RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 MAP7D2Q96T17 732 aa16.84■□□□□ 0.29
LETM1-203ENST00000505551 PRAG1Q86YV5 1406 aa16.84■□□□□ 0.29
LETM1-203ENST00000505551 UNC13BO14795 1591 aa16.84■□□□□ 0.29
LETM1-203ENST00000505551 FBXO3Q9UK99 471 aa16.83■□□□□ 0.28
LETM1-203ENST00000505551 ZFYVE16Q7Z3T8 1539 aa16.83■□□□□ 0.28
LETM1-203ENST00000505551 PER1O15534 1290 aaPredicted RBP16.83■□□□□ 0.28
LETM1-203ENST00000505551 RIPK4P57078 832 aa16.83■□□□□ 0.28
LETM1-203ENST00000505551 ZMYM3Q14202 1370 aa16.82■□□□□ 0.28
LETM1-203ENST00000505551 ZNF521Q96K83 1311 aa16.82■□□□□ 0.28
LETM1-203ENST00000505551 CHMP5Q9NZZ3 219 aa16.82■□□□□ 0.28
LETM1-203ENST00000505551 PLEKHH1Q9ULM0 1364 aa16.81■□□□□ 0.28
LETM1-203ENST00000505551 OFD1O75665 1012 aa16.81■□□□□ 0.28
LETM1-203ENST00000505551 RTEL1-TNFRSF6BF6WH68 1400 aa16.81■□□□□ 0.28
LETM1-203ENST00000505551 IGHDP01880 384 aa16.81■□□□□ 0.28
LETM1-203ENST00000505551 ATP7AQ04656 1500 aa16.81■□□□□ 0.28
LETM1-203ENST00000505551 KANK1Q14678 1352 aa16.8■□□□□ 0.28
LETM1-203ENST00000505551 IQGAP3Q86VI3 1631 aa16.8■□□□□ 0.28
LETM1-203ENST00000505551 HSP90B1P14625 803 aaKnown RBP16.8■□□□□ 0.28
LETM1-203ENST00000505551 SMAP1Q8IYB5 467 aaPredicted RBP16.8■□□□□ 0.28
LETM1-203ENST00000505551 DDX11L8A8MPP1 907 aa16.8■□□□□ 0.28
LETM1-203ENST00000505551 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
LETM1-203ENST00000505551 ABCA9Q8IUA7 1624 aa16.79■□□□□ 0.28
LETM1-203ENST00000505551 UPF2Q9HAU5 1272 aaKnown RBP16.79■□□□□ 0.28
LETM1-203ENST00000505551 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
LETM1-203ENST00000505551 CANXP27824 592 aaKnown RBP16.77■□□□□ 0.28
LETM1-203ENST00000505551 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.77■□□□□ 0.28
LETM1-203ENST00000505551 CC2D1BQ5T0F9 858 aaKnown RBP16.76■□□□□ 0.27
LETM1-203ENST00000505551 CNPY4Q8N129 248 aa16.76■□□□□ 0.27
LETM1-203ENST00000505551 TEX2Q8IWB9 1127 aa16.76■□□□□ 0.27
LETM1-203ENST00000505551 ATP10AO60312 1499 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 MAGI2Q86UL8 1455 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 ZSCAN30Q86W11 494 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 GAS2L3Q86XJ1 694 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 TESK2Q96S53 571 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 PPP1R9BQ96SB3 815 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 DISP3Q9P2K9 1392 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 UGGT1Q9NYU2 1555 aa16.75■□□□□ 0.27
LETM1-203ENST00000505551 ARAP3Q8WWN8 1544 aa16.74■□□□□ 0.27
LETM1-203ENST00000505551 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
LETM1-203ENST00000505551 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
LETM1-203ENST00000505551 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
LETM1-203ENST00000505551 CFAP44Q96MT7 982 aa16.74■□□□□ 0.27
LETM1-203ENST00000505551 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
LETM1-203ENST00000505551 CCDC173Q0VFZ6 552 aa16.73■□□□□ 0.27
LETM1-203ENST00000505551 ARID3AQ99856 593 aa16.73■□□□□ 0.27
LETM1-203ENST00000505551 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
LETM1-203ENST00000505551 ADAMTS8Q9UP79 889 aa16.73■□□□□ 0.27
LETM1-203ENST00000505551 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
LETM1-203ENST00000505551 PANK3Q9H999 370 aa16.73■□□□□ 0.27
LETM1-203ENST00000505551 ZHX1Q9UKY1 873 aaPredicted RBP16.73■□□□□ 0.27
LETM1-203ENST00000505551 CGNL1Q0VF96 1302 aa16.73■□□□□ 0.27
LETM1-203ENST00000505551 FAM69CQ0P6D2 419 aa16.72■□□□□ 0.27
LETM1-203ENST00000505551 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
LETM1-203ENST00000505551 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
LETM1-203ENST00000505551 PLCD3Q8N3E9 789 aa16.71■□□□□ 0.27
LETM1-203ENST00000505551 ADGRF5Q8IZF2 1346 aa16.71■□□□□ 0.27
LETM1-203ENST00000505551 NCOA3Q9Y6Q9 1424 aa16.71■□□□□ 0.27
LETM1-203ENST00000505551 NKTRP30414 1462 aaKnown RBP16.71■□□□□ 0.27
LETM1-203ENST00000505551 COL17A1Q9UMD9 1497 aaPredicted RBP16.71■□□□□ 0.27
LETM1-203ENST00000505551 ZNF518AQ6AHZ1 1483 aa16.7■□□□□ 0.26
LETM1-203ENST00000505551 MTERF4Q7Z6M4 381 aaKnown RBP16.7■□□□□ 0.26
LETM1-203ENST00000505551 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
LETM1-203ENST00000505551 TMF1P82094 1093 aa16.7■□□□□ 0.26
LETM1-203ENST00000505551 KCNG1Q9UIX4 513 aa16.7■□□□□ 0.26
LETM1-203ENST00000505551 INO80Q9ULG1 1556 aaPredicted RBP16.7■□□□□ 0.26
LETM1-203ENST00000505551 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
LETM1-203ENST00000505551 CHRM1P11229 460 aaPredicted RBP16.69■□□□□ 0.26
LETM1-203ENST00000505551 CLUAP1Q96AJ1 413 aa16.69■□□□□ 0.26
LETM1-203ENST00000505551 FAM13BQ9NYF5 915 aa16.69■□□□□ 0.26
LETM1-203ENST00000505551 TRPM1Q7Z4N2 1603 aa16.69■□□□□ 0.26
LETM1-203ENST00000505551 DDIT3P35638 169 aa16.69■□□□□ 0.26
LETM1-203ENST00000505551 PDE3AQ14432 1141 aa16.69■□□□□ 0.26
LETM1-203ENST00000505551 UTP14CQ5TAP6 766 aaKnown RBP16.69■□□□□ 0.26
LETM1-203ENST00000505551 KIDINS220Q9ULH0 1771 aa16.68■□□□□ 0.26
LETM1-203ENST00000505551 IGSF3O75054 1194 aa16.68■□□□□ 0.26
LETM1-203ENST00000505551 POGZQ7Z3K3 1410 aa16.67■□□□□ 0.26
LETM1-203ENST00000505551 BCAR3O75815 825 aa16.67■□□□□ 0.26
LETM1-203ENST00000505551 GPRASP1Q5JY77 1395 aa16.66■□□□□ 0.26
LETM1-203ENST00000505551 PTPRTO14522 1441 aa16.66■□□□□ 0.26
LETM1-203ENST00000505551 SKOR2Q2VWA4 1001 aaPredicted RBP16.66■□□□□ 0.26
LETM1-203ENST00000505551 CLTCL1P53675 1640 aa16.66■□□□□ 0.26
LETM1-203ENST00000505551 MSNP26038 577 aaKnown RBP16.66■□□□□ 0.26
LETM1-203ENST00000505551 TMEM132EQ6IEE7 984 aa16.65■□□□□ 0.26
LETM1-203ENST00000505551 R3HCC1Q9Y3T6 440 aaKnown RBP16.64■□□□□ 0.25
LETM1-203ENST00000505551 PTMSP20962 102 aa16.64■□□□□ 0.25
LETM1-203ENST00000505551 DMTNQ08495 405 aa16.64■□□□□ 0.25
LETM1-203ENST00000505551 HS1BP3Q53T59 392 aa16.63■□□□□ 0.25
LETM1-203ENST00000505551 TRPM2O94759 1503 aa16.63■□□□□ 0.25
LETM1-203ENST00000505551 PRDM15P57071 1507 aaPredicted RBP16.63■□□□□ 0.25
LETM1-203ENST00000505551 DYNC1I1O14576 645 aa16.63■□□□□ 0.25
LETM1-203ENST00000505551 NASPP49321 788 aaPredicted RBP16.63■□□□□ 0.25
LETM1-203ENST00000505551 ZNF500O60304 480 aaPredicted RBP16.62■□□□□ 0.25
LETM1-203ENST00000505551 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
LETM1-203ENST00000505551 C22orf23Q9BZE7 217 aa16.62■□□□□ 0.25
LETM1-203ENST00000505551 IBTKQ9P2D0 1353 aaPredicted RBP16.62■□□□□ 0.25
LETM1-203ENST00000505551 UQCRHLA0A096LP55 91 aa16.62■□□□□ 0.25
LETM1-203ENST00000505551 UQCRHP07919 91 aa16.62■□□□□ 0.25
LETM1-203ENST00000505551 MLECQ14165 292 aa16.62■□□□□ 0.25
LETM1-203ENST00000505551 TRAK1Q9UPV9 953 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms