RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 FOXO3O43524 673 aa14.9□□□□□ -0.02
NEDD9-210ENST00000505589 LAMC1P11047 1609 aa14.9□□□□□ -0.02
NEDD9-210ENST00000505589 PRAG1Q86YV5 1406 aa14.9□□□□□ -0.02
NEDD9-210ENST00000505589 KIF1BO60333 1816 aa14.89□□□□□ -0.03
NEDD9-210ENST00000505589 UNC5CLQ8IV45 518 aa14.89□□□□□ -0.03
NEDD9-210ENST00000505589 SLC4A1APQ9BWU0 796 aaKnown RBP14.89□□□□□ -0.03
NEDD9-210ENST00000505589 PSME1Q06323 249 aa14.88□□□□□ -0.03
NEDD9-210ENST00000505589 SRCAPQ6ZRS2 3230 aa14.87□□□□□ -0.03
NEDD9-210ENST00000505589 NALCNQ8IZF0 1738 aa14.87□□□□□ -0.03
NEDD9-210ENST00000505589 HAP1P54257 671 aaPredicted RBP14.86□□□□□ -0.03
NEDD9-210ENST00000505589 BCL9LQ86UU0 1499 aa14.84□□□□□ -0.03
NEDD9-210ENST00000505589 SIRT1Q96EB6 747 aa14.84□□□□□ -0.03
NEDD9-210ENST00000505589 ACIN1Q9UKV3 1341 aaKnown RBP14.84□□□□□ -0.03
NEDD9-210ENST00000505589 COL22A1Q8NFW1 1626 aaPredicted RBP14.84□□□□□ -0.03
NEDD9-210ENST00000505589 MYOM2P54296 1465 aa14.83□□□□□ -0.03
NEDD9-210ENST00000505589 CLTCL1P53675 1640 aa14.83□□□□□ -0.04
NEDD9-210ENST00000505589 BLMP54132 1417 aaPredicted RBP14.83□□□□□ -0.04
NEDD9-210ENST00000505589 KRT28Q7Z3Y7 464 aa14.82□□□□□ -0.04
NEDD9-210ENST00000505589 SPATA31A3Q5VYP0 1347 aa14.82□□□□□ -0.04
NEDD9-210ENST00000505589 ABCC11Q96J66 1382 aa14.82□□□□□ -0.04
NEDD9-210ENST00000505589 STK26Q9P289 416 aa14.81□□□□□ -0.04
NEDD9-210ENST00000505589 ANKRD30BQ9BXX2 1392 aa14.81□□□□□ -0.04
NEDD9-210ENST00000505589 NAIPQ13075 1403 aa14.81□□□□□ -0.04
NEDD9-210ENST00000505589 ONECUT3O60422 494 aaPredicted RBP14.8□□□□□ -0.04
NEDD9-210ENST00000505589 XPCQ01831 940 aaPredicted RBP14.8□□□□□ -0.04
NEDD9-210ENST00000505589 VPS72Q15906 364 aa14.8□□□□□ -0.04
NEDD9-210ENST00000505589 WAPLQ7Z5K2 1190 aa14.8□□□□□ -0.04
NEDD9-210ENST00000505589 NUTM2FA1L443 756 aa14.79□□□□□ -0.04
NEDD9-210ENST00000505589 CCDC144AA2RUR9 1427 aa14.79□□□□□ -0.04
NEDD9-210ENST00000505589 CDC42BPGQ6DT37 1551 aa14.79□□□□□ -0.04
NEDD9-210ENST00000505589 SEPT12Q8IYM1 358 aa14.79□□□□□ -0.04
NEDD9-210ENST00000505589 PXDNQ92626 1479 aa14.79□□□□□ -0.04
NEDD9-210ENST00000505589 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
NEDD9-210ENST00000505589 RGL3Q3MIN7 710 aa14.78□□□□□ -0.04
NEDD9-210ENST00000505589 PPARGC1BQ86YN6 1023 aaKnown RBP14.78□□□□□ -0.04
NEDD9-210ENST00000505589 TECPR2O15040 1411 aa14.77□□□□□ -0.04
NEDD9-210ENST00000505589 BAG6P46379 1132 aa14.77□□□□□ -0.05
NEDD9-210ENST00000505589 KRT27Q7Z3Y8 459 aa14.77□□□□□ -0.05
NEDD9-210ENST00000505589 PHF8Q9UPP1 1060 aa14.77□□□□□ -0.05
NEDD9-210ENST00000505589 SLIT2O94813 1529 aa14.76□□□□□ -0.05
NEDD9-210ENST00000505589 EP400Q96L91 3159 aa14.76□□□□□ -0.05
NEDD9-210ENST00000505589 RALGAPBQ86X10 1494 aa14.76□□□□□ -0.05
NEDD9-210ENST00000505589 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
NEDD9-210ENST00000505589 ADGRF5Q8IZF2 1346 aa14.75□□□□□ -0.05
NEDD9-210ENST00000505589 MARF1Q9Y4F3 1742 aaKnown RBP14.75□□□□□ -0.05
NEDD9-210ENST00000505589 ARHGEF10O15013 1369 aa14.74□□□□□ -0.05
NEDD9-210ENST00000505589 DHX57Q6P158 1386 aaKnown RBP14.74□□□□□ -0.05
NEDD9-210ENST00000505589 TMEM132EQ6IEE7 984 aa14.74□□□□□ -0.05
NEDD9-210ENST00000505589 LMOD2Q6P5Q4 547 aa14.74□□□□□ -0.05
NEDD9-210ENST00000505589 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.73□□□□□ -0.05
NEDD9-210ENST00000505589 DEFB132Q7Z7B7 95 aa14.73□□□□□ -0.05
NEDD9-210ENST00000505589 SBNO1A3KN83 1393 aa14.73□□□□□ -0.05
NEDD9-210ENST00000505589 A0A0G2JS52 829 aa14.72□□□□□ -0.05
NEDD9-210ENST00000505589 MYT1Q01538 1121 aa14.72□□□□□ -0.05
NEDD9-210ENST00000505589 C14orf93Q9H972 538 aaKnown RBP14.72□□□□□ -0.05
NEDD9-210ENST00000505589 PPLO60437 1756 aa14.72□□□□□ -0.05
NEDD9-210ENST00000505589 KIF1AQ12756 1690 aa14.71□□□□□ -0.06
NEDD9-210ENST00000505589 TNS3Q68CZ2 1445 aa14.7□□□□□ -0.06
NEDD9-210ENST00000505589 YTHDC2Q9H6S0 1430 aaKnown RBP14.7□□□□□ -0.06
NEDD9-210ENST00000505589 MPHOSPH9Q99550 1183 aa14.7□□□□□ -0.06
NEDD9-210ENST00000505589 POGKQ9P215 609 aa14.7□□□□□ -0.06
NEDD9-210ENST00000505589 FAM83GA6ND36 823 aa14.68□□□□□ -0.06
NEDD9-210ENST00000505589 CABLES1Q8TDN4 633 aa14.68□□□□□ -0.06
NEDD9-210ENST00000505589 BTG4Q9NY30 223 aa14.67□□□□□ -0.06
NEDD9-210ENST00000505589 GPRASP1Q5JY77 1395 aa14.67□□□□□ -0.06
NEDD9-210ENST00000505589 GLI3P10071 1580 aa14.67□□□□□ -0.06
NEDD9-210ENST00000505589 SPATA31E1Q6ZUB1 1445 aa14.66□□□□□ -0.06
NEDD9-210ENST00000505589 EIF3AQ14152 1382 aaKnown RBP14.66□□□□□ -0.06
NEDD9-210ENST00000505589 PLEKHH1Q9ULM0 1364 aa14.66□□□□□ -0.06
NEDD9-210ENST00000505589 STAC3Q96MF2 364 aa14.66□□□□□ -0.06
NEDD9-210ENST00000505589 USP32Q8NFA0 1604 aa14.66□□□□□ -0.06
NEDD9-210ENST00000505589 PIK3C2GO75747 1445 aa14.66□□□□□ -0.06
NEDD9-210ENST00000505589 HRCP23327 699 aa14.65□□□□□ -0.06
NEDD9-210ENST00000505589 FAM98CQ17RN3 349 aaKnown RBP14.65□□□□□ -0.06
NEDD9-210ENST00000505589 PMFBP1Q8TBY8 1022 aa14.65□□□□□ -0.06
NEDD9-210ENST00000505589 PRAM1Q96QH2 718 aa14.65□□□□□ -0.06
NEDD9-210ENST00000505589 NRXN1Q9ULB1 1477 aa14.64□□□□□ -0.07
NEDD9-210ENST00000505589 NWD2Q9ULI1 1742 aa14.64□□□□□ -0.07
NEDD9-210ENST00000505589 PLEKHG5O94827 1062 aa14.64□□□□□ -0.07
NEDD9-210ENST00000505589 KNDC1Q76NI1 1749 aa14.63□□□□□ -0.07
NEDD9-210ENST00000505589 FMN2Q9NZ56 1722 aa14.63□□□□□ -0.07
NEDD9-210ENST00000505589 CFAP70Q5T0N1 1121 aa14.63□□□□□ -0.07
NEDD9-210ENST00000505589 ANKARQ7Z5J8 1434 aa14.63□□□□□ -0.07
NEDD9-210ENST00000505589 EN1Q05925 392 aaPredicted RBP14.62□□□□□ -0.07
NEDD9-210ENST00000505589 FAM196AQ6ZSG2 479 aa14.62□□□□□ -0.07
NEDD9-210ENST00000505589 NGDNQ8NEJ9 315 aaKnown RBP14.62□□□□□ -0.07
NEDD9-210ENST00000505589 PSDA5PKW4 1024 aaPredicted RBP14.61□□□□□ -0.07
NEDD9-210ENST00000505589 DCAF8L1A6NGE4 600 aa14.61□□□□□ -0.07
NEDD9-210ENST00000505589 SAFB2Q14151 953 aaKnown RBP eCLIP14.61□□□□□ -0.07
NEDD9-210ENST00000505589 BRWD3Q6RI45 1802 aa14.6□□□□□ -0.07
NEDD9-210ENST00000505589 C11orf95C9JLR9 678 aaPredicted RBP14.6□□□□□ -0.07
NEDD9-210ENST00000505589 SPATA31A5Q5VU36 1347 aa14.6□□□□□ -0.07
NEDD9-210ENST00000505589 SPATA31A7Q8IWB4 1347 aa14.6□□□□□ -0.07
NEDD9-210ENST00000505589 LRP5O75197 1615 aa14.59□□□□□ -0.07
NEDD9-210ENST00000505589 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
NEDD9-210ENST00000505589 NBPF8Q3BBV2 869 aa14.59□□□□□ -0.07
NEDD9-210ENST00000505589 NBPF14Q5TI25 921 aa14.59□□□□□ -0.07
NEDD9-210ENST00000505589 PRDM11Q9NQV5 511 aa14.59□□□□□ -0.07
NEDD9-210ENST00000505589 WASLO00401 505 aaPredicted RBP14.57□□□□□ -0.08
NEDD9-210ENST00000505589 EVA1CP58658 441 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms