RNA–Protein interactions for RNA: ENST00000505612.1

ITGA3-206, Transcript of integrin subunit alpha 3, humanhuman

TSL 4

Gene ITGA3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-206ENST00000505612 SETD1AO15047 1707 aaKnown RBP18.84■□□□□ 0.61
ITGA3-206ENST00000505612 BRINP3Q76B58 766 aa18.82■□□□□ 0.6
ITGA3-206ENST00000505612 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
ITGA3-206ENST00000505612 DLC1Q96QB1 1528 aa18.8■□□□□ 0.6
ITGA3-206ENST00000505612 HSPA5P11021 654 aaKnown RBP18.8■□□□□ 0.6
ITGA3-206ENST00000505612 MST1RQ04912 1400 aa18.8■□□□□ 0.6
ITGA3-206ENST00000505612 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
ITGA3-206ENST00000505612 ADGRB1O14514 1584 aa18.79■□□□□ 0.6
ITGA3-206ENST00000505612 NBPF1Q3BBV0 1214 aa18.78■□□□□ 0.6
ITGA3-206ENST00000505612 PLEKHH1Q9ULM0 1364 aa18.78■□□□□ 0.6
ITGA3-206ENST00000505612 SAFB2Q14151 953 aaKnown RBP eCLIP18.77■□□□□ 0.6
ITGA3-206ENST00000505612 ESCO1Q5FWF5 840 aa18.77■□□□□ 0.6
ITGA3-206ENST00000505612 EIF3AQ14152 1382 aaKnown RBP18.77■□□□□ 0.6
ITGA3-206ENST00000505612 GPRASP1Q5JY77 1395 aa18.77■□□□□ 0.6
ITGA3-206ENST00000505612 C1orf167Q5SNV9 1468 aa18.77■□□□□ 0.59
ITGA3-206ENST00000505612 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
ITGA3-206ENST00000505612 TRPM1Q7Z4N2 1603 aa18.75■□□□□ 0.59
ITGA3-206ENST00000505612 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
ITGA3-206ENST00000505612 ROBO1Q9Y6N7 1651 aa18.73■□□□□ 0.59
ITGA3-206ENST00000505612 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
ITGA3-206ENST00000505612 JCADQ9P266 1359 aa18.73■□□□□ 0.59
ITGA3-206ENST00000505612 ORAI2Q96SN7 254 aa18.73■□□□□ 0.59
ITGA3-206ENST00000505612 KIAA1210Q9ULL0 1709 aa18.73■□□□□ 0.59
ITGA3-206ENST00000505612 NPHP3Q7Z494 1330 aa18.73■□□□□ 0.59
ITGA3-206ENST00000505612 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
ITGA3-206ENST00000505612 WASLO00401 505 aaPredicted RBP18.72■□□□□ 0.59
ITGA3-206ENST00000505612 MINK1Q8N4C8 1332 aaPredicted RBP18.72■□□□□ 0.59
ITGA3-206ENST00000505612 USP47Q96K76 1375 aa18.71■□□□□ 0.59
ITGA3-206ENST00000505612 CENPJQ9HC77 1338 aaPredicted RBP18.71■□□□□ 0.59
ITGA3-206ENST00000505612 SLC24A1O60721 1099 aa18.7■□□□□ 0.58
ITGA3-206ENST00000505612 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
ITGA3-206ENST00000505612 NUTM2FA1L443 756 aa18.69■□□□□ 0.58
ITGA3-206ENST00000505612 MIER1Q8N108 512 aa18.69■□□□□ 0.58
ITGA3-206ENST00000505612 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
ITGA3-206ENST00000505612 CARD11Q9BXL7 1154 aa18.69■□□□□ 0.58
ITGA3-206ENST00000505612 SPATA31A6Q5VVP1 1343 aa18.69■□□□□ 0.58
ITGA3-206ENST00000505612 ANKARQ7Z5J8 1434 aa18.68■□□□□ 0.58
ITGA3-206ENST00000505612 PSME1Q06323 249 aa18.68■□□□□ 0.58
ITGA3-206ENST00000505612 PHF8Q9UPP1 1060 aa18.68■□□□□ 0.58
ITGA3-206ENST00000505612 FOXO3O43524 673 aa18.67■□□□□ 0.58
ITGA3-206ENST00000505612 SOS2Q07890 1332 aaPredicted RBP18.67■□□□□ 0.58
ITGA3-206ENST00000505612 AHDC1Q5TGY3 1603 aaPredicted RBP18.67■□□□□ 0.58
ITGA3-206ENST00000505612 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
ITGA3-206ENST00000505612 CCDC7Q96M83 1385 aa18.66■□□□□ 0.58
ITGA3-206ENST00000505612 CDK19Q9BWU1 502 aa18.65■□□□□ 0.58
ITGA3-206ENST00000505612 WASHC2AQ641Q2 1341 aa18.65■□□□□ 0.58
ITGA3-206ENST00000505612 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
ITGA3-206ENST00000505612 CCDC61Q9Y6R9 512 aa18.64■□□□□ 0.57
ITGA3-206ENST00000505612 NUDT16Q96DE0 195 aaKnown RBP18.63■□□□□ 0.57
ITGA3-206ENST00000505612 PHF23Q9BUL5 403 aaPredicted RBP18.63■□□□□ 0.57
ITGA3-206ENST00000505612 KRT28Q7Z3Y7 464 aa18.62■□□□□ 0.57
ITGA3-206ENST00000505612 EVC2Q86UK5 1308 aa18.62■□□□□ 0.57
ITGA3-206ENST00000505612 PHLPP1O60346 1717 aa18.61■□□□□ 0.57
ITGA3-206ENST00000505612 ADGRB2O60241 1585 aa18.61■□□□□ 0.57
ITGA3-206ENST00000505612 SRPK2P78362 688 aaKnown RBP18.61■□□□□ 0.57
ITGA3-206ENST00000505612 NGDNQ8NEJ9 315 aaKnown RBP18.61■□□□□ 0.57
ITGA3-206ENST00000505612 DDX17Q92841 729 aaKnown RBP18.61■□□□□ 0.57
ITGA3-206ENST00000505612 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
ITGA3-206ENST00000505612 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
ITGA3-206ENST00000505612 PMFBP1Q8TBY8 1022 aa18.58■□□□□ 0.56
ITGA3-206ENST00000505612 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.56
ITGA3-206ENST00000505612 PLEKHG3A1L390 1219 aa18.57■□□□□ 0.56
ITGA3-206ENST00000505612 C11orf95C9JLR9 678 aaPredicted RBP18.57■□□□□ 0.56
ITGA3-206ENST00000505612 TULP4Q9NRJ4 1543 aa18.57■□□□□ 0.56
ITGA3-206ENST00000505612 FMN2Q9NZ56 1722 aa18.57■□□□□ 0.56
ITGA3-206ENST00000505612 PRR36Q9H6K5 1346 aa18.56■□□□□ 0.56
ITGA3-206ENST00000505612 SBNO2Q9Y2G9 1366 aa18.55■□□□□ 0.56
ITGA3-206ENST00000505612 SPATA31A3Q5VYP0 1347 aa18.55■□□□□ 0.56
ITGA3-206ENST00000505612 ST20-MTHFSA0A0A6YYL1 179 aa18.55■□□□□ 0.56
ITGA3-206ENST00000505612 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
ITGA3-206ENST00000505612 NHSL1Q5SYE7 1610 aa18.55■□□□□ 0.56
ITGA3-206ENST00000505612 SBNO1A3KN83 1393 aa18.55■□□□□ 0.56
ITGA3-206ENST00000505612 PNPLA6Q8IY17 1366 aa18.55■□□□□ 0.56
ITGA3-206ENST00000505612 ARHGEF28Q8N1W1 1705 aaKnown RBP18.54■□□□□ 0.56
ITGA3-206ENST00000505612 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
ITGA3-206ENST00000505612 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
ITGA3-206ENST00000505612 XPCQ01831 940 aaPredicted RBP18.54■□□□□ 0.56
ITGA3-206ENST00000505612 NUTM2AQ8IVF1 878 aaPredicted RBP18.54■□□□□ 0.56
ITGA3-206ENST00000505612 CCER2I3L3R5 266 aa18.53■□□□□ 0.56
ITGA3-206ENST00000505612 ANP32CO43423 234 aa18.53■□□□□ 0.56
ITGA3-206ENST00000505612 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
ITGA3-206ENST00000505612 KIF1AQ12756 1690 aa18.53■□□□□ 0.56
ITGA3-206ENST00000505612 ARHGEF10O15013 1369 aa18.52■□□□□ 0.55
ITGA3-206ENST00000505612 PXDNQ92626 1479 aa18.52■□□□□ 0.55
ITGA3-206ENST00000505612 MED1Q15648 1581 aaPredicted RBP18.51■□□□□ 0.55
ITGA3-206ENST00000505612 ZNF772Q68DY9 489 aaPredicted RBP18.51■□□□□ 0.55
ITGA3-206ENST00000505612 ZNF692Q9BU19 519 aaPredicted RBP18.51■□□□□ 0.55
ITGA3-206ENST00000505612 LMOD2Q6P5Q4 547 aa18.5■□□□□ 0.55
ITGA3-206ENST00000505612 BRD4O60885 1362 aaPredicted RBP18.5■□□□□ 0.55
ITGA3-206ENST00000505612 ATAD2Q6PL18 1390 aa18.5■□□□□ 0.55
ITGA3-206ENST00000505612 ACEP12821 1306 aa18.49■□□□□ 0.55
ITGA3-206ENST00000505612 CDCA8Q53HL2 280 aa18.49■□□□□ 0.55
ITGA3-206ENST00000505612 CABP1Q9NZU7 370 aa18.49■□□□□ 0.55
ITGA3-206ENST00000505612 ATP7BP35670 1465 aa18.49■□□□□ 0.55
ITGA3-206ENST00000505612 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
ITGA3-206ENST00000505612 PAK3O75914 559 aaPredicted RBP18.48■□□□□ 0.55
ITGA3-206ENST00000505612 HAP1P54257 671 aaPredicted RBP18.48■□□□□ 0.55
ITGA3-206ENST00000505612 TESK2Q96S53 571 aa18.48■□□□□ 0.55
ITGA3-206ENST00000505612 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
ITGA3-206ENST00000505612 NGLY1Q96IV0 654 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms