RNA–Protein interactions for RNA: ENST00000506134.5

TRIM6-208, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-208ENST00000506134 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
TRIM6-208ENST00000506134 C14orf37Q86TY3 774 aa13.9□□□□□ -0.18
TRIM6-208ENST00000506134 KNDC1Q76NI1 1749 aa13.9□□□□□ -0.18
TRIM6-208ENST00000506134 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
TRIM6-208ENST00000506134 FAM135BQ49AJ0 1406 aa13.9□□□□□ -0.18
TRIM6-208ENST00000506134 CERKQ8TCT0 537 aa13.89□□□□□ -0.19
TRIM6-208ENST00000506134 ST20-MTHFSA0A0A6YYL1 179 aa13.88□□□□□ -0.19
TRIM6-208ENST00000506134 NPM3O75607 178 aaKnown RBP13.88□□□□□ -0.19
TRIM6-208ENST00000506134 ARHGEF28Q8N1W1 1705 aaKnown RBP13.88□□□□□ -0.19
TRIM6-208ENST00000506134 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
TRIM6-208ENST00000506134 MINK1Q8N4C8 1332 aaPredicted RBP13.88□□□□□ -0.19
TRIM6-208ENST00000506134 CENPJQ9HC77 1338 aaPredicted RBP13.88□□□□□ -0.19
TRIM6-208ENST00000506134 HIRIP3Q9BW71 556 aaPredicted RBP13.87□□□□□ -0.19
TRIM6-208ENST00000506134 C19orf44Q9H6X5 657 aa13.87□□□□□ -0.19
TRIM6-208ENST00000506134 USP47Q96K76 1375 aa13.87□□□□□ -0.19
TRIM6-208ENST00000506134 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.87□□□□□ -0.19
TRIM6-208ENST00000506134 NCOA3Q9Y6Q9 1424 aa13.86□□□□□ -0.19
TRIM6-208ENST00000506134 HSPA5P11021 654 aaKnown RBP13.86□□□□□ -0.19
TRIM6-208ENST00000506134 KCNA4P22459 653 aa13.86□□□□□ -0.19
TRIM6-208ENST00000506134 EIF4G2P78344 907 aaKnown RBP eCLIP13.85□□□□□ -0.19
TRIM6-208ENST00000506134 EIF3AQ14152 1382 aaKnown RBP13.85□□□□□ -0.19
TRIM6-208ENST00000506134 TESK2Q96S53 571 aa13.83□□□□□ -0.19
TRIM6-208ENST00000506134 MSH6P52701 1360 aa13.83□□□□□ -0.19
TRIM6-208ENST00000506134 ADGRL3Q9HAR2 1447 aa13.83□□□□□ -0.2
TRIM6-208ENST00000506134 ATF3P18847 181 aa13.83□□□□□ -0.2
TRIM6-208ENST00000506134 ILDR1Q86SU0 546 aaPredicted RBP13.83□□□□□ -0.2
TRIM6-208ENST00000506134 NALCNQ8IZF0 1738 aa13.82□□□□□ -0.2
TRIM6-208ENST00000506134 NUTM2FA1L443 756 aa13.82□□□□□ -0.2
TRIM6-208ENST00000506134 WASLO00401 505 aaPredicted RBP13.82□□□□□ -0.2
TRIM6-208ENST00000506134 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
TRIM6-208ENST00000506134 CADPS2Q86UW7 1296 aa13.81□□□□□ -0.2
TRIM6-208ENST00000506134 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
TRIM6-208ENST00000506134 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
TRIM6-208ENST00000506134 SLAIN2Q9P270 581 aa13.79□□□□□ -0.2
TRIM6-208ENST00000506134 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
TRIM6-208ENST00000506134 TOM1O60784 492 aa13.78□□□□□ -0.2
TRIM6-208ENST00000506134 IQSEC2Q5JU85 1478 aa13.78□□□□□ -0.2
TRIM6-208ENST00000506134 EVC2Q86UK5 1308 aa13.78□□□□□ -0.2
TRIM6-208ENST00000506134 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.2
TRIM6-208ENST00000506134 SRPK2P78362 688 aaKnown RBP13.77□□□□□ -0.21
TRIM6-208ENST00000506134 DCCP43146 1447 aa13.76□□□□□ -0.21
TRIM6-208ENST00000506134 C11orf95C9JLR9 678 aaPredicted RBP13.76□□□□□ -0.21
TRIM6-208ENST00000506134 TMF1P82094 1093 aa13.76□□□□□ -0.21
TRIM6-208ENST00000506134 NUDT16Q96DE0 195 aaKnown RBP13.76□□□□□ -0.21
TRIM6-208ENST00000506134 ADGRB2O60241 1585 aa13.76□□□□□ -0.21
TRIM6-208ENST00000506134 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
TRIM6-208ENST00000506134 TULP4Q9NRJ4 1543 aa13.75□□□□□ -0.21
TRIM6-208ENST00000506134 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
TRIM6-208ENST00000506134 SLC24A1O60721 1099 aa13.75□□□□□ -0.21
TRIM6-208ENST00000506134 PIP4K2BP78356 416 aa13.75□□□□□ -0.21
TRIM6-208ENST00000506134 ORAI2Q96SN7 254 aa13.75□□□□□ -0.21
TRIM6-208ENST00000506134 DISP3Q9P2K9 1392 aa13.75□□□□□ -0.21
TRIM6-208ENST00000506134 MST1RQ04912 1400 aa13.75□□□□□ -0.21
TRIM6-208ENST00000506134 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
TRIM6-208ENST00000506134 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
TRIM6-208ENST00000506134 FMN2Q9NZ56 1722 aa13.73□□□□□ -0.21
TRIM6-208ENST00000506134 RGPD8O14715 1765 aaPredicted RBP13.73□□□□□ -0.21
TRIM6-208ENST00000506134 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
TRIM6-208ENST00000506134 BRINP3Q76B58 766 aa13.71□□□□□ -0.21
TRIM6-208ENST00000506134 USP32Q8NFA0 1604 aa13.71□□□□□ -0.21
TRIM6-208ENST00000506134 PMFBP1Q8TBY8 1022 aa13.71□□□□□ -0.21
TRIM6-208ENST00000506134 PUS7Q96PZ0 661 aaKnown RBP13.71□□□□□ -0.21
TRIM6-208ENST00000506134 POLR3GLQ9BT43 218 aa13.71□□□□□ -0.21
TRIM6-208ENST00000506134 CABP1Q9NZU7 370 aa13.71□□□□□ -0.21
TRIM6-208ENST00000506134 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
TRIM6-208ENST00000506134 CDCA8Q53HL2 280 aa13.71□□□□□ -0.22
TRIM6-208ENST00000506134 PHF8Q9UPP1 1060 aa13.71□□□□□ -0.22
TRIM6-208ENST00000506134 TMC1Q8TDI8 760 aa13.7□□□□□ -0.22
TRIM6-208ENST00000506134 DDX17Q92841 729 aaKnown RBP13.7□□□□□ -0.22
TRIM6-208ENST00000506134 SLC12A5Q9H2X9 1139 aa13.7□□□□□ -0.22
TRIM6-208ENST00000506134 ATP7BP35670 1465 aa13.69□□□□□ -0.22
TRIM6-208ENST00000506134 PLEKHG3A1L390 1219 aa13.69□□□□□ -0.22
TRIM6-208ENST00000506134 FOXO3O43524 673 aa13.69□□□□□ -0.22
TRIM6-208ENST00000506134 KIF7Q2M1P5 1343 aa13.68□□□□□ -0.22
TRIM6-208ENST00000506134 PPIP5K1Q6PFW1 1433 aa13.67□□□□□ -0.22
TRIM6-208ENST00000506134 ATAD2Q6PL18 1390 aa13.67□□□□□ -0.22
TRIM6-208ENST00000506134 ACEP12821 1306 aa13.66□□□□□ -0.22
TRIM6-208ENST00000506134 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
TRIM6-208ENST00000506134 XPCQ01831 940 aaPredicted RBP13.66□□□□□ -0.22
TRIM6-208ENST00000506134 NGDNQ8NEJ9 315 aaKnown RBP13.66□□□□□ -0.22
TRIM6-208ENST00000506134 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
TRIM6-208ENST00000506134 ROBO1Q9Y6N7 1651 aa13.65□□□□□ -0.22
TRIM6-208ENST00000506134 PSME1Q06323 249 aa13.65□□□□□ -0.22
TRIM6-208ENST00000506134 CCDC7Q96M83 1385 aa13.65□□□□□ -0.23
TRIM6-208ENST00000506134 KRT28Q7Z3Y7 464 aa13.64□□□□□ -0.23
TRIM6-208ENST00000506134 TOPAZ1Q8N9V7 1692 aa13.63□□□□□ -0.23
TRIM6-208ENST00000506134 ZNF316A6NFI3 1004 aaPredicted RBP13.62□□□□□ -0.23
TRIM6-208ENST00000506134 POLR3AO14802 1390 aaPredicted RBP13.62□□□□□ -0.23
TRIM6-208ENST00000506134 ITSN1Q15811 1721 aa13.62□□□□□ -0.23
TRIM6-208ENST00000506134 NPHP3Q7Z494 1330 aa13.62□□□□□ -0.23
TRIM6-208ENST00000506134 HSPA1LP34931 641 aa13.61□□□□□ -0.23
TRIM6-208ENST00000506134 ZNF692Q9BU19 519 aaPredicted RBP13.61□□□□□ -0.23
TRIM6-208ENST00000506134 TERF2IPQ9NYB0 399 aa13.61□□□□□ -0.23
TRIM6-208ENST00000506134 SOS2Q07890 1332 aaPredicted RBP13.61□□□□□ -0.23
TRIM6-208ENST00000506134 HDGFL2Q7Z4V5 671 aaPredicted RBP13.6□□□□□ -0.23
TRIM6-208ENST00000506134 PANK3Q9H999 370 aa13.6□□□□□ -0.23
TRIM6-208ENST00000506134 CD163L1Q9NR16 1453 aa13.6□□□□□ -0.23
TRIM6-208ENST00000506134 KIF1AQ12756 1690 aa13.6□□□□□ -0.23
TRIM6-208ENST00000506134 CPSF1Q10570 1443 aaKnown RBP13.6□□□□□ -0.23
TRIM6-208ENST00000506134 NINLQ9Y2I6 1382 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms