RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 PPP4R2Q9NY27 417 aa23■■□□□ 1.27
TRAPPC11-204ENST00000505676 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
TRAPPC11-204ENST00000505676 BCANQ96GW7 911 aa22.98■■□□□ 1.27
TRAPPC11-204ENST00000505676 NLRP1Q9C000 1473 aa22.98■■□□□ 1.27
TRAPPC11-204ENST00000505676 ABCC11Q96J66 1382 aa22.98■■□□□ 1.27
TRAPPC11-204ENST00000505676 SLC12A5Q9H2X9 1139 aa22.97■■□□□ 1.27
TRAPPC11-204ENST00000505676 POGKQ9P215 609 aa22.97■■□□□ 1.27
TRAPPC11-204ENST00000505676 SIRT1Q96EB6 747 aa22.95■■□□□ 1.26
TRAPPC11-204ENST00000505676 ADAMTS8Q9UP79 889 aa22.95■■□□□ 1.26
TRAPPC11-204ENST00000505676 MORC1Q86VD1 984 aa22.94■■□□□ 1.26
TRAPPC11-204ENST00000505676 PRAM1Q96QH2 718 aa22.94■■□□□ 1.26
TRAPPC11-204ENST00000505676 KNDC1Q76NI1 1749 aa22.94■■□□□ 1.26
TRAPPC11-204ENST00000505676 MED14O60244 1454 aa22.93■■□□□ 1.26
TRAPPC11-204ENST00000505676 STK26Q9P289 416 aa22.93■■□□□ 1.26
TRAPPC11-204ENST00000505676 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
TRAPPC11-204ENST00000505676 NRXN3Q9Y4C0 1643 aa22.92■■□□□ 1.26
TRAPPC11-204ENST00000505676 UBR1Q8IWV7 1749 aa22.91■■□□□ 1.26
TRAPPC11-204ENST00000505676 TECPR2O15040 1411 aa22.91■■□□□ 1.26
TRAPPC11-204ENST00000505676 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
TRAPPC11-204ENST00000505676 SRPK2P78362 688 aaKnown RBP22.9■■□□□ 1.26
TRAPPC11-204ENST00000505676 TMEM2Q9UHN6 1383 aa22.9■■□□□ 1.26
TRAPPC11-204ENST00000505676 CABP2Q9NPB3 220 aa22.88■■□□□ 1.25
TRAPPC11-204ENST00000505676 CFAP53Q96M91 514 aa22.87■■□□□ 1.25
TRAPPC11-204ENST00000505676 ATP7BP35670 1465 aa22.86■■□□□ 1.25
TRAPPC11-204ENST00000505676 RCAN3Q9UKA8 241 aa22.86■■□□□ 1.25
TRAPPC11-204ENST00000505676 CPS1P31327 1500 aa22.86■■□□□ 1.25
TRAPPC11-204ENST00000505676 A0A1W2PP64 1363 aa22.85■■□□□ 1.25
TRAPPC11-204ENST00000505676 HDGFL2Q7Z4V5 671 aaPredicted RBP22.85■■□□□ 1.25
TRAPPC11-204ENST00000505676 MINK1Q8N4C8 1332 aaPredicted RBP22.84■■□□□ 1.25
TRAPPC11-204ENST00000505676 ANKRD26Q9UPS8 1709 aa22.84■■□□□ 1.25
TRAPPC11-204ENST00000505676 ZNF521Q96K83 1311 aa22.84■■□□□ 1.25
TRAPPC11-204ENST00000505676 NCBP3Q53F19 620 aaKnown RBP22.84■■□□□ 1.25
TRAPPC11-204ENST00000505676 PLEKHG1Q9ULL1 1385 aa22.83■■□□□ 1.25
TRAPPC11-204ENST00000505676 IRX6P78412 446 aaPredicted RBP22.83■■□□□ 1.25
TRAPPC11-204ENST00000505676 SAFB2Q14151 953 aaKnown RBP eCLIP22.82■■□□□ 1.24
TRAPPC11-204ENST00000505676 CDK19Q9BWU1 502 aa22.82■■□□□ 1.24
TRAPPC11-204ENST00000505676 RRP1P56182 461 aaKnown RBP22.81■■□□□ 1.24
TRAPPC11-204ENST00000505676 CD163L1Q9NR16 1453 aa22.81■■□□□ 1.24
TRAPPC11-204ENST00000505676 SLIT1O75093 1534 aa22.8■■□□□ 1.24
TRAPPC11-204ENST00000505676 FER1L4A9Z1Z3 1794 aa22.8■■□□□ 1.24
TRAPPC11-204ENST00000505676 GOLGA2Q08379 1002 aa22.8■■□□□ 1.24
TRAPPC11-204ENST00000505676 C3P01024 1663 aa22.79■■□□□ 1.24
TRAPPC11-204ENST00000505676 SHPRHQ149N8 1683 aa22.79■■□□□ 1.24
TRAPPC11-204ENST00000505676 METP08581 1390 aa22.78■■□□□ 1.24
TRAPPC11-204ENST00000505676 PLEKHH1Q9ULM0 1364 aa22.78■■□□□ 1.24
TRAPPC11-204ENST00000505676 ARHGAP23Q9P227 1491 aa22.78■■□□□ 1.24
TRAPPC11-204ENST00000505676 SALL2Q9Y467 1007 aaPredicted RBP22.77■■□□□ 1.24
TRAPPC11-204ENST00000505676 TSHZ2Q9NRE2 1034 aa22.76■■□□□ 1.23
TRAPPC11-204ENST00000505676 EID1Q9Y6B2 187 aa22.76■■□□□ 1.23
TRAPPC11-204ENST00000505676 ADAMTS13Q76LX8 1427 aa22.75■■□□□ 1.23
TRAPPC11-204ENST00000505676 DIP2AQ14689 1571 aa22.75■■□□□ 1.23
TRAPPC11-204ENST00000505676 ADGRB2O60241 1585 aa22.74■■□□□ 1.23
TRAPPC11-204ENST00000505676 WASLO00401 505 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC11-204ENST00000505676 CDCA7LQ96GN5 454 aa22.74■■□□□ 1.23
TRAPPC11-204ENST00000505676 KIF20BQ96Q89 1820 aa22.74■■□□□ 1.23
TRAPPC11-204ENST00000505676 MTHFSP49914 203 aa22.73■■□□□ 1.23
TRAPPC11-204ENST00000505676 RUNDC1Q96C34 613 aa22.73■■□□□ 1.23
TRAPPC11-204ENST00000505676 E9PSI1 815 aa22.72■■□□□ 1.23
TRAPPC11-204ENST00000505676 SLFN5Q08AF3 891 aa22.71■■□□□ 1.23
TRAPPC11-204ENST00000505676 DUSP27Q5VZP5 1158 aa22.71■■□□□ 1.23
TRAPPC11-204ENST00000505676 TRMT2AQ8IZ69 625 aaKnown RBP22.71■■□□□ 1.23
TRAPPC11-204ENST00000505676 WAPLQ7Z5K2 1190 aa22.7■■□□□ 1.23
TRAPPC11-204ENST00000505676 EDC4Q6P2E9 1401 aaKnown RBP22.7■■□□□ 1.22
TRAPPC11-204ENST00000505676 APAF1O14727 1248 aa22.7■■□□□ 1.22
TRAPPC11-204ENST00000505676 FYB1O15117 783 aa22.7■■□□□ 1.22
TRAPPC11-204ENST00000505676 CPSF1Q10570 1443 aaKnown RBP22.7■■□□□ 1.22
TRAPPC11-204ENST00000505676 CABP1Q9NZU7 370 aa22.7■■□□□ 1.22
TRAPPC11-204ENST00000505676 TRHP20396 242 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC11-204ENST00000505676 THEMISQ8N1K5 641 aaPredicted RBP22.69■■□□□ 1.22
TRAPPC11-204ENST00000505676 IQSEC2Q5JU85 1478 aa22.69■■□□□ 1.22
TRAPPC11-204ENST00000505676 CDC42BPGQ6DT37 1551 aa22.69■■□□□ 1.22
TRAPPC11-204ENST00000505676 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
TRAPPC11-204ENST00000505676 CCDC27Q2M243 656 aa22.68■■□□□ 1.22
TRAPPC11-204ENST00000505676 TXNDC2Q86VQ3 553 aa22.67■■□□□ 1.22
TRAPPC11-204ENST00000505676 CCDC146Q8IYE0 955 aa22.67■■□□□ 1.22
TRAPPC11-204ENST00000505676 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.67■■□□□ 1.22
TRAPPC11-204ENST00000505676 NKTRP30414 1462 aaKnown RBP22.67■■□□□ 1.22
TRAPPC11-204ENST00000505676 PPIP5K1Q6PFW1 1433 aa22.66■■□□□ 1.22
TRAPPC11-204ENST00000505676 TNNT2P45379 298 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC11-204ENST00000505676 PNNQ9H307 717 aaKnown RBP22.66■■□□□ 1.22
TRAPPC11-204ENST00000505676 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC11-204ENST00000505676 TBX22Q9Y458 520 aa22.66■■□□□ 1.22
TRAPPC11-204ENST00000505676 CCDC136Q96JN2 1154 aa22.65■■□□□ 1.22
TRAPPC11-204ENST00000505676 CCDC61Q9Y6R9 512 aa22.65■■□□□ 1.22
TRAPPC11-204ENST00000505676 COL3A1P02461 1466 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC11-204ENST00000505676 PTCH1Q13635 1447 aa22.65■■□□□ 1.22
TRAPPC11-204ENST00000505676 PNPLA6Q8IY17 1366 aa22.64■■□□□ 1.22
TRAPPC11-204ENST00000505676 ZNF692Q9BU19 519 aaPredicted RBP22.64■■□□□ 1.21
TRAPPC11-204ENST00000505676 B4GALNT3Q6L9W6 998 aa22.63■■□□□ 1.21
TRAPPC11-204ENST00000505676 GGNBP2Q9H3C7 697 aa22.63■■□□□ 1.21
TRAPPC11-204ENST00000505676 LTKP29376 864 aa22.63■■□□□ 1.21
TRAPPC11-204ENST00000505676 WDR63Q8IWG1 891 aa22.63■■□□□ 1.21
TRAPPC11-204ENST00000505676 MON2Q7Z3U7 1717 aa22.63■■□□□ 1.21
TRAPPC11-204ENST00000505676 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
TRAPPC11-204ENST00000505676 NUDT16Q96DE0 195 aaKnown RBP22.62■■□□□ 1.21
TRAPPC11-204ENST00000505676 PIK3R4Q99570 1358 aa22.61■■□□□ 1.21
TRAPPC11-204ENST00000505676 ROBO2Q9HCK4 1378 aa22.61■■□□□ 1.21
TRAPPC11-204ENST00000505676 CEBPAP49715 358 aaPredicted RBP22.61■■□□□ 1.21
TRAPPC11-204ENST00000505676 WWC1Q8IX03 1113 aa22.6■■□□□ 1.21
TRAPPC11-204ENST00000505676 AKAP12Q02952 1782 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms