RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 C14orf93Q9H972 538 aaKnown RBP20.72■□□□□ 0.91
DDX41-205ENST00000505081 MYO3AQ8NEV4 1616 aa20.72■□□□□ 0.91
DDX41-205ENST00000505081 ADGRB3O60242 1522 aa20.72■□□□□ 0.91
DDX41-205ENST00000505081 NPATQ14207 1427 aa20.72■□□□□ 0.91
DDX41-205ENST00000505081 MTHFSP49914 203 aa20.71■□□□□ 0.91
DDX41-205ENST00000505081 NFKBIBQ15653 356 aa20.71■□□□□ 0.91
DDX41-205ENST00000505081 SHPRHQ149N8 1683 aa20.71■□□□□ 0.91
DDX41-205ENST00000505081 CLUAP1Q96AJ1 413 aa20.7■□□□□ 0.9
DDX41-205ENST00000505081 RUNDC1Q96C34 613 aa20.7■□□□□ 0.9
DDX41-205ENST00000505081 PDE3AQ14432 1141 aa20.69■□□□□ 0.9
DDX41-205ENST00000505081 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
DDX41-205ENST00000505081 SAFB2Q14151 953 aaKnown RBP eCLIP20.69■□□□□ 0.9
DDX41-205ENST00000505081 CGNL1Q0VF96 1302 aa20.69■□□□□ 0.9
DDX41-205ENST00000505081 QRICH2Q9H0J4 1663 aa20.68■□□□□ 0.9
DDX41-205ENST00000505081 SEC24BO95487 1268 aa20.68■□□□□ 0.9
DDX41-205ENST00000505081 RLBP1P12271 317 aa20.68■□□□□ 0.9
DDX41-205ENST00000505081 RARSP54136 660 aaKnown RBP20.67■□□□□ 0.9
DDX41-205ENST00000505081 ADGRB1O14514 1584 aa20.67■□□□□ 0.9
DDX41-205ENST00000505081 LMTK2Q8IWU2 1503 aa20.67■□□□□ 0.9
DDX41-205ENST00000505081 ZNF518AQ6AHZ1 1483 aa20.67■□□□□ 0.9
DDX41-205ENST00000505081 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
DDX41-205ENST00000505081 SETBP1Q9Y6X0 1596 aa20.66■□□□□ 0.9
DDX41-205ENST00000505081 PPLO60437 1756 aa20.65■□□□□ 0.9
DDX41-205ENST00000505081 CABP2Q9NPB3 220 aa20.65■□□□□ 0.9
DDX41-205ENST00000505081 ZC3H13Q5T200 1668 aaKnown RBP20.64■□□□□ 0.89
DDX41-205ENST00000505081 USP19O94966 1318 aa20.64■□□□□ 0.89
DDX41-205ENST00000505081 FRMPD1Q5SYB0 1578 aa20.64■□□□□ 0.89
DDX41-205ENST00000505081 PCDHB15Q9Y5E8 787 aa20.64■□□□□ 0.89
DDX41-205ENST00000505081 IQSEC2Q5JU85 1478 aa20.63■□□□□ 0.89
DDX41-205ENST00000505081 RTN4Q9NQC3 1192 aaKnown RBP20.62■□□□□ 0.89
DDX41-205ENST00000505081 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
DDX41-205ENST00000505081 U2AF1L5P0DN76 240 aaPredicted RBP20.61■□□□□ 0.89
DDX41-205ENST00000505081 U2AF1Q01081 240 aaKnown RBP eCLIP20.61■□□□□ 0.893e-7■■■■□ 19.9
DDX41-205ENST00000505081 FRAT2O75474 233 aaPredicted RBP20.6■□□□□ 0.89
DDX41-205ENST00000505081 RAPGEF3O95398 923 aa20.6■□□□□ 0.89
DDX41-205ENST00000505081 STK26Q9P289 416 aa20.6■□□□□ 0.89
DDX41-205ENST00000505081 CFAP53Q96M91 514 aa20.59■□□□□ 0.89
DDX41-205ENST00000505081 CD109Q6YHK3 1445 aa20.59■□□□□ 0.89
DDX41-205ENST00000505081 POGZQ7Z3K3 1410 aa20.59■□□□□ 0.89
DDX41-205ENST00000505081 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.89
DDX41-205ENST00000505081 WDR63Q8IWG1 891 aa20.58■□□□□ 0.89
DDX41-205ENST00000505081 GSE1Q14687 1217 aa20.58■□□□□ 0.88
DDX41-205ENST00000505081 NINLQ9Y2I6 1382 aa20.58■□□□□ 0.88
DDX41-205ENST00000505081 TULP4Q9NRJ4 1543 aa20.58■□□□□ 0.88
DDX41-205ENST00000505081 TSR2Q969E8 191 aaKnown RBP20.57■□□□□ 0.88
DDX41-205ENST00000505081 EVC2Q86UK5 1308 aa20.57■□□□□ 0.88
DDX41-205ENST00000505081 GLI2P10070 1586 aa20.57■□□□□ 0.88
DDX41-205ENST00000505081 ABCC3O15438 1527 aa20.56■□□□□ 0.88
DDX41-205ENST00000505081 SIGLEC1Q9BZZ2 1709 aa20.56■□□□□ 0.88
DDX41-205ENST00000505081 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
DDX41-205ENST00000505081 MAPK8IP3Q9UPT6 1336 aa20.55■□□□□ 0.88
DDX41-205ENST00000505081 GGNBP2Q9H3C7 697 aa20.55■□□□□ 0.88
DDX41-205ENST00000505081 PDZRN3Q9UPQ7 1066 aa20.55■□□□□ 0.88
DDX41-205ENST00000505081 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
DDX41-205ENST00000505081 HECW2Q9P2P5 1572 aa20.54■□□□□ 0.88
DDX41-205ENST00000505081 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
DDX41-205ENST00000505081 MLH3Q9UHC1 1453 aa20.53■□□□□ 0.88
DDX41-205ENST00000505081 VIRMAQ69YN4 1812 aaKnown RBP20.53■□□□□ 0.88
DDX41-205ENST00000505081 BRPF3Q9ULD4 1205 aa20.53■□□□□ 0.88
DDX41-205ENST00000505081 VGFO15240 615 aaPredicted RBP20.52■□□□□ 0.88
DDX41-205ENST00000505081 IDI1Q13907 227 aa20.52■□□□□ 0.88
DDX41-205ENST00000505081 CCDC27Q2M243 656 aa20.52■□□□□ 0.88
DDX41-205ENST00000505081 PMFBP1Q8TBY8 1022 aa20.52■□□□□ 0.88
DDX41-205ENST00000505081 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
DDX41-205ENST00000505081 ARHGEF28Q8N1W1 1705 aaKnown RBP20.51■□□□□ 0.87
DDX41-205ENST00000505081 USP32Q8NFA0 1604 aa20.51■□□□□ 0.87
DDX41-205ENST00000505081 MYH16Q9H6N6 1097 aa20.51■□□□□ 0.87
DDX41-205ENST00000505081 A0A1W2PP64 1363 aa20.5■□□□□ 0.87
DDX41-205ENST00000505081 CAMSAP1Q5T5Y3 1602 aa20.49■□□□□ 0.87
DDX41-205ENST00000505081 NEXMIFQ5QGS0 1516 aa20.49■□□□□ 0.87
DDX41-205ENST00000505081 SLKQ9H2G2 1235 aaPredicted RBP20.49■□□□□ 0.87
DDX41-205ENST00000505081 EXOSC9Q06265 439 aaKnown RBP20.49■□□□□ 0.87
DDX41-205ENST00000505081 NLRP1Q9C000 1473 aa20.49■□□□□ 0.87
DDX41-205ENST00000505081 MINK1Q8N4C8 1332 aaPredicted RBP20.49■□□□□ 0.87
DDX41-205ENST00000505081 MVPQ14764 893 aaKnown RBP20.48■□□□□ 0.87
DDX41-205ENST00000505081 ZKSCAN2Q63HK3 967 aa20.47■□□□□ 0.87
DDX41-205ENST00000505081 FTSJ3Q8IY81 847 aaKnown RBP20.47■□□□□ 0.87
DDX41-205ENST00000505081 PLEKHF1Q96S99 279 aa20.46■□□□□ 0.87
DDX41-205ENST00000505081 RWDD1Q9H446 243 aaPredicted RBP20.46■□□□□ 0.87
DDX41-205ENST00000505081 SMC4Q9NTJ3 1288 aa20.46■□□□□ 0.87
DDX41-205ENST00000505081 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
DDX41-205ENST00000505081 TMPOP42166 694 aaKnown RBP20.45■□□□□ 0.86
DDX41-205ENST00000505081 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
DDX41-205ENST00000505081 NSD2O96028 1365 aa20.44■□□□□ 0.86
DDX41-205ENST00000505081 SSH1Q8WYL5 1049 aa20.44■□□□□ 0.86
DDX41-205ENST00000505081 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
DDX41-205ENST00000505081 PRAM1Q96QH2 718 aa20.43■□□□□ 0.86
DDX41-205ENST00000505081 PIK3C2BO00750 1634 aa20.43■□□□□ 0.86
DDX41-205ENST00000505081 FYB1O15117 783 aa20.43■□□□□ 0.86
DDX41-205ENST00000505081 ABCC11Q96J66 1382 aa20.43■□□□□ 0.86
DDX41-205ENST00000505081 ADGRB2O60241 1585 aa20.43■□□□□ 0.86
DDX41-205ENST00000505081 TRIM27P14373 513 aa20.43■□□□□ 0.86
DDX41-205ENST00000505081 FBLN1P23142 703 aa20.43■□□□□ 0.86
DDX41-205ENST00000505081 CFAP74Q9C0B2 1584 aa20.41■□□□□ 0.86
DDX41-205ENST00000505081 ITPRIPQ8IWB1 547 aa20.41■□□□□ 0.86
DDX41-205ENST00000505081 AAMPQ13685 434 aa20.4■□□□□ 0.86
DDX41-205ENST00000505081 TBC1D32Q96NH3 1257 aa20.4■□□□□ 0.86
DDX41-205ENST00000505081 BECN1Q14457 450 aa20.4■□□□□ 0.86
DDX41-205ENST00000505081 SPRYD3Q8NCJ5 442 aa20.4■□□□□ 0.86
DDX41-205ENST00000505081 POGKQ9P215 609 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms