RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 DEFB132Q7Z7B7 95 aa17.64■□□□□ 0.41
CCHCR1-219ENST00000505392 NEXMIFQ5QGS0 1516 aa17.63■□□□□ 0.41
CCHCR1-219ENST00000505392 UNC5CLQ8IV45 518 aa17.63■□□□□ 0.41
CCHCR1-219ENST00000505392 LAMC1P11047 1609 aa17.62■□□□□ 0.41
CCHCR1-219ENST00000505392 NUTM2FA1L443 756 aa17.62■□□□□ 0.41
CCHCR1-219ENST00000505392 MYOM2P54296 1465 aa17.62■□□□□ 0.41
CCHCR1-219ENST00000505392 SF3B2Q13435 895 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-219ENST00000505392 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
CCHCR1-219ENST00000505392 SPHKAPQ2M3C7 1700 aa17.6■□□□□ 0.41
CCHCR1-219ENST00000505392 BLMP54132 1417 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-219ENST00000505392 RPGRIP1LQ68CZ1 1315 aa17.59■□□□□ 0.41
CCHCR1-219ENST00000505392 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.4
CCHCR1-219ENST00000505392 COL22A1Q8NFW1 1626 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-219ENST00000505392 PPARGC1BQ86YN6 1023 aaKnown RBP17.57■□□□□ 0.4
CCHCR1-219ENST00000505392 SEPT12Q8IYM1 358 aa17.57■□□□□ 0.4
CCHCR1-219ENST00000505392 CLTCL1P53675 1640 aa17.57■□□□□ 0.4
CCHCR1-219ENST00000505392 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
CCHCR1-219ENST00000505392 STK26Q9P289 416 aa17.56■□□□□ 0.4
CCHCR1-219ENST00000505392 PXDNQ92626 1479 aa17.56■□□□□ 0.4
CCHCR1-219ENST00000505392 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
CCHCR1-219ENST00000505392 PRAG1Q86YV5 1406 aa17.54■□□□□ 0.4
CCHCR1-219ENST00000505392 SPATA31A3Q5VYP0 1347 aa17.53■□□□□ 0.4
CCHCR1-219ENST00000505392 HAP1P54257 671 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-219ENST00000505392 KRT28Q7Z3Y7 464 aa17.53■□□□□ 0.4
CCHCR1-219ENST00000505392 CCDC9Q9Y3X0 531 aaKnown RBP17.53■□□□□ 0.4
CCHCR1-219ENST00000505392 SLIT2O94813 1529 aa17.52■□□□□ 0.4
CCHCR1-219ENST00000505392 PLEKHG5O94827 1062 aa17.52■□□□□ 0.4
CCHCR1-219ENST00000505392 PSDA5PKW4 1024 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-219ENST00000505392 ONECUT3O60422 494 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-219ENST00000505392 VPS72Q15906 364 aa17.51■□□□□ 0.39
CCHCR1-219ENST00000505392 KRT27Q7Z3Y8 459 aa17.51■□□□□ 0.39
CCHCR1-219ENST00000505392 CABLES1Q8TDN4 633 aa17.51■□□□□ 0.39
CCHCR1-219ENST00000505392 NAIPQ13075 1403 aa17.5■□□□□ 0.39
CCHCR1-219ENST00000505392 ADGRF5Q8IZF2 1346 aa17.49■□□□□ 0.39
CCHCR1-219ENST00000505392 GLI3P10071 1580 aa17.49■□□□□ 0.39
CCHCR1-219ENST00000505392 KIF1BO60333 1816 aa17.49■□□□□ 0.39
CCHCR1-219ENST00000505392 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
CCHCR1-219ENST00000505392 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
CCHCR1-219ENST00000505392 HRCP23327 699 aa17.47■□□□□ 0.39
CCHCR1-219ENST00000505392 BAG6P46379 1132 aa17.47■□□□□ 0.39
CCHCR1-219ENST00000505392 PSME1Q06323 249 aa17.47■□□□□ 0.39
CCHCR1-219ENST00000505392 RGL3Q3MIN7 710 aa17.47■□□□□ 0.39
CCHCR1-219ENST00000505392 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
CCHCR1-219ENST00000505392 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
CCHCR1-219ENST00000505392 PLEKHH1Q9ULM0 1364 aa17.46■□□□□ 0.39
CCHCR1-219ENST00000505392 A0A0G2JS52 829 aa17.46■□□□□ 0.39
CCHCR1-219ENST00000505392 MYT1Q01538 1121 aa17.46■□□□□ 0.39
CCHCR1-219ENST00000505392 MARF1Q9Y4F3 1742 aaKnown RBP17.46■□□□□ 0.39
CCHCR1-219ENST00000505392 FAM83GA6ND36 823 aa17.45■□□□□ 0.38
CCHCR1-219ENST00000505392 ABCC11Q96J66 1382 aa17.44■□□□□ 0.38
CCHCR1-219ENST00000505392 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
CCHCR1-219ENST00000505392 CCDC144AA2RUR9 1427 aa17.44■□□□□ 0.38
CCHCR1-219ENST00000505392 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.43■□□□□ 0.38
CCHCR1-219ENST00000505392 EN1Q05925 392 aaPredicted RBP17.42■□□□□ 0.38
CCHCR1-219ENST00000505392 FAM98CQ17RN3 349 aaKnown RBP17.42■□□□□ 0.38
CCHCR1-219ENST00000505392 BRWD3Q6RI45 1802 aa17.41■□□□□ 0.38
CCHCR1-219ENST00000505392 TECPR2O15040 1411 aa17.4■□□□□ 0.38
CCHCR1-219ENST00000505392 R3HDM1Q15032 1099 aaKnown RBP17.39■□□□□ 0.37
CCHCR1-219ENST00000505392 FAM182BQ5T319 152 aa17.39■□□□□ 0.37
CCHCR1-219ENST00000505392 SIRT1Q96EB6 747 aa17.39■□□□□ 0.37
CCHCR1-219ENST00000505392 TNS3Q68CZ2 1445 aa17.38■□□□□ 0.37
CCHCR1-219ENST00000505392 RRBP1Q9P2E9 1410 aaKnown RBP17.38■□□□□ 0.37
CCHCR1-219ENST00000505392 BTG4Q9NY30 223 aa17.38■□□□□ 0.37
CCHCR1-219ENST00000505392 LRP5O75197 1615 aa17.38■□□□□ 0.37
CCHCR1-219ENST00000505392 USP32Q8NFA0 1604 aa17.38■□□□□ 0.37
CCHCR1-219ENST00000505392 PMFBP1Q8TBY8 1022 aa17.37■□□□□ 0.37
CCHCR1-219ENST00000505392 PPLO60437 1756 aa17.37■□□□□ 0.37
CCHCR1-219ENST00000505392 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
CCHCR1-219ENST00000505392 ANKRD30BQ9BXX2 1392 aa17.36■□□□□ 0.37
CCHCR1-219ENST00000505392 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
CCHCR1-219ENST00000505392 ARHGEF10O15013 1369 aa17.35■□□□□ 0.37
CCHCR1-219ENST00000505392 YTHDC2Q9H6S0 1430 aaKnown RBP17.35■□□□□ 0.37
CCHCR1-219ENST00000505392 EZH2Q15910 746 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-219ENST00000505392 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.36
CCHCR1-219ENST00000505392 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
CCHCR1-219ENST00000505392 KIF1AQ12756 1690 aa17.32■□□□□ 0.36
CCHCR1-219ENST00000505392 FMN2Q9NZ56 1722 aa17.31■□□□□ 0.36
CCHCR1-219ENST00000505392 CFAP70Q5T0N1 1121 aa17.31■□□□□ 0.36
CCHCR1-219ENST00000505392 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
CCHCR1-219ENST00000505392 NRXN1Q9ULB1 1477 aa17.3■□□□□ 0.36
CCHCR1-219ENST00000505392 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
CCHCR1-219ENST00000505392 DHX57Q6P158 1386 aaKnown RBP17.29■□□□□ 0.36
CCHCR1-219ENST00000505392 SPATA31A5Q5VU36 1347 aa17.29■□□□□ 0.36
CCHCR1-219ENST00000505392 SPATA31A7Q8IWB4 1347 aa17.29■□□□□ 0.36
CCHCR1-219ENST00000505392 POGKQ9P215 609 aa17.29■□□□□ 0.36
CCHCR1-219ENST00000505392 NWD2Q9ULI1 1742 aa17.29■□□□□ 0.36
CCHCR1-219ENST00000505392 TRIM37O94972 964 aa17.28■□□□□ 0.36
CCHCR1-219ENST00000505392 CAMKK2Q96RR4 588 aa17.28■□□□□ 0.36
CCHCR1-219ENST00000505392 MPHOSPH9Q99550 1183 aa17.28■□□□□ 0.36
CCHCR1-219ENST00000505392 PLCH1Q4KWH8 1693 aa17.28■□□□□ 0.36
CCHCR1-219ENST00000505392 APBA3O96018 575 aa17.26■□□□□ 0.35
CCHCR1-219ENST00000505392 YY1P25490 414 aa17.26■□□□□ 0.35
CCHCR1-219ENST00000505392 FAM196AQ6ZSG2 479 aa17.26■□□□□ 0.35
CCHCR1-219ENST00000505392 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-219ENST00000505392 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
CCHCR1-219ENST00000505392 GPRASP1Q5JY77 1395 aa17.25■□□□□ 0.35
CCHCR1-219ENST00000505392 KNDC1Q76NI1 1749 aa17.24■□□□□ 0.35
CCHCR1-219ENST00000505392 PAK3O75914 559 aaPredicted RBP17.24■□□□□ 0.35
CCHCR1-219ENST00000505392 PRDM11Q9NQV5 511 aa17.24■□□□□ 0.35
CCHCR1-219ENST00000505392 DISP2A7MBM2 1401 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms