RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 ROCK1Q13464 1354 aa10.28□□□□□ -0.76
NR1I3-221ENST00000505944 PNPLA6Q8IY17 1366 aa10.28□□□□□ -0.76
NR1I3-221ENST00000505944 PTCH1Q13635 1447 aa10.28□□□□□ -0.76
NR1I3-221ENST00000505944 TRPC5Q9UL62 973 aaPredicted RBP10.28□□□□□ -0.76
NR1I3-221ENST00000505944 LAMC1P11047 1609 aa10.28□□□□□ -0.76
NR1I3-221ENST00000505944 NALCNQ8IZF0 1738 aa10.27□□□□□ -0.76
NR1I3-221ENST00000505944 FNBP4Q8N3X1 1017 aaPredicted RBP10.25□□□□□ -0.77
NR1I3-221ENST00000505944 NUP155O75694 1391 aa10.25□□□□□ -0.77
NR1I3-221ENST00000505944 KIF1BO60333 1816 aa10.24□□□□□ -0.77
NR1I3-221ENST00000505944 SAMD1Q6SPF0 538 aaPredicted RBP10.24□□□□□ -0.77
NR1I3-221ENST00000505944 USP21Q9UK80 565 aa10.24□□□□□ -0.77
NR1I3-221ENST00000505944 SOS2Q07890 1332 aaPredicted RBP10.24□□□□□ -0.77
NR1I3-221ENST00000505944 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
NR1I3-221ENST00000505944 NEXMIFQ5QGS0 1516 aa10.23□□□□□ -0.77
NR1I3-221ENST00000505944 EP400Q96L91 3159 aa10.23□□□□□ -0.77
NR1I3-221ENST00000505944 CLTCL1P53675 1640 aa10.23□□□□□ -0.77
NR1I3-221ENST00000505944 ATXN8OSP0DMR3 200 aa10.23□□□□□ -0.77
NR1I3-221ENST00000505944 C1orf167Q5SNV9 1468 aa10.23□□□□□ -0.77
NR1I3-221ENST00000505944 COL22A1Q8NFW1 1626 aaPredicted RBP10.22□□□□□ -0.77
NR1I3-221ENST00000505944 PCGF6Q9BYE7 350 aa10.22□□□□□ -0.77
NR1I3-221ENST00000505944 ATRNO75882 1429 aa10.22□□□□□ -0.77
NR1I3-221ENST00000505944 ADAMTS2O95450 1211 aa10.21□□□□□ -0.77
NR1I3-221ENST00000505944 ZNF326Q5BKZ1 582 aaKnown RBP10.21□□□□□ -0.77
NR1I3-221ENST00000505944 METP08581 1390 aa10.21□□□□□ -0.78
NR1I3-221ENST00000505944 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
NR1I3-221ENST00000505944 LRPPRCP42704 1394 aaKnown RBP10.2□□□□□ -0.78
NR1I3-221ENST00000505944 TRIM26Q12899 539 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-221ENST00000505944 NPHP3Q7Z494 1330 aa10.2□□□□□ -0.78
NR1I3-221ENST00000505944 VGFO15240 615 aaPredicted RBP10.19□□□□□ -0.78
NR1I3-221ENST00000505944 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
NR1I3-221ENST00000505944 NAIPQ13075 1403 aa10.18□□□□□ -0.78
NR1I3-221ENST00000505944 DDX17Q92841 729 aaKnown RBP10.18□□□□□ -0.78
NR1I3-221ENST00000505944 SPINK5Q9NQ38 1064 aaPredicted RBP10.18□□□□□ -0.78
NR1I3-221ENST00000505944 MARF1Q9Y4F3 1742 aaKnown RBP10.18□□□□□ -0.78
NR1I3-221ENST00000505944 MYOM2P54296 1465 aa10.17□□□□□ -0.78
NR1I3-221ENST00000505944 BLMP54132 1417 aaPredicted RBP10.17□□□□□ -0.78
NR1I3-221ENST00000505944 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.17□□□□□ -0.78
NR1I3-221ENST00000505944 CAPN15O75808 1086 aa10.17□□□□□ -0.78
NR1I3-221ENST00000505944 PPLO60437 1756 aa10.16□□□□□ -0.78
NR1I3-221ENST00000505944 RPGRIP1LQ68CZ1 1315 aa10.16□□□□□ -0.78
NR1I3-221ENST00000505944 SF3B2Q13435 895 aaKnown RBP10.16□□□□□ -0.78
NR1I3-221ENST00000505944 GJD4Q96KN9 370 aaPredicted RBP10.16□□□□□ -0.78
NR1I3-221ENST00000505944 CDC42BPGQ6DT37 1551 aa10.15□□□□□ -0.78
NR1I3-221ENST00000505944 DSG3P32926 999 aa10.15□□□□□ -0.78
NR1I3-221ENST00000505944 BCL9LQ86UU0 1499 aa10.15□□□□□ -0.78
NR1I3-221ENST00000505944 LRP5O75197 1615 aa10.15□□□□□ -0.79
NR1I3-221ENST00000505944 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
NR1I3-221ENST00000505944 PXDNQ92626 1479 aa10.13□□□□□ -0.79
NR1I3-221ENST00000505944 ORAI2Q96SN7 254 aa10.13□□□□□ -0.79
NR1I3-221ENST00000505944 ROBO2Q9HCK4 1378 aa10.13□□□□□ -0.79
NR1I3-221ENST00000505944 UNC5CLQ8IV45 518 aa10.12□□□□□ -0.79
NR1I3-221ENST00000505944 CCDC144AA2RUR9 1427 aa10.11□□□□□ -0.79
NR1I3-221ENST00000505944 ESCO1Q5FWF5 840 aa10.11□□□□□ -0.79
NR1I3-221ENST00000505944 SLIT2O94813 1529 aa10.11□□□□□ -0.79
NR1I3-221ENST00000505944 KIF1AQ12756 1690 aa10.1□□□□□ -0.79
NR1I3-221ENST00000505944 KNDC1Q76NI1 1749 aa10.1□□□□□ -0.79
NR1I3-221ENST00000505944 IFT172Q9UG01 1749 aa10.1□□□□□ -0.79
NR1I3-221ENST00000505944 RALGAPBQ86X10 1494 aa10.1□□□□□ -0.79
NR1I3-221ENST00000505944 TECPR2O15040 1411 aa10.09□□□□□ -0.79
NR1I3-221ENST00000505944 FMN2Q9NZ56 1722 aa10.08□□□□□ -0.8
NR1I3-221ENST00000505944 NWD2Q9ULI1 1742 aa10.08□□□□□ -0.8
NR1I3-221ENST00000505944 FOXO3O43524 673 aa10.08□□□□□ -0.8
NR1I3-221ENST00000505944 ONECUT3O60422 494 aaPredicted RBP10.08□□□□□ -0.8
NR1I3-221ENST00000505944 VPS72Q15906 364 aa10.08□□□□□ -0.8
NR1I3-221ENST00000505944 ZNF219Q9P2Y4 722 aaPredicted RBP10.08□□□□□ -0.8
NR1I3-221ENST00000505944 USP32Q8NFA0 1604 aa10.07□□□□□ -0.8
NR1I3-221ENST00000505944 GLI3P10071 1580 aa10.07□□□□□ -0.8
NR1I3-221ENST00000505944 BAG6P46379 1132 aa10.07□□□□□ -0.8
NR1I3-221ENST00000505944 PSME1Q06323 249 aa10.07□□□□□ -0.8
NR1I3-221ENST00000505944 BRWD3Q6RI45 1802 aa10.07□□□□□ -0.8
NR1I3-221ENST00000505944 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
NR1I3-221ENST00000505944 ARHGEF10O15013 1369 aa10.06□□□□□ -0.8
NR1I3-221ENST00000505944 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
NR1I3-221ENST00000505944 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
NR1I3-221ENST00000505944 SEPT12Q8IYM1 358 aa10.06□□□□□ -0.8
NR1I3-221ENST00000505944 ABCC11Q96J66 1382 aa10.05□□□□□ -0.8
NR1I3-221ENST00000505944 ANKRD30BQ9BXX2 1392 aa10.05□□□□□ -0.8
NR1I3-221ENST00000505944 RGPD8O14715 1765 aaPredicted RBP10.05□□□□□ -0.8
NR1I3-221ENST00000505944 ABCA3Q99758 1704 aa10.04□□□□□ -0.8
NR1I3-221ENST00000505944 SBNO1A3KN83 1393 aa10.04□□□□□ -0.8
NR1I3-221ENST00000505944 PLCH1Q4KWH8 1693 aa10.04□□□□□ -0.8
NR1I3-221ENST00000505944 SIRT1Q96EB6 747 aa10.04□□□□□ -0.8
NR1I3-221ENST00000505944 TNS3Q68CZ2 1445 aa10.04□□□□□ -0.8
NR1I3-221ENST00000505944 DEFB132Q7Z7B7 95 aa10.03□□□□□ -0.8
NR1I3-221ENST00000505944 MPHOSPH9Q99550 1183 aa10.03□□□□□ -0.8
NR1I3-221ENST00000505944 DISP2A7MBM2 1401 aa10.02□□□□□ -0.81
NR1I3-221ENST00000505944 XPCQ01831 940 aaPredicted RBP10.02□□□□□ -0.81
NR1I3-221ENST00000505944 RGPD1P0DJD0 1748 aa10.02□□□□□ -0.81
NR1I3-221ENST00000505944 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
NR1I3-221ENST00000505944 HRCP23327 699 aa10.01□□□□□ -0.81
NR1I3-221ENST00000505944 KRT28Q7Z3Y7 464 aa10.01□□□□□ -0.81
NR1I3-221ENST00000505944 CCDC9Q9Y3X0 531 aaKnown RBP10.01□□□□□ -0.81
NR1I3-221ENST00000505944 ADGRF5Q8IZF2 1346 aa10.01□□□□□ -0.81
NR1I3-221ENST00000505944 ACIN1Q9UKV3 1341 aaKnown RBP10.01□□□□□ -0.81
NR1I3-221ENST00000505944 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
NR1I3-221ENST00000505944 PIK3C2GO75747 1445 aa10□□□□□ -0.81
NR1I3-221ENST00000505944 SPATA31E1Q6ZUB1 1445 aa10□□□□□ -0.81
NR1I3-221ENST00000505944 NUTM2FA1L443 756 aa10□□□□□ -0.81
NR1I3-221ENST00000505944 ADGRB2O60241 1585 aa10□□□□□ -0.81
NR1I3-221ENST00000505944 EIF3AQ14152 1382 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms