RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 PIK3C2GO75747 1445 aa17.81■□□□□ 0.44
PDLIM7-214ENST00000505746 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
PDLIM7-214ENST00000505746 AFF2P51816 1311 aa17.8■□□□□ 0.44
PDLIM7-214ENST00000505746 ESCO1Q5FWF5 840 aa17.8■□□□□ 0.44
PDLIM7-214ENST00000505746 WAPLQ7Z5K2 1190 aa17.8■□□□□ 0.44
PDLIM7-214ENST00000505746 C8orf37Q96NL8 207 aa17.79■□□□□ 0.44
PDLIM7-214ENST00000505746 C14orf93Q9H972 538 aaKnown RBP17.79■□□□□ 0.44
PDLIM7-214ENST00000505746 SIRT1Q96EB6 747 aa17.78■□□□□ 0.44
PDLIM7-214ENST00000505746 NPHP3Q7Z494 1330 aa17.77■□□□□ 0.44
PDLIM7-214ENST00000505746 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
PDLIM7-214ENST00000505746 YTHDC2Q9H6S0 1430 aaKnown RBP17.76■□□□□ 0.43
PDLIM7-214ENST00000505746 ADAMTS2O95450 1211 aa17.76■□□□□ 0.43
PDLIM7-214ENST00000505746 CFAP70Q5T0N1 1121 aa17.75■□□□□ 0.43
PDLIM7-214ENST00000505746 NGLY1Q96IV0 654 aa17.75■□□□□ 0.43
PDLIM7-214ENST00000505746 LAMC1P11047 1609 aa17.75■□□□□ 0.43
PDLIM7-214ENST00000505746 DHX57Q6P158 1386 aaKnown RBP17.75■□□□□ 0.43
PDLIM7-214ENST00000505746 NUTM2FA1L443 756 aa17.74■□□□□ 0.43
PDLIM7-214ENST00000505746 FOXO3O43524 673 aa17.74■□□□□ 0.43
PDLIM7-214ENST00000505746 HRCP23327 699 aa17.74■□□□□ 0.43
PDLIM7-214ENST00000505746 QTRT2Q9H974 415 aaKnown RBP17.74■□□□□ 0.43
PDLIM7-214ENST00000505746 IFT172Q9UG01 1749 aa17.74■□□□□ 0.43
PDLIM7-214ENST00000505746 PLEKHH1Q9ULM0 1364 aa17.74■□□□□ 0.43
PDLIM7-214ENST00000505746 MYOM2P54296 1465 aa17.73■□□□□ 0.43
PDLIM7-214ENST00000505746 NRXN1Q9ULB1 1477 aa17.73■□□□□ 0.43
PDLIM7-214ENST00000505746 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
PDLIM7-214ENST00000505746 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
PDLIM7-214ENST00000505746 XPCQ01831 940 aaPredicted RBP17.69■□□□□ 0.42
PDLIM7-214ENST00000505746 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
PDLIM7-214ENST00000505746 USP21Q9UK80 565 aa17.69■□□□□ 0.42
PDLIM7-214ENST00000505746 KNDC1Q76NI1 1749 aa17.68■□□□□ 0.42
PDLIM7-214ENST00000505746 FNBP4Q8N3X1 1017 aaPredicted RBP17.68■□□□□ 0.42
PDLIM7-214ENST00000505746 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDLIM7-214ENST00000505746 PRAM1Q96QH2 718 aa17.68■□□□□ 0.42
PDLIM7-214ENST00000505746 POGKQ9P215 609 aa17.68■□□□□ 0.42
PDLIM7-214ENST00000505746 PXDNQ92626 1479 aa17.68■□□□□ 0.42
PDLIM7-214ENST00000505746 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
PDLIM7-214ENST00000505746 TRPC5Q9UL62 973 aaPredicted RBP17.66■□□□□ 0.42
PDLIM7-214ENST00000505746 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
PDLIM7-214ENST00000505746 SAFB2Q14151 953 aaKnown RBP eCLIP17.65■□□□□ 0.42
PDLIM7-214ENST00000505746 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
PDLIM7-214ENST00000505746 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
PDLIM7-214ENST00000505746 PSME1Q06323 249 aa17.64■□□□□ 0.41
PDLIM7-214ENST00000505746 COL22A1Q8NFW1 1626 aaPredicted RBP17.63■□□□□ 0.41
PDLIM7-214ENST00000505746 SPATA31A3Q5VYP0 1347 aa17.63■□□□□ 0.41
PDLIM7-214ENST00000505746 TRAK1Q9UPV9 953 aa17.62■□□□□ 0.41
PDLIM7-214ENST00000505746 RGS12O14924 1447 aa17.62■□□□□ 0.41
PDLIM7-214ENST00000505746 DLC1Q96QB1 1528 aa17.62■□□□□ 0.41
PDLIM7-214ENST00000505746 FMN2Q9NZ56 1722 aa17.61■□□□□ 0.41
PDLIM7-214ENST00000505746 KIF1AQ12756 1690 aa17.59■□□□□ 0.41
PDLIM7-214ENST00000505746 ADGRB1O14514 1584 aa17.58■□□□□ 0.41
PDLIM7-214ENST00000505746 ATRNO75882 1429 aa17.58■□□□□ 0.41
PDLIM7-214ENST00000505746 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.41
PDLIM7-214ENST00000505746 HAP1P54257 671 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-214ENST00000505746 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-214ENST00000505746 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
PDLIM7-214ENST00000505746 SBNO1A3KN83 1393 aa17.56■□□□□ 0.4
PDLIM7-214ENST00000505746 MINK1Q8N4C8 1332 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-214ENST00000505746 PMFBP1Q8TBY8 1022 aa17.56■□□□□ 0.4
PDLIM7-214ENST00000505746 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-214ENST00000505746 TNS3Q68CZ2 1445 aa17.55■□□□□ 0.4
PDLIM7-214ENST00000505746 LMOD2Q6P5Q4 547 aa17.55■□□□□ 0.4
PDLIM7-214ENST00000505746 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-214ENST00000505746 ARHGEF10O15013 1369 aa17.54■□□□□ 0.4
PDLIM7-214ENST00000505746 WASLO00401 505 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-214ENST00000505746 UNC5CLQ8IV45 518 aa17.54■□□□□ 0.4
PDLIM7-214ENST00000505746 ATAD2Q6PL18 1390 aa17.53■□□□□ 0.4
PDLIM7-214ENST00000505746 ADGRB2O60241 1585 aa17.53■□□□□ 0.4
PDLIM7-214ENST00000505746 CABLES1Q8TDN4 633 aa17.52■□□□□ 0.4
PDLIM7-214ENST00000505746 GPRASP1Q5JY77 1395 aa17.52■□□□□ 0.39
PDLIM7-214ENST00000505746 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
PDLIM7-214ENST00000505746 SLIT2O94813 1529 aa17.5■□□□□ 0.39
PDLIM7-214ENST00000505746 PRR36Q9H6K5 1346 aa17.49■□□□□ 0.39
PDLIM7-214ENST00000505746 NGDNQ8NEJ9 315 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-214ENST00000505746 TULP4Q9NRJ4 1543 aa17.48■□□□□ 0.39
PDLIM7-214ENST00000505746 VPS72Q15906 364 aa17.47■□□□□ 0.39
PDLIM7-214ENST00000505746 USP32Q8NFA0 1604 aa17.47■□□□□ 0.39
PDLIM7-214ENST00000505746 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
PDLIM7-214ENST00000505746 NUDT16Q96DE0 195 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-214ENST00000505746 MARF1Q9Y4F3 1742 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-214ENST00000505746 RGPD8O14715 1765 aaPredicted RBP17.45■□□□□ 0.38
PDLIM7-214ENST00000505746 RALGAPBQ86X10 1494 aa17.45■□□□□ 0.38
PDLIM7-214ENST00000505746 FAM83GA6ND36 823 aa17.44■□□□□ 0.38
PDLIM7-214ENST00000505746 PAK3O75914 559 aaPredicted RBP17.44■□□□□ 0.38
PDLIM7-214ENST00000505746 CDK19Q9BWU1 502 aa17.44■□□□□ 0.38
PDLIM7-214ENST00000505746 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
PDLIM7-214ENST00000505746 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.42■□□□□ 0.38
PDLIM7-214ENST00000505746 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
PDLIM7-214ENST00000505746 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
PDLIM7-214ENST00000505746 CCDC61Q9Y6R9 512 aa17.41■□□□□ 0.38
PDLIM7-214ENST00000505746 ONECUT3O60422 494 aaPredicted RBP17.4■□□□□ 0.38
PDLIM7-214ENST00000505746 ATP7BP35670 1465 aa17.39■□□□□ 0.37
PDLIM7-214ENST00000505746 BTG4Q9NY30 223 aa17.39■□□□□ 0.37
PDLIM7-214ENST00000505746 GLI3P10071 1580 aa17.39■□□□□ 0.37
PDLIM7-214ENST00000505746 ARHGEF28Q8N1W1 1705 aaKnown RBP17.38■□□□□ 0.37
PDLIM7-214ENST00000505746 TRPM3Q9HCF6 1732 aaPredicted RBP17.38■□□□□ 0.37
PDLIM7-214ENST00000505746 PLEKHG3A1L390 1219 aa17.37■□□□□ 0.37
PDLIM7-214ENST00000505746 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
PDLIM7-214ENST00000505746 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
PDLIM7-214ENST00000505746 KIAA1210Q9ULL0 1709 aa17.37■□□□□ 0.37
PDLIM7-214ENST00000505746 ACEP12821 1306 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms