RNA–Protein interactions for RNA: ENST00000505571.5

PAPD4-209, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 3

Gene PAPD4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-209ENST00000505571 RIC3Q7Z5B4 369 aa9.58□□□□□ -0.88
PAPD4-209ENST00000505571 FAM160A2Q8N612 972 aaPredicted RBP9.58□□□□□ -0.88
PAPD4-209ENST00000505571 ATP1B4Q9UN42 357 aaPredicted RBP9.58□□□□□ -0.88
PAPD4-209ENST00000505571 PPEF1O14829 653 aaPredicted RBP9.57□□□□□ -0.88
PAPD4-209ENST00000505571 GJA5P36382 358 aa9.57□□□□□ -0.88
PAPD4-209ENST00000505571 MSS51Q4VC12 460 aa9.57□□□□□ -0.88
PAPD4-209ENST00000505571 RSBN1LQ6PCB5 846 aaPredicted RBP9.57□□□□□ -0.88
PAPD4-209ENST00000505571 ANKLE1Q8NAG6 615 aa9.57□□□□□ -0.88
PAPD4-209ENST00000505571 SYMPKQ92797 1274 aaKnown RBP9.57□□□□□ -0.88
PAPD4-209ENST00000505571 FAM117AQ9C073 453 aa9.57□□□□□ -0.88
PAPD4-209ENST00000505571 PCDHGC3Q9UN70 934 aa9.57□□□□□ -0.88
PAPD4-209ENST00000505571 SPTLC1O15269 473 aa9.56□□□□□ -0.88
PAPD4-209ENST00000505571 MYSM1Q5VVJ2 828 aa9.56□□□□□ -0.88
PAPD4-209ENST00000505571 RETREG3Q86VR2 466 aa9.56□□□□□ -0.88
PAPD4-209ENST00000505571 CSPP1Q1MSJ5 1256 aa9.55□□□□□ -0.88
PAPD4-209ENST00000505571 PRKD2Q9BZL6 878 aa9.55□□□□□ -0.88
PAPD4-209ENST00000505571 SPDYE5A6NIY4 337 aa9.54□□□□□ -0.88
PAPD4-209ENST00000505571 BRPF1P55201 1214 aaPredicted RBP9.54□□□□□ -0.88
PAPD4-209ENST00000505571 MTMR2Q13614 643 aa9.54□□□□□ -0.88
PAPD4-209ENST00000505571 PRDM9Q9NQV7 894 aa9.54□□□□□ -0.88
PAPD4-209ENST00000505571 POLR3EQ9NVU0 708 aa9.54□□□□□ -0.88
PAPD4-209ENST00000505571 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
PAPD4-209ENST00000505571 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
PAPD4-209ENST00000505571 CLK2P49760 499 aaKnown RBP9.52□□□□□ -0.89
PAPD4-209ENST00000505571 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.89
PAPD4-209ENST00000505571 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
PAPD4-209ENST00000505571 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
PAPD4-209ENST00000505571 FCF1Q9Y324 198 aaKnown RBP9.52□□□□□ -0.89
PAPD4-209ENST00000505571 PCDHB15Q9Y5E8 787 aa9.52□□□□□ -0.89
PAPD4-209ENST00000505571 SLC19A1P41440 591 aa9.51□□□□□ -0.89
PAPD4-209ENST00000505571 LIMD1Q9UGP4 676 aa9.51□□□□□ -0.89
PAPD4-209ENST00000505571 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
PAPD4-209ENST00000505571 JUNDP17535 347 aa9.5□□□□□ -0.89
PAPD4-209ENST00000505571 MMP16P51512 607 aa9.5□□□□□ -0.89
PAPD4-209ENST00000505571 SKIV2LQ15477 1246 aaKnown RBP9.5□□□□□ -0.89
PAPD4-209ENST00000505571 SH3D19Q5HYK7 790 aa9.5□□□□□ -0.89
PAPD4-209ENST00000505571 PRPF38BQ5VTL8 546 aaKnown RBP9.5□□□□□ -0.89
PAPD4-209ENST00000505571 CCDC24Q8N4L8 307 aa9.5□□□□□ -0.89
PAPD4-209ENST00000505571 IL27Q8NEV9 243 aa9.5□□□□□ -0.89
PAPD4-209ENST00000505571 PRR7Q8TB68 274 aa9.5□□□□□ -0.89
PAPD4-209ENST00000505571 PLEKHG3A1L390 1219 aa9.49□□□□□ -0.89
PAPD4-209ENST00000505571 DXOO77932 396 aaKnown RBP9.49□□□□□ -0.89
PAPD4-209ENST00000505571 HRCP23327 699 aa9.49□□□□□ -0.89
PAPD4-209ENST00000505571 ZBTB24O43167 697 aaPredicted RBP9.48□□□□□ -0.89
PAPD4-209ENST00000505571 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
PAPD4-209ENST00000505571 CABLES1Q8TDN4 633 aa9.48□□□□□ -0.89
PAPD4-209ENST00000505571 TSC1Q92574 1164 aa9.46□□□□□ -0.9
PAPD4-209ENST00000505571 QPCTQ16769 361 aa9.45□□□□□ -0.9
PAPD4-209ENST00000505571 PLA2G2CQ5R387 149 aa9.45□□□□□ -0.9
PAPD4-209ENST00000505571 LIAT1Q6ZQX7 453 aa9.45□□□□□ -0.9
PAPD4-209ENST00000505571 NUDT12Q9BQG2 462 aa9.45□□□□□ -0.9
PAPD4-209ENST00000505571 LILRB3O75022 631 aa9.44□□□□□ -0.9
PAPD4-209ENST00000505571 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
PAPD4-209ENST00000505571 RPIAP49247 311 aa9.44□□□□□ -0.9
PAPD4-209ENST00000505571 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
PAPD4-209ENST00000505571 PCMTD1Q96MG8 357 aaPredicted RBP9.44□□□□□ -0.9
PAPD4-209ENST00000505571 CFAP99D6REC4 459 aa9.43□□□□□ -0.9
PAPD4-209ENST00000505571 SPRYD7Q5W111 196 aa9.43□□□□□ -0.9
PAPD4-209ENST00000505571 PROCA1Q8NCQ7 364 aaPredicted RBP9.43□□□□□ -0.9
PAPD4-209ENST00000505571 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
PAPD4-209ENST00000505571 CCNYL3P0C7X3 344 aa9.42□□□□□ -0.9
PAPD4-209ENST00000505571 PTPRNQ16849 979 aa9.42□□□□□ -0.9
PAPD4-209ENST00000505571 ZNF598Q86UK7 904 aaKnown RBP9.42□□□□□ -0.9
PAPD4-209ENST00000505571 HELBQ8NG08 1087 aaPredicted RBP9.42□□□□□ -0.9
PAPD4-209ENST00000505571 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
PAPD4-209ENST00000505571 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
PAPD4-209ENST00000505571 EMID1Q96A84 441 aaPredicted RBP9.41□□□□□ -0.9
PAPD4-209ENST00000505571 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
PAPD4-209ENST00000505571 CTHP32929 405 aa9.39□□□□□ -0.91
PAPD4-209ENST00000505571 LYPD8Q6UX82 237 aa9.39□□□□□ -0.91
PAPD4-209ENST00000505571 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.38□□□□□ -0.91
PAPD4-209ENST00000505571 EVA1BQ9NVM1 165 aa9.38□□□□□ -0.91
PAPD4-209ENST00000505571 GFRA3O60609 400 aa9.37□□□□□ -0.91
PAPD4-209ENST00000505571 KCNH2Q12809 1159 aa9.37□□□□□ -0.91
PAPD4-209ENST00000505571 TRIM32Q13049 653 aa9.37□□□□□ -0.91
PAPD4-209ENST00000505571 PDZRN3Q9UPQ7 1066 aa9.37□□□□□ -0.91
PAPD4-209ENST00000505571 LAPTM4AQ15012 233 aa9.36□□□□□ -0.91
PAPD4-209ENST00000505571 FOXC1Q12948 553 aa9.35□□□□□ -0.91
PAPD4-209ENST00000505571 PPP2R2DQ66LE6 453 aa9.35□□□□□ -0.91
PAPD4-209ENST00000505571 PTCRAQ6ISU1 281 aaPredicted RBP9.35□□□□□ -0.91
PAPD4-209ENST00000505571 AP1G2O75843 785 aa9.34□□□□□ -0.91
PAPD4-209ENST00000505571 UNC93B1Q9H1C4 597 aa9.34□□□□□ -0.91
PAPD4-209ENST00000505571 PER1O15534 1290 aaPredicted RBP9.33□□□□□ -0.92
PAPD4-209ENST00000505571 TNFRSF10AO00220 468 aa9.32□□□□□ -0.92
PAPD4-209ENST00000505571 CTDSPL2Q05D32 466 aa9.32□□□□□ -0.92
PAPD4-209ENST00000505571 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
PAPD4-209ENST00000505571 RFC5P40937 340 aa9.31□□□□□ -0.92
PAPD4-209ENST00000505571 WNT7BP56706 349 aa9.31□□□□□ -0.92
PAPD4-209ENST00000505571 MAP10Q9P2G4 905 aa9.31□□□□□ -0.92
PAPD4-209ENST00000505571 GDF9O60383 454 aa9.29□□□□□ -0.92
PAPD4-209ENST00000505571 F12P00748 615 aaPredicted RBP9.29□□□□□ -0.92
PAPD4-209ENST00000505571 PRR20EP86478 221 aa9.29□□□□□ -0.92
PAPD4-209ENST00000505571 PRR20CP86479 221 aa9.29□□□□□ -0.92
PAPD4-209ENST00000505571 PRR20DP86480 221 aa9.29□□□□□ -0.92
PAPD4-209ENST00000505571 PRR20BP86481 221 aa9.29□□□□□ -0.92
PAPD4-209ENST00000505571 PRR20AP86496 221 aa9.29□□□□□ -0.92
PAPD4-209ENST00000505571 LINC01559Q495D7 138 aa9.29□□□□□ -0.92
PAPD4-209ENST00000505571 TMEM259Q4ZIN3 620 aa9.29□□□□□ -0.92
PAPD4-209ENST00000505571 FBXO31Q5XUX0 539 aaPredicted RBP9.29□□□□□ -0.92
PAPD4-209ENST00000505571 BAP1Q92560 729 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms