RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 DRC7Q8IY82 874 aa20.41■□□□□ 0.86
ITGA3-204ENST00000505306 CHAF1AQ13111 956 aaPredicted RBP20.41■□□□□ 0.86
ITGA3-204ENST00000505306 BICRAQ9NZM4 1560 aa20.41■□□□□ 0.86
ITGA3-204ENST00000505306 PLIN1O60240 522 aa20.4■□□□□ 0.86
ITGA3-204ENST00000505306 AKAP17AQ02040 695 aaKnown RBP20.4■□□□□ 0.86
ITGA3-204ENST00000505306 GBP4Q96PP9 640 aa20.4■□□□□ 0.86
ITGA3-204ENST00000505306 KIF3AQ9Y496 699 aa20.4■□□□□ 0.86
ITGA3-204ENST00000505306 ERBINQ96RT1 1412 aa20.4■□□□□ 0.86
ITGA3-204ENST00000505306 SLC12A5Q9H2X9 1139 aa20.4■□□□□ 0.86
ITGA3-204ENST00000505306 KIF16BQ96L93 1317 aa20.4■□□□□ 0.86
ITGA3-204ENST00000505306 SYNE3Q6ZMZ3 975 aa20.39■□□□□ 0.85
ITGA3-204ENST00000505306 GRIN2AQ12879 1464 aa20.39■□□□□ 0.85
ITGA3-204ENST00000505306 KIF6Q6ZMV9 814 aa20.38■□□□□ 0.85
ITGA3-204ENST00000505306 DDX19BQ9UMR2 479 aa20.38■□□□□ 0.85
ITGA3-204ENST00000505306 HSP90AA2PQ14568 343 aaPredicted RBP20.38■□□□□ 0.85
ITGA3-204ENST00000505306 CWC22Q9HCG8 908 aaKnown RBP20.38■□□□□ 0.85
ITGA3-204ENST00000505306 IQGAP2Q13576 1575 aa20.38■□□□□ 0.85
ITGA3-204ENST00000505306 CABP4P57796 275 aa20.37■□□□□ 0.85
ITGA3-204ENST00000505306 ARHGEF11O15085 1522 aa20.37■□□□□ 0.85
ITGA3-204ENST00000505306 ARID3AQ99856 593 aa20.37■□□□□ 0.85
ITGA3-204ENST00000505306 CDK13Q14004 1512 aaKnown RBP20.37■□□□□ 0.85
ITGA3-204ENST00000505306 ZC3H6P61129 1189 aaKnown RBP20.37■□□□□ 0.85
ITGA3-204ENST00000505306 ROCK1Q13464 1354 aa20.37■□□□□ 0.85
ITGA3-204ENST00000505306 DZIP1LQ8IYY4 767 aaKnown RBP20.37■□□□□ 0.85
ITGA3-204ENST00000505306 EXOC6Q8TAG9 804 aa20.37■□□□□ 0.85
ITGA3-204ENST00000505306 ADGRL1O94910 1474 aa20.36■□□□□ 0.85
ITGA3-204ENST00000505306 PRKAR2BP31323 418 aa20.36■□□□□ 0.85
ITGA3-204ENST00000505306 CCDC7Q96M83 1385 aa20.36■□□□□ 0.85
ITGA3-204ENST00000505306 KIAA1107Q9UPP5 1409 aa20.36■□□□□ 0.85
ITGA3-204ENST00000505306 DHX16O60231 1041 aaKnown RBP20.36■□□□□ 0.85
ITGA3-204ENST00000505306 NEUROD6Q96NK8 337 aa20.36■□□□□ 0.85
ITGA3-204ENST00000505306 SPG7Q9UQ90 795 aa20.36■□□□□ 0.85
ITGA3-204ENST00000505306 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
ITGA3-204ENST00000505306 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
ITGA3-204ENST00000505306 ST18O60284 1047 aa20.34■□□□□ 0.85
ITGA3-204ENST00000505306 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
ITGA3-204ENST00000505306 RUFY2Q8WXA3 655 aa20.34■□□□□ 0.85
ITGA3-204ENST00000505306 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
ITGA3-204ENST00000505306 EPRSP07814 1512 aaKnown RBP20.34■□□□□ 0.85
ITGA3-204ENST00000505306 PTMSP20962 102 aa20.33■□□□□ 0.85
ITGA3-204ENST00000505306 TCEAL9Q9UHQ7 104 aa20.33■□□□□ 0.85
ITGA3-204ENST00000505306 SULT6B1Q6IMI4 303 aa20.33■□□□□ 0.85
ITGA3-204ENST00000505306 VSIG10Q8N0Z9 540 aa20.33■□□□□ 0.84
ITGA3-204ENST00000505306 HSP90AB4PQ58FF6 505 aa20.33■□□□□ 0.84
ITGA3-204ENST00000505306 RRP1P56182 461 aaKnown RBP20.32■□□□□ 0.84
ITGA3-204ENST00000505306 DAPK1P53355 1430 aa20.32■□□□□ 0.84
ITGA3-204ENST00000505306 SAMD1Q6SPF0 538 aaPredicted RBP20.32■□□□□ 0.84
ITGA3-204ENST00000505306 SF3A1Q15459 793 aaKnown RBP20.32■□□□□ 0.84
ITGA3-204ENST00000505306 FOXD4L1Q9NU39 408 aa20.31■□□□□ 0.84
ITGA3-204ENST00000505306 CCDC30Q5VVM6 783 aa20.31■□□□□ 0.84
ITGA3-204ENST00000505306 CPLX2Q6PUV4 134 aaKnown RBP20.31■□□□□ 0.84
ITGA3-204ENST00000505306 UBTFL1P0CB47 393 aaPredicted RBP20.31■□□□□ 0.84
ITGA3-204ENST00000505306 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
ITGA3-204ENST00000505306 ZNF608Q9ULD9 1512 aaPredicted RBP20.3■□□□□ 0.84
ITGA3-204ENST00000505306 CCDC27Q2M243 656 aa20.3■□□□□ 0.84
ITGA3-204ENST00000505306 FAM161AQ3B820 660 aa20.3■□□□□ 0.84
ITGA3-204ENST00000505306 ADAMTS2O95450 1211 aa20.3■□□□□ 0.84
ITGA3-204ENST00000505306 CHMP4CQ96CF2 233 aa20.3■□□□□ 0.84
ITGA3-204ENST00000505306 FBXO31Q5XUX0 539 aaPredicted RBP20.3■□□□□ 0.84
ITGA3-204ENST00000505306 FAM184AQ8NB25 1140 aa20.3■□□□□ 0.84
ITGA3-204ENST00000505306 TRDNQ13061 729 aa20.3■□□□□ 0.84
ITGA3-204ENST00000505306 NUDT16Q96DE0 195 aaKnown RBP20.29■□□□□ 0.84
ITGA3-204ENST00000505306 H3BQV1 296 aa20.29■□□□□ 0.84
ITGA3-204ENST00000505306 IFFO2Q5TF58 517 aa20.29■□□□□ 0.84
ITGA3-204ENST00000505306 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
ITGA3-204ENST00000505306 CCDC141Q6ZP82 1450 aa20.29■□□□□ 0.84
ITGA3-204ENST00000505306 CCDC61Q9Y6R9 512 aa20.28■□□□□ 0.84
ITGA3-204ENST00000505306 TCP11L2Q8N4U5 519 aa20.28■□□□□ 0.84
ITGA3-204ENST00000505306 CRBNQ96SW2 442 aa20.28■□□□□ 0.84
ITGA3-204ENST00000505306 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
ITGA3-204ENST00000505306 ZKSCAN1P17029 563 aaPredicted RBP20.28■□□□□ 0.84
ITGA3-204ENST00000505306 ANO8Q9HCE9 1232 aaPredicted RBP20.28■□□□□ 0.84
ITGA3-204ENST00000505306 CREBRFQ8IUR6 639 aa20.27■□□□□ 0.84
ITGA3-204ENST00000505306 FYB1O15117 783 aa20.27■□□□□ 0.84
ITGA3-204ENST00000505306 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
ITGA3-204ENST00000505306 CENPQQ7L2Z9 268 aaPredicted RBP20.26■□□□□ 0.83
ITGA3-204ENST00000505306 WAPLQ7Z5K2 1190 aa20.26■□□□□ 0.83
ITGA3-204ENST00000505306 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
ITGA3-204ENST00000505306 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
ITGA3-204ENST00000505306 CSPP1Q1MSJ5 1256 aa20.26■□□□□ 0.83
ITGA3-204ENST00000505306 TPM4P67936 248 aa20.26■□□□□ 0.83
ITGA3-204ENST00000505306 ATAD2Q6PL18 1390 aa20.26■□□□□ 0.83
ITGA3-204ENST00000505306 NGLY1Q96IV0 654 aa20.25■□□□□ 0.83
ITGA3-204ENST00000505306 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
ITGA3-204ENST00000505306 WASHC4Q2M389 1173 aa20.25■□□□□ 0.83
ITGA3-204ENST00000505306 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
ITGA3-204ENST00000505306 RRS1Q15050 365 aaKnown RBP20.24■□□□□ 0.83
ITGA3-204ENST00000505306 KCNH5Q8NCM2 988 aa20.24■□□□□ 0.83
ITGA3-204ENST00000505306 PPP2R1AP30153 589 aa20.24■□□□□ 0.83
ITGA3-204ENST00000505306 CNTLNQ9NXG0 1405 aa20.24■□□□□ 0.83
ITGA3-204ENST00000505306 ERC2O15083 957 aa20.23■□□□□ 0.83
ITGA3-204ENST00000505306 ERICH2A1L162 156 aa20.23■□□□□ 0.83
ITGA3-204ENST00000505306 FOXO3O43524 673 aa20.23■□□□□ 0.83
ITGA3-204ENST00000505306 HDGFL1Q5TGJ6 251 aa20.23■□□□□ 0.83
ITGA3-204ENST00000505306 CPLX1O14810 134 aa20.23■□□□□ 0.83
ITGA3-204ENST00000505306 FOXD4L5Q5VV16 416 aaPredicted RBP20.22■□□□□ 0.83
ITGA3-204ENST00000505306 PNISRQ8TF01 805 aaKnown RBP20.22■□□□□ 0.83
ITGA3-204ENST00000505306 FOXD4L4Q8WXT5 416 aaPredicted RBP20.22■□□□□ 0.83
ITGA3-204ENST00000505306 NFXL1Q6ZNB6 911 aa20.22■□□□□ 0.83
ITGA3-204ENST00000505306 ANO2Q9NQ90 1003 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms