RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 PRDM9Q9NQV7 894 aa12.44□□□□□ -0.42
CHD1-204ENST00000505982 CRIPAKQ8N1N5 446 aa12.43□□□□□ -0.42
CHD1-204ENST00000505982 AVPP01185 164 aa12.42□□□□□ -0.42
CHD1-204ENST00000505982 Q3C1V9 767 aa12.42□□□□□ -0.42
CHD1-204ENST00000505982 RNF19BQ6ZMZ0 732 aa12.42□□□□□ -0.42
CHD1-204ENST00000505982 AXIN1O15169 862 aa12.39□□□□□ -0.43
CHD1-204ENST00000505982 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
CHD1-204ENST00000505982 TTC24A2A3L6 582 aaPredicted RBP12.38□□□□□ -0.43
CHD1-204ENST00000505982 CD46P15529 392 aa12.37□□□□□ -0.43
CHD1-204ENST00000505982 MAP2K5Q13163 448 aa12.36□□□□□ -0.43
CHD1-204ENST00000505982 KDM4AO75164 1064 aa12.35□□□□□ -0.43
CHD1-204ENST00000505982 MMP16P51512 607 aa12.35□□□□□ -0.43
CHD1-204ENST00000505982 DACH1Q9UI36 760 aa12.35□□□□□ -0.43
CHD1-204ENST00000505982 WNT7AO00755 349 aa12.34□□□□□ -0.43
CHD1-204ENST00000505982 SMCPP49901 116 aaPredicted RBP12.34□□□□□ -0.43
CHD1-204ENST00000505982 TREML4Q6UXN2 200 aa12.34□□□□□ -0.43
CHD1-204ENST00000505982 TRIM32Q13049 653 aa12.33□□□□□ -0.44
CHD1-204ENST00000505982 USB1Q9BQ65 265 aaKnown RBP12.33□□□□□ -0.44
CHD1-204ENST00000505982 SNIP1Q8TAD8 396 aaKnown RBP12.32□□□□□ -0.44
CHD1-204ENST00000505982 ZC3H15Q8WU90 426 aaKnown RBP12.32□□□□□ -0.44
CHD1-204ENST00000505982 GMPR2Q9P2T1 348 aaKnown RBP12.32□□□□□ -0.44
CHD1-204ENST00000505982 C11orf95C9JLR9 678 aaPredicted RBP12.31□□□□□ -0.44
CHD1-204ENST00000505982 IRF6O14896 467 aa12.31□□□□□ -0.44
CHD1-204ENST00000505982 USP46P62068 366 aa12.31□□□□□ -0.44
CHD1-204ENST00000505982 DXOO77932 396 aaKnown RBP12.29□□□□□ -0.44
CHD1-204ENST00000505982 MDM2Q00987 491 aaPredicted RBP12.29□□□□□ -0.44
CHD1-204ENST00000505982 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
CHD1-204ENST00000505982 CCDC24Q8N4L8 307 aa12.27□□□□□ -0.45
CHD1-204ENST00000505982 MRGPRX2Q96LB1 330 aa12.27□□□□□ -0.45
CHD1-204ENST00000505982 REPIN1Q9BWE0 567 aaKnown RBP12.27□□□□□ -0.45
CHD1-204ENST00000505982 SMPD1P17405 629 aa12.26□□□□□ -0.45
CHD1-204ENST00000505982 TMEM132AQ24JP5 1023 aa12.26□□□□□ -0.45
CHD1-204ENST00000505982 LCE2AQ5TA79 106 aaPredicted RBP12.26□□□□□ -0.45
CHD1-204ENST00000505982 HOXA2O43364 376 aa12.24□□□□□ -0.45
CHD1-204ENST00000505982 HLA-CQ95604 372 aa12.23□□□□□ -0.45
CHD1-204ENST00000505982 GTF3C3Q9Y5Q9 886 aa12.23□□□□□ -0.45
CHD1-204ENST00000505982 J3QL48 77 aa12.22□□□□□ -0.45
CHD1-204ENST00000505982 WFS1O76024 890 aa12.22□□□□□ -0.45
CHD1-204ENST00000505982 SLC24A3Q9HC58 644 aa12.22□□□□□ -0.45
CHD1-204ENST00000505982 GPCPD1Q9NPB8 672 aa12.22□□□□□ -0.45
CHD1-204ENST00000505982 CLCN1P35523 988 aa12.21□□□□□ -0.45
CHD1-204ENST00000505982 ATP13A2Q9NQ11 1180 aa12.21□□□□□ -0.45
CHD1-204ENST00000505982 WNT7BP56706 349 aa12.2□□□□□ -0.46
CHD1-204ENST00000505982 RC3H1Q5TC82 1133 aaKnown RBP12.2□□□□□ -0.46
CHD1-204ENST00000505982 CCDC102AQ96A19 550 aa12.2□□□□□ -0.46
CHD1-204ENST00000505982 KRI1Q8N9T8 703 aaKnown RBP12.19□□□□□ -0.46
CHD1-204ENST00000505982 SENP2Q9HC62 589 aa12.19□□□□□ -0.46
CHD1-204ENST00000505982 JUNDP17535 347 aa12.18□□□□□ -0.46
CHD1-204ENST00000505982 BRPF1P55201 1214 aaPredicted RBP12.18□□□□□ -0.46
CHD1-204ENST00000505982 NEUROD2Q15784 382 aa12.18□□□□□ -0.46
CHD1-204ENST00000505982 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
CHD1-204ENST00000505982 GUCA2AQ02747 115 aa12.17□□□□□ -0.46
CHD1-204ENST00000505982 FAM217BQ9NTX9 383 aaPredicted RBP12.17□□□□□ -0.46
CHD1-204ENST00000505982 SKOR1P84550 965 aa12.16□□□□□ -0.46
CHD1-204ENST00000505982 HPS1Q92902 700 aa12.16□□□□□ -0.46
CHD1-204ENST00000505982 ZMYND10O75800 440 aa12.15□□□□□ -0.46
CHD1-204ENST00000505982 SYMPKQ92797 1274 aaKnown RBP12.15□□□□□ -0.46
CHD1-204ENST00000505982 NFX1Q12986 1120 aaKnown RBP12.14□□□□□ -0.47
CHD1-204ENST00000505982 RETREG3Q86VR2 466 aa12.14□□□□□ -0.47
CHD1-204ENST00000505982 TRIM47Q96LD4 638 aa12.14□□□□□ -0.47
CHD1-204ENST00000505982 KIFC2Q96AC6 838 aa12.13□□□□□ -0.47
CHD1-204ENST00000505982 NUDT12Q9BQG2 462 aa12.13□□□□□ -0.47
CHD1-204ENST00000505982 SNRPBP14678 240 aaKnown RBP12.12□□□□□ -0.47
CHD1-204ENST00000505982 ALDH1A1P00352 501 aa12.11□□□□□ -0.47
CHD1-204ENST00000505982 FDX1P10109 184 aa12.1□□□□□ -0.47
CHD1-204ENST00000505982 BARGINQ6ZT62 677 aa12.1□□□□□ -0.47
CHD1-204ENST00000505982 TIMELESSQ9UNS1 1208 aa12.1□□□□□ -0.47
CHD1-204ENST00000505982 EHBP1Q8NDI1 1231 aa12.09□□□□□ -0.47
CHD1-204ENST00000505982 C6orf229H3BNL8 230 aa12.08□□□□□ -0.48
CHD1-204ENST00000505982 TERTO14746 1132 aaKnown RBP12.08□□□□□ -0.48
CHD1-204ENST00000505982 WIPF1O43516 503 aa12.08□□□□□ -0.48
CHD1-204ENST00000505982 INSM1Q01101 510 aaPredicted RBP12.08□□□□□ -0.48
CHD1-204ENST00000505982 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
CHD1-204ENST00000505982 SIAH2O43255 324 aa12.05□□□□□ -0.48
CHD1-204ENST00000505982 MS4A1P11836 297 aa12.05□□□□□ -0.48
CHD1-204ENST00000505982 SSTR3P32745 418 aaPredicted RBP12.05□□□□□ -0.48
CHD1-204ENST00000505982 ERICH6Q7L0X2 663 aa12.05□□□□□ -0.48
CHD1-204ENST00000505982 STK17AQ9UEE5 414 aa12.05□□□□□ -0.48
CHD1-204ENST00000505982 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
CHD1-204ENST00000505982 WASF2Q9Y6W5 498 aa12.05□□□□□ -0.48
CHD1-204ENST00000505982 CCNYL3P0C7X3 344 aa12.04□□□□□ -0.48
CHD1-204ENST00000505982 AK7Q96M32 723 aa12.03□□□□□ -0.48
CHD1-204ENST00000505982 SPIRE2Q8WWL2 714 aa12.02□□□□□ -0.49
CHD1-204ENST00000505982 SH3BP2P78314 561 aa12.01□□□□□ -0.49
CHD1-204ENST00000505982 PTPRNQ16849 979 aa12.01□□□□□ -0.49
CHD1-204ENST00000505982 CAPN5O15484 640 aaPredicted RBP12□□□□□ -0.49
CHD1-204ENST00000505982 EVA1BQ9NVM1 165 aa12□□□□□ -0.49
CHD1-204ENST00000505982 SLC16A10Q8TF71 515 aa11.99□□□□□ -0.49
CHD1-204ENST00000505982 UNC93B1Q9H1C4 597 aa11.99□□□□□ -0.49
CHD1-204ENST00000505982 NDUFV2P19404 249 aa11.98□□□□□ -0.49
CHD1-204ENST00000505982 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
CHD1-204ENST00000505982 MOXD2PA6NHM9 499 aa11.97□□□□□ -0.49
CHD1-204ENST00000505982 SPDYE5A6NIY4 337 aa11.97□□□□□ -0.49
CHD1-204ENST00000505982 KCNH2Q12809 1159 aa11.97□□□□□ -0.49
CHD1-204ENST00000505982 PRR7Q8TB68 274 aa11.96□□□□□ -0.49
CHD1-204ENST00000505982 MTMR2Q13614 643 aa11.95□□□□□ -0.5
CHD1-204ENST00000505982 LCE2CQ5TA81 110 aa11.95□□□□□ -0.5
CHD1-204ENST00000505982 DESI1Q6ICB0 168 aa11.95□□□□□ -0.5
CHD1-204ENST00000505982 C14orf37Q86TY3 774 aa11.95□□□□□ -0.5
CHD1-204ENST00000505982 BAP1Q92560 729 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms