQ5VZR2 741 aa15.35■□□□□ 0.05
ITGA3-208ENST00000506437 PRKRIP1Q9H875 184 aaPredicted RBP15.35■□□□□ 0.05
ITGA3-208ENST00000506437 STRCP1A6NGW2 1772 aa15.34■□□□□ 0.05
ITGA3-208ENST00000506437 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
ITGA3-208ENST00000506437 CHD2O14647 1828 aaKnown RBP15.34■□□□□ 0.05
ITGA3-208ENST00000506437 TMEM94Q12767 1356 aa15.34■□□□□ 0.05
ITGA3-208ENST00000506437 GGNBP2Q9H3C7 697 aa15.34■□□□□ 0.05
ITGA3-208ENST00000506437 TECPR2O15040 1411 aa15.33■□□□□ 0.04
ITGA3-208ENST00000506437 ESCO1Q5FWF5 840 aa15.33■□□□□ 0.04
ITGA3-208ENST00000506437 SBNO2Q9Y2G9 1366 aa15.33■□□□□ 0.04
ITGA3-208ENST00000506437 CPS1P31327 1500 aa15.32■□□□□ 0.04
ITGA3-208ENST00000506437 A0A1W2PP64 1363 aa15.32■□□□□ 0.04
ITGA3-208ENST00000506437 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
ITGA3-208ENST00000506437 RGPD8O14715 1765 aaPredicted RBP15.32■□□□□ 0.04
ITGA3-208ENST00000506437 MYOM1P52179 1685 aa15.32■□□□□ 0.04
ITGA3-208ENST00000506437 ZMYND15Q9H091 742 aa15.32■□□□□ 0.04
ITGA3-208ENST00000506437 FAM135BQ49AJ0 1406 aa15.31■□□□□ 0.04
ITGA3-208ENST00000506437 PPIP5K1Q6PFW1 1433 aa15.31■□□□□ 0.04
ITGA3-208ENST00000506437 NSD3Q9BZ95 1437 aa15.31■□□□□ 0.04
ITGA3-208ENST00000506437 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
ITGA3-208ENST00000506437 DLC1Q96QB1 1528 aa15.31■□□□□ 0.04
ITGA3-208ENST00000506437 XRN1Q8IZH2 1706 aaKnown RBP15.3■□□□□ 0.04
ITGA3-208ENST00000506437 NGDNQ8NEJ9 315 aaKnown RBP15.3■□□□□ 0.04
ITGA3-208ENST00000506437 FOXO3O43524 673 aa15.3■□□□□ 0.04
ITGA3-208ENST00000506437 ACEP12821 1306 aa15.29■□□□□ 0.04
ITGA3-208ENST00000506437 FAM9BQ8IZU0 186 aa15.29■□□□□ 0.04
ITGA3-208ENST00000506437 VSIG10Q8N0Z9 540 aa15.29■□□□□ 0.04
ITGA3-208ENST00000506437 DIP2AQ14689 1571 aa15.29■□□□□ 0.04
ITGA3-208ENST00000506437 AMER1Q5JTC6 1135 aaPredicted RBP15.28■□□□□ 0.04
ITGA3-208ENST00000506437 LMOD2Q6P5Q4 547 aa15.28■□□□□ 0.04
ITGA3-208ENST00000506437 BRPF3Q9ULD4 1205 aa15.28■□□□□ 0.04
ITGA3-208ENST00000506437 PTCH1Q13635 1447 aa15.28■□□□□ 0.04
ITGA3-208ENST00000506437 NME9Q86XW9 330 aa15.28■□□□□ 0.04
ITGA3-208ENST00000506437 KNDC1Q76NI1 1749 aa15.27■□□□□ 0.04
ITGA3-208ENST00000506437 NALCNQ8IZF0 1738 aa15.27■□□□□ 0.04
ITGA3-208ENST00000506437 SIRT1Q96EB6 747 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms