RNA–Protein interactions for RNA: ENST00000505964.1

SGCA-205, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-205ENST00000505964 RGS12O14924 1447 aa16.13■□□□□ 0.17
SGCA-205ENST00000505964 NRXN3Q9Y4C0 1643 aa16.13■□□□□ 0.17
SGCA-205ENST00000505964 DDX17Q92841 729 aaKnown RBP16.13■□□□□ 0.17
SGCA-205ENST00000505964 RALGAPBQ86X10 1494 aa16.13■□□□□ 0.17
SGCA-205ENST00000505964 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
SGCA-205ENST00000505964 NRXN1Q9ULB1 1477 aa16.12■□□□□ 0.17
SGCA-205ENST00000505964 NBPF8Q3BBV2 869 aa16.12■□□□□ 0.17
SGCA-205ENST00000505964 C8orf37Q96NL8 207 aa16.12■□□□□ 0.17
SGCA-205ENST00000505964 NALCNQ8IZF0 1738 aa16.11■□□□□ 0.17
SGCA-205ENST00000505964 ZNF326Q5BKZ1 582 aaKnown RBP16.11■□□□□ 0.17
SGCA-205ENST00000505964 KDM2AQ9Y2K7 1162 aa16.11■□□□□ 0.17
SGCA-205ENST00000505964 LAMC1P11047 1609 aa16.11■□□□□ 0.17
SGCA-205ENST00000505964 MST1RQ04912 1400 aa16.11■□□□□ 0.17
SGCA-205ENST00000505964 QTRT2Q9H974 415 aaKnown RBP16.09■□□□□ 0.17
SGCA-205ENST00000505964 DCCP43146 1447 aa16.09■□□□□ 0.17
SGCA-205ENST00000505964 PNPLA6Q8IY17 1366 aa16.07■□□□□ 0.16
SGCA-205ENST00000505964 VGFO15240 615 aaPredicted RBP16.06■□□□□ 0.16
SGCA-205ENST00000505964 RBM6P78332 1123 aaKnown RBP16.06■□□□□ 0.16
SGCA-205ENST00000505964 SETBP1Q9Y6X0 1596 aa16.05■□□□□ 0.16
SGCA-205ENST00000505964 PIK3C2GO75747 1445 aa16.05■□□□□ 0.16
SGCA-205ENST00000505964 GPRASP1Q5JY77 1395 aa16.05■□□□□ 0.16
SGCA-205ENST00000505964 ADAMTS2O95450 1211 aa16.05■□□□□ 0.16
SGCA-205ENST00000505964 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
SGCA-205ENST00000505964 ADGRF5Q8IZF2 1346 aa16.04■□□□□ 0.16
SGCA-205ENST00000505964 METP08581 1390 aa16.03■□□□□ 0.16
SGCA-205ENST00000505964 NGLY1Q96IV0 654 aa16.03■□□□□ 0.16
SGCA-205ENST00000505964 ADGRL3Q9HAR2 1447 aa16.02■□□□□ 0.15
SGCA-205ENST00000505964 ROCK2O75116 1388 aaKnown RBP16.01■□□□□ 0.15
SGCA-205ENST00000505964 ZNF316A6NFI3 1004 aaPredicted RBP16■□□□□ 0.15
SGCA-205ENST00000505964 EIF4G2P78344 907 aaKnown RBP eCLIP15.99■□□□□ 0.15
SGCA-205ENST00000505964 C14orf93Q9H972 538 aaKnown RBP15.99■□□□□ 0.15
SGCA-205ENST00000505964 ATAD2Q6PL18 1390 aa15.99■□□□□ 0.15
SGCA-205ENST00000505964 CARD11Q9BXL7 1154 aa15.98■□□□□ 0.15
SGCA-205ENST00000505964 C1orf167Q5SNV9 1468 aa15.97■□□□□ 0.15
SGCA-205ENST00000505964 MARF1Q9Y4F3 1742 aaKnown RBP15.97■□□□□ 0.15
SGCA-205ENST00000505964 USP21Q9UK80 565 aa15.97■□□□□ 0.15
SGCA-205ENST00000505964 ADGRB1O14514 1584 aa15.96■□□□□ 0.15
SGCA-205ENST00000505964 NBPF1Q3BBV0 1214 aa15.96■□□□□ 0.15
SGCA-205ENST00000505964 USP47Q96K76 1375 aa15.96■□□□□ 0.15
SGCA-205ENST00000505964 CFAP70Q5T0N1 1121 aa15.95■□□□□ 0.14
SGCA-205ENST00000505964 ORAI2Q96SN7 254 aa15.95■□□□□ 0.14
SGCA-205ENST00000505964 HSPA5P11021 654 aaKnown RBP15.94■□□□□ 0.14
SGCA-205ENST00000505964 ZRANB1Q9UGI0 708 aa15.93■□□□□ 0.14
SGCA-205ENST00000505964 TRPC5Q9UL62 973 aaPredicted RBP15.93■□□□□ 0.14
SGCA-205ENST00000505964 COL22A1Q8NFW1 1626 aaPredicted RBP15.93■□□□□ 0.14
SGCA-205ENST00000505964 ATRNO75882 1429 aa15.92■□□□□ 0.14
SGCA-205ENST00000505964 BRWD3Q6RI45 1802 aa15.91■□□□□ 0.14
SGCA-205ENST00000505964 SOS2Q07890 1332 aaPredicted RBP15.91■□□□□ 0.14
SGCA-205ENST00000505964 ARHGEF28Q8N1W1 1705 aaKnown RBP15.91■□□□□ 0.14
SGCA-205ENST00000505964 EIF3AQ14152 1382 aaKnown RBP15.9■□□□□ 0.14
SGCA-205ENST00000505964 ROBO2Q9HCK4 1378 aa15.9■□□□□ 0.14
SGCA-205ENST00000505964 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
SGCA-205ENST00000505964 KNDC1Q76NI1 1749 aa15.89■□□□□ 0.13
SGCA-205ENST00000505964 FNBP4Q8N3X1 1017 aaPredicted RBP15.89■□□□□ 0.13
SGCA-205ENST00000505964 BCL9LQ86UU0 1499 aa15.86■□□□□ 0.13
SGCA-205ENST00000505964 XPCQ01831 940 aaPredicted RBP15.86■□□□□ 0.13
SGCA-205ENST00000505964 YTHDC2Q9H6S0 1430 aaKnown RBP15.85■□□□□ 0.13
SGCA-205ENST00000505964 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.85■□□□□ 0.13
SGCA-205ENST00000505964 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
SGCA-205ENST00000505964 ST20-MTHFSA0A0A6YYL1 179 aa15.85■□□□□ 0.13
SGCA-205ENST00000505964 HIRIP3Q9BW71 556 aaPredicted RBP15.85■□□□□ 0.13
SGCA-205ENST00000505964 QRICH2Q9H0J4 1663 aa15.85■□□□□ 0.13
SGCA-205ENST00000505964 SLC24A1O60721 1099 aa15.84■□□□□ 0.13
SGCA-205ENST00000505964 TMEM132EQ6IEE7 984 aa15.84■□□□□ 0.13
SGCA-205ENST00000505964 LRPPRCP42704 1394 aaKnown RBP15.84■□□□□ 0.13
SGCA-205ENST00000505964 SBNO2Q9Y2G9 1366 aa15.84■□□□□ 0.13
SGCA-205ENST00000505964 ESCO1Q5FWF5 840 aa15.83■□□□□ 0.12
SGCA-205ENST00000505964 PXDNQ92626 1479 aa15.83■□□□□ 0.12
SGCA-205ENST00000505964 GLI3P10071 1580 aa15.83■□□□□ 0.12
SGCA-205ENST00000505964 ABCC11Q96J66 1382 aa15.82■□□□□ 0.12
SGCA-205ENST00000505964 TECPR2O15040 1411 aa15.82■□□□□ 0.12
SGCA-205ENST00000505964 NUTM2FA1L443 756 aa15.81■□□□□ 0.12
SGCA-205ENST00000505964 RGPD8O14715 1765 aaPredicted RBP15.81■□□□□ 0.12
SGCA-205ENST00000505964 CDC42BPGQ6DT37 1551 aa15.81■□□□□ 0.12
SGCA-205ENST00000505964 NPHP3Q7Z494 1330 aa15.81■□□□□ 0.12
SGCA-205ENST00000505964 GJD4Q96KN9 370 aaPredicted RBP15.81■□□□□ 0.12
SGCA-205ENST00000505964 TESK2Q96S53 571 aa15.81■□□□□ 0.12
SGCA-205ENST00000505964 CENPJQ9HC77 1338 aaPredicted RBP15.8■□□□□ 0.12
SGCA-205ENST00000505964 FOXO3O43524 673 aa15.8■□□□□ 0.12
SGCA-205ENST00000505964 CCDC125Q86Z20 511 aa15.8■□□□□ 0.12
SGCA-205ENST00000505964 SIRT1Q96EB6 747 aa15.8■□□□□ 0.12
SGCA-205ENST00000505964 TRAK1Q9UPV9 953 aa15.8■□□□□ 0.12
SGCA-205ENST00000505964 CCDC7Q96M83 1385 aa15.79■□□□□ 0.12
SGCA-205ENST00000505964 DEFB132Q7Z7B7 95 aa15.79■□□□□ 0.12
SGCA-205ENST00000505964 WASHC2AQ641Q2 1341 aa15.78■□□□□ 0.12
SGCA-205ENST00000505964 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.12
SGCA-205ENST00000505964 USP32Q8NFA0 1604 aa15.77■□□□□ 0.12
SGCA-205ENST00000505964 TMF1P82094 1093 aa15.77■□□□□ 0.12
SGCA-205ENST00000505964 PLCH1Q4KWH8 1693 aa15.76■□□□□ 0.11
SGCA-205ENST00000505964 KIF7Q2M1P5 1343 aa15.76■□□□□ 0.11
SGCA-205ENST00000505964 C11orf95C9JLR9 678 aaPredicted RBP15.76■□□□□ 0.11
SGCA-205ENST00000505964 PLEKHG5O94827 1062 aa15.76■□□□□ 0.11
SGCA-205ENST00000505964 SLIT2O94813 1529 aa15.75■□□□□ 0.11
SGCA-205ENST00000505964 FMN2Q9NZ56 1722 aa15.75■□□□□ 0.11
SGCA-205ENST00000505964 CDCA8Q53HL2 280 aa15.75■□□□□ 0.11
SGCA-205ENST00000505964 UNC5CLQ8IV45 518 aa15.75■□□□□ 0.11
SGCA-205ENST00000505964 STK26Q9P289 416 aa15.75■□□□□ 0.11
SGCA-205ENST00000505964 LRP5O75197 1615 aa15.75■□□□□ 0.11
SGCA-205ENST00000505964 ABCA3Q99758 1704 aa15.74■□□□□ 0.11
SGCA-205ENST00000505964 WAPLQ7Z5K2 1190 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms