RNA–Protein interactions for RNA: ENST00000506223.1

SMAD5-201, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-201ENST00000506223 TSR1Q2NL82 804 aaKnown RBP10.43□□□□□ -0.74
SMAD5-201ENST00000506223 ZNF710Q8N1W2 664 aa10.43□□□□□ -0.74
SMAD5-201ENST00000506223 PRXQ9BXM0 1461 aa10.42□□□□□ -0.74
SMAD5-201ENST00000506223 TRAPPC8Q9Y2L5 1435 aa10.42□□□□□ -0.74
SMAD5-201ENST00000506223 PLEKHD1A6NEE1 506 aa10.42□□□□□ -0.74
SMAD5-201ENST00000506223 GPR153Q6NV75 609 aa10.42□□□□□ -0.74
SMAD5-201ENST00000506223 ZNF454Q8N9F8 522 aa10.42□□□□□ -0.74
SMAD5-201ENST00000506223 NPDC1Q9NQX5 325 aaPredicted RBP10.42□□□□□ -0.74
SMAD5-201ENST00000506223 DIP2CQ9Y2E4 1556 aa10.41□□□□□ -0.74
SMAD5-201ENST00000506223 SUPT6HQ7KZ85 1726 aaKnown RBP10.41□□□□□ -0.74
SMAD5-201ENST00000506223 PIP4K2BP78356 416 aa10.4□□□□□ -0.74
SMAD5-201ENST00000506223 KDM4CQ9H3R0 1056 aa10.4□□□□□ -0.74
SMAD5-201ENST00000506223 EEA1Q15075 1411 aa10.4□□□□□ -0.75
SMAD5-201ENST00000506223 ABCA6Q8N139 1617 aa10.4□□□□□ -0.75
SMAD5-201ENST00000506223 ZDHHC16Q969W1 377 aa10.39□□□□□ -0.75
SMAD5-201ENST00000506223 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
SMAD5-201ENST00000506223 PLCH2O75038 1416 aa10.39□□□□□ -0.75
SMAD5-201ENST00000506223 KDM5CP41229 1560 aa10.39□□□□□ -0.75
SMAD5-201ENST00000506223 REREQ9P2R6 1566 aa10.39□□□□□ -0.75
SMAD5-201ENST00000506223 MYO5CQ9NQX4 1742 aa10.38□□□□□ -0.75
SMAD5-201ENST00000506223 RANGAP1P46060 587 aaPredicted RBP10.37□□□□□ -0.75
SMAD5-201ENST00000506223 AMHR2Q16671 573 aa10.37□□□□□ -0.75
SMAD5-201ENST00000506223 SNPHO15079 494 aa10.36□□□□□ -0.75
SMAD5-201ENST00000506223 C6orf132Q5T0Z8 1188 aa10.36□□□□□ -0.75
SMAD5-201ENST00000506223 AFAP1Q8N556 730 aa10.36□□□□□ -0.75
SMAD5-201ENST00000506223 ZNF142P52746 1687 aaPredicted RBP10.36□□□□□ -0.75
SMAD5-201ENST00000506223 CDK13Q14004 1512 aaKnown RBP10.36□□□□□ -0.75
SMAD5-201ENST00000506223 ZNF518AQ6AHZ1 1483 aa10.36□□□□□ -0.75
SMAD5-201ENST00000506223 AGLP35573 1532 aa10.35□□□□□ -0.75
SMAD5-201ENST00000506223 ADAM33Q9BZ11 813 aa10.35□□□□□ -0.75
SMAD5-201ENST00000506223 LHX6Q9UPM6 363 aa10.35□□□□□ -0.75
SMAD5-201ENST00000506223 MYO3AQ8NEV4 1616 aa10.35□□□□□ -0.75
SMAD5-201ENST00000506223 ALKQ9UM73 1620 aa10.35□□□□□ -0.75
SMAD5-201ENST00000506223 MROH2AA6NES4 1674 aa10.34□□□□□ -0.75
SMAD5-201ENST00000506223 ESF1Q9H501 851 aaKnown RBP10.34□□□□□ -0.75
SMAD5-201ENST00000506223 TCOF1Q13428 1488 aaKnown RBP10.34□□□□□ -0.75
SMAD5-201ENST00000506223 PARP9Q8IXQ6 854 aa10.33□□□□□ -0.76
SMAD5-201ENST00000506223 RGS17Q9UGC6 210 aaPredicted RBP10.33□□□□□ -0.76
SMAD5-201ENST00000506223 MYT1LQ9UL68 1186 aa10.33□□□□□ -0.76
SMAD5-201ENST00000506223 PLA2R1Q13018 1463 aa10.33□□□□□ -0.76
SMAD5-201ENST00000506223 NPATQ14207 1427 aa10.33□□□□□ -0.76
SMAD5-201ENST00000506223 TOM1O60784 492 aa10.32□□□□□ -0.76
SMAD5-201ENST00000506223 TTLL12Q14166 644 aaPredicted RBP10.32□□□□□ -0.76
SMAD5-201ENST00000506223 PPP4R3BQ5MIZ7 849 aa10.32□□□□□ -0.76
SMAD5-201ENST00000506223 EFCAB2Q5VUJ9 269 aa10.32□□□□□ -0.76
SMAD5-201ENST00000506223 IL27Q8NEV9 243 aa10.32□□□□□ -0.76
SMAD5-201ENST00000506223 DAXXQ9UER7 740 aaPredicted RBP10.32□□□□□ -0.76
SMAD5-201ENST00000506223 KIF14Q15058 1648 aa10.32□□□□□ -0.76
SMAD5-201ENST00000506223 CNTLNQ9NXG0 1405 aa10.32□□□□□ -0.76
SMAD5-201ENST00000506223 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
SMAD5-201ENST00000506223 PSDA5PKW4 1024 aaPredicted RBP10.31□□□□□ -0.76
SMAD5-201ENST00000506223 OTUD5Q96G74 571 aa10.31□□□□□ -0.76
SMAD5-201ENST00000506223 KIDINS220Q9ULH0 1771 aa10.3□□□□□ -0.76
SMAD5-201ENST00000506223 HOXB1P14653 301 aaPredicted RBP10.3□□□□□ -0.76
SMAD5-201ENST00000506223 UBTFP17480 764 aaKnown RBP10.3□□□□□ -0.76
SMAD5-201ENST00000506223 PADI6Q6TGC4 694 aa10.3□□□□□ -0.76
SMAD5-201ENST00000506223 CLTCQ00610 1675 aaKnown RBP10.3□□□□□ -0.76
SMAD5-201ENST00000506223 POLR1AO95602 1720 aaPredicted RBP10.3□□□□□ -0.76
SMAD5-201ENST00000506223 MLH3Q9UHC1 1453 aa10.3□□□□□ -0.76
SMAD5-201ENST00000506223 CPS1P31327 1500 aa10.29□□□□□ -0.76
SMAD5-201ENST00000506223 ARHGAP5Q13017 1502 aa10.29□□□□□ -0.76
SMAD5-201ENST00000506223 SETD1AO15047 1707 aaKnown RBP10.29□□□□□ -0.76
SMAD5-201ENST00000506223 CDC42BPBQ9Y5S2 1711 aa10.29□□□□□ -0.76
SMAD5-201ENST00000506223 ZMYM3Q14202 1370 aa10.28□□□□□ -0.76
SMAD5-201ENST00000506223 FAM117AQ9C073 453 aa10.28□□□□□ -0.76
SMAD5-201ENST00000506223 BCL2L12Q9HB09 334 aa10.28□□□□□ -0.76
SMAD5-201ENST00000506223 RBM27Q9P2N5 1060 aaKnown RBP10.28□□□□□ -0.76
SMAD5-201ENST00000506223 ITSN2Q9NZM3 1697 aa10.28□□□□□ -0.76
SMAD5-201ENST00000506223 NEURL4Q96JN8 1562 aa10.27□□□□□ -0.76
SMAD5-201ENST00000506223 FAM161AQ3B820 660 aa10.27□□□□□ -0.77
SMAD5-201ENST00000506223 SHANK2Q9UPX8 1470 aa10.27□□□□□ -0.77
SMAD5-201ENST00000506223 GIGYF2Q6Y7W6 1299 aaKnown RBP10.26□□□□□ -0.77
SMAD5-201ENST00000506223 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
SMAD5-201ENST00000506223 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
SMAD5-201ENST00000506223 DNMT1P26358 1616 aaKnown RBP10.25□□□□□ -0.77
SMAD5-201ENST00000506223 PTPRKQ15262 1439 aa10.25□□□□□ -0.77
SMAD5-201ENST00000506223 PRSS12P56730 875 aa10.25□□□□□ -0.77
SMAD5-201ENST00000506223 METTL3Q86U44 580 aaKnown RBP10.25□□□□□ -0.77
SMAD5-201ENST00000506223 DDRGK1Q96HY6 314 aa10.25□□□□□ -0.77
SMAD5-201ENST00000506223 ADGRG1Q9Y653 693 aa10.25□□□□□ -0.77
SMAD5-201ENST00000506223 VWDEQ8N2E2 1590 aa10.25□□□□□ -0.77
SMAD5-201ENST00000506223 STRCP1A6NGW2 1772 aa10.24□□□□□ -0.77
SMAD5-201ENST00000506223 ABCC1P33527 1531 aa10.24□□□□□ -0.77
SMAD5-201ENST00000506223 OATP04181 439 aa10.24□□□□□ -0.77
SMAD5-201ENST00000506223 COL9A1P20849 921 aa10.24□□□□□ -0.77
SMAD5-201ENST00000506223 MDM2Q00987 491 aaPredicted RBP10.24□□□□□ -0.77
SMAD5-201ENST00000506223 LHX8Q68G74 356 aa10.24□□□□□ -0.77
SMAD5-201ENST00000506223 POTEAQ6S8J7 498 aa10.24□□□□□ -0.77
SMAD5-201ENST00000506223 CDCA7LQ96GN5 454 aa10.24□□□□□ -0.77
SMAD5-201ENST00000506223 REPIN1Q9BWE0 567 aaKnown RBP10.24□□□□□ -0.77
SMAD5-201ENST00000506223 PTPREP23469 700 aa10.23□□□□□ -0.77
SMAD5-201ENST00000506223 CLCN1P35523 988 aa10.23□□□□□ -0.77
SMAD5-201ENST00000506223 ATP1B4Q9UN42 357 aaPredicted RBP10.23□□□□□ -0.77
SMAD5-201ENST00000506223 TIMELESSQ9UNS1 1208 aa10.23□□□□□ -0.77
SMAD5-201ENST00000506223 PLEKHG3A1L390 1219 aa10.22□□□□□ -0.77
SMAD5-201ENST00000506223 PPP1R3GB7ZBB8 358 aa10.22□□□□□ -0.77
SMAD5-201ENST00000506223 PXYLP1Q8TE99 480 aa10.22□□□□□ -0.77
SMAD5-201ENST00000506223 TMUB1Q9BVT8 246 aa10.22□□□□□ -0.77
SMAD5-201ENST00000506223 GPCPD1Q9NPB8 672 aa10.22□□□□□ -0.77
SMAD5-201ENST00000506223 A2ML1A8K2U0 1454 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms