RNA–Protein interactions for RNA: ENST00000505205.1

TRIM23-204, Transcript of tripartite motif containing 23, humanhuman

TSL 3

Gene TRIM23, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-204ENST00000505205 C1orf167Q5SNV9 1468 aa14.18□□□□□ -0.14
TRIM23-204ENST00000505205 ZRANB1Q9UGI0 708 aa14.17□□□□□ -0.14
TRIM23-204ENST00000505205 COL22A1Q8NFW1 1626 aaPredicted RBP14.16□□□□□ -0.14
TRIM23-204ENST00000505205 TRPC5Q9UL62 973 aaPredicted RBP14.16□□□□□ -0.14
TRIM23-204ENST00000505205 NUP155O75694 1391 aa14.16□□□□□ -0.14
TRIM23-204ENST00000505205 ATRNO75882 1429 aa14.15□□□□□ -0.14
TRIM23-204ENST00000505205 PTCH1Q13635 1447 aa14.15□□□□□ -0.14
TRIM23-204ENST00000505205 RNF39Q9H2S5 420 aa14.15□□□□□ -0.14
TRIM23-204ENST00000505205 NEXMIFQ5QGS0 1516 aa14.15□□□□□ -0.14
TRIM23-204ENST00000505205 SOS2Q07890 1332 aaPredicted RBP14.15□□□□□ -0.15
TRIM23-204ENST00000505205 ZNF326Q5BKZ1 582 aaKnown RBP14.14□□□□□ -0.15
TRIM23-204ENST00000505205 FNBP4Q8N3X1 1017 aaPredicted RBP14.14□□□□□ -0.15
TRIM23-204ENST00000505205 ORAI2Q96SN7 254 aa14.14□□□□□ -0.15
TRIM23-204ENST00000505205 MARF1Q9Y4F3 1742 aaKnown RBP14.13□□□□□ -0.15
TRIM23-204ENST00000505205 ROCK1Q13464 1354 aa14.13□□□□□ -0.15
TRIM23-204ENST00000505205 CLTCL1P53675 1640 aa14.12□□□□□ -0.15
TRIM23-204ENST00000505205 MYOM2P54296 1465 aa14.11□□□□□ -0.15
TRIM23-204ENST00000505205 ROBO2Q9HCK4 1378 aa14.1□□□□□ -0.15
TRIM23-204ENST00000505205 BCL9LQ86UU0 1499 aa14.1□□□□□ -0.15
TRIM23-204ENST00000505205 KIF1BO60333 1816 aa14.08□□□□□ -0.15
TRIM23-204ENST00000505205 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
TRIM23-204ENST00000505205 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.07□□□□□ -0.16
TRIM23-204ENST00000505205 PXDNQ92626 1479 aa14.06□□□□□ -0.16
TRIM23-204ENST00000505205 BRWD3Q6RI45 1802 aa14.06□□□□□ -0.16
TRIM23-204ENST00000505205 GLI3P10071 1580 aa14.05□□□□□ -0.16
TRIM23-204ENST00000505205 GJD4Q96KN9 370 aaPredicted RBP14.05□□□□□ -0.16
TRIM23-204ENST00000505205 PRAG1Q86YV5 1406 aa14.05□□□□□ -0.16
TRIM23-204ENST00000505205 ITGAEP38570 1179 aa14.04□□□□□ -0.16
TRIM23-204ENST00000505205 BLMP54132 1417 aaPredicted RBP14.04□□□□□ -0.16
TRIM23-204ENST00000505205 CDC42BPGQ6DT37 1551 aa14.04□□□□□ -0.16
TRIM23-204ENST00000505205 XPCQ01831 940 aaPredicted RBP14.03□□□□□ -0.16
TRIM23-204ENST00000505205 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
TRIM23-204ENST00000505205 RALGAPBQ86X10 1494 aa14.03□□□□□ -0.16
TRIM23-204ENST00000505205 LRP5O75197 1615 aa14.03□□□□□ -0.16
TRIM23-204ENST00000505205 HFM1A2PYH4 1435 aa14.02□□□□□ -0.16
TRIM23-204ENST00000505205 ESCO1Q5FWF5 840 aa14.02□□□□□ -0.17
TRIM23-204ENST00000505205 DEFB132Q7Z7B7 95 aa14.02□□□□□ -0.17
TRIM23-204ENST00000505205 SLIT2O94813 1529 aa14□□□□□ -0.17
TRIM23-204ENST00000505205 FOXO3O43524 673 aa14□□□□□ -0.17
TRIM23-204ENST00000505205 PPLO60437 1756 aa14□□□□□ -0.17
TRIM23-204ENST00000505205 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
TRIM23-204ENST00000505205 UNC5CLQ8IV45 518 aa13.99□□□□□ -0.17
TRIM23-204ENST00000505205 USP32Q8NFA0 1604 aa13.99□□□□□ -0.17
TRIM23-204ENST00000505205 SAMD1Q6SPF0 538 aaPredicted RBP13.97□□□□□ -0.17
TRIM23-204ENST00000505205 NAIPQ13075 1403 aa13.97□□□□□ -0.17
TRIM23-204ENST00000505205 PLCH1Q4KWH8 1693 aa13.96□□□□□ -0.17
TRIM23-204ENST00000505205 NUTM2FA1L443 756 aa13.96□□□□□ -0.17
TRIM23-204ENST00000505205 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
TRIM23-204ENST00000505205 LRPPRCP42704 1394 aaKnown RBP13.96□□□□□ -0.18
TRIM23-204ENST00000505205 FMN2Q9NZ56 1722 aa13.95□□□□□ -0.18
TRIM23-204ENST00000505205 SF3B2Q13435 895 aaKnown RBP13.95□□□□□ -0.18
TRIM23-204ENST00000505205 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
TRIM23-204ENST00000505205 SEPT12Q8IYM1 358 aa13.94□□□□□ -0.18
TRIM23-204ENST00000505205 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
TRIM23-204ENST00000505205 ABCA3Q99758 1704 aa13.93□□□□□ -0.18
TRIM23-204ENST00000505205 NWD2Q9ULI1 1742 aa13.93□□□□□ -0.18
TRIM23-204ENST00000505205 PSDA5PKW4 1024 aaPredicted RBP13.93□□□□□ -0.18
TRIM23-204ENST00000505205 RPGRIP1LQ68CZ1 1315 aa13.92□□□□□ -0.18
TRIM23-204ENST00000505205 KNDC1Q76NI1 1749 aa13.92□□□□□ -0.18
TRIM23-204ENST00000505205 RGPD8O14715 1765 aaPredicted RBP13.91□□□□□ -0.18
TRIM23-204ENST00000505205 CCDC144AA2RUR9 1427 aa13.91□□□□□ -0.18
TRIM23-204ENST00000505205 VPS72Q15906 364 aa13.91□□□□□ -0.18
TRIM23-204ENST00000505205 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
TRIM23-204ENST00000505205 PLEKHH1Q9ULM0 1364 aa13.91□□□□□ -0.18
TRIM23-204ENST00000505205 TECPR2O15040 1411 aa13.9□□□□□ -0.18
TRIM23-204ENST00000505205 ATXN8OSP0DMR3 200 aa13.9□□□□□ -0.18
TRIM23-204ENST00000505205 HRCP23327 699 aa13.9□□□□□ -0.18
TRIM23-204ENST00000505205 KRT27Q7Z3Y8 459 aa13.9□□□□□ -0.18
TRIM23-204ENST00000505205 CABLES1Q8TDN4 633 aa13.9□□□□□ -0.18
TRIM23-204ENST00000505205 STK26Q9P289 416 aa13.9□□□□□ -0.18
TRIM23-204ENST00000505205 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
TRIM23-204ENST00000505205 ONECUT3O60422 494 aaPredicted RBP13.89□□□□□ -0.19
TRIM23-204ENST00000505205 PLEKHG5O94827 1062 aa13.89□□□□□ -0.19
TRIM23-204ENST00000505205 KRT28Q7Z3Y7 464 aa13.89□□□□□ -0.19
TRIM23-204ENST00000505205 CCDC9Q9Y3X0 531 aaKnown RBP13.89□□□□□ -0.19
TRIM23-204ENST00000505205 TNS3Q68CZ2 1445 aa13.89□□□□□ -0.19
TRIM23-204ENST00000505205 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
TRIM23-204ENST00000505205 NRAPQ86VF7 1730 aa13.88□□□□□ -0.19
TRIM23-204ENST00000505205 HAP1P54257 671 aaPredicted RBP13.88□□□□□ -0.19
TRIM23-204ENST00000505205 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
TRIM23-204ENST00000505205 RGPD1P0DJD0 1748 aa13.87□□□□□ -0.19
TRIM23-204ENST00000505205 BAG6P46379 1132 aa13.87□□□□□ -0.19
TRIM23-204ENST00000505205 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
TRIM23-204ENST00000505205 ABCC11Q96J66 1382 aa13.85□□□□□ -0.19
TRIM23-204ENST00000505205 A0A0G2JS52 829 aa13.85□□□□□ -0.19
TRIM23-204ENST00000505205 MYT1Q01538 1121 aa13.85□□□□□ -0.19
TRIM23-204ENST00000505205 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
TRIM23-204ENST00000505205 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
TRIM23-204ENST00000505205 TNS1Q9HBL0 1735 aaKnown RBP13.84□□□□□ -0.19
TRIM23-204ENST00000505205 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
TRIM23-204ENST00000505205 EN1Q05925 392 aaPredicted RBP13.83□□□□□ -0.2
TRIM23-204ENST00000505205 FAM98CQ17RN3 349 aaKnown RBP13.83□□□□□ -0.2
TRIM23-204ENST00000505205 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
TRIM23-204ENST00000505205 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
TRIM23-204ENST00000505205 YTHDC2Q9H6S0 1430 aaKnown RBP13.82□□□□□ -0.2
TRIM23-204ENST00000505205 NRXN1Q9ULB1 1477 aa13.82□□□□□ -0.2
TRIM23-204ENST00000505205 PSME1Q06323 249 aa13.82□□□□□ -0.2
TRIM23-204ENST00000505205 R3HDM1Q15032 1099 aaKnown RBP13.82□□□□□ -0.2
TRIM23-204ENST00000505205 FAM182BQ5T319 152 aa13.82□□□□□ -0.2
TRIM23-204ENST00000505205 SBNO1A3KN83 1393 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms