RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 SLC24A1O60721 1099 aa14.47□□□□□ -0.09
RFC1-210ENST00000505077 EIF4G2P78344 907 aaKnown RBP eCLIP14.47□□□□□ -0.09
RFC1-210ENST00000505077 CENPJQ9HC77 1338 aaPredicted RBP14.46□□□□□ -0.09
RFC1-210ENST00000505077 ADGRL3Q9HAR2 1447 aa14.45□□□□□ -0.1
RFC1-210ENST00000505077 STK26Q9P289 416 aa14.45□□□□□ -0.1
RFC1-210ENST00000505077 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
RFC1-210ENST00000505077 LRRC7Q96NW7 1537 aa14.45□□□□□ -0.1
RFC1-210ENST00000505077 DCCP43146 1447 aa14.44□□□□□ -0.1
RFC1-210ENST00000505077 IQSEC2Q5JU85 1478 aa14.44□□□□□ -0.1
RFC1-210ENST00000505077 ZNF335Q9H4Z2 1342 aaPredicted RBP14.43□□□□□ -0.1
RFC1-210ENST00000505077 TOPAZ1Q8N9V7 1692 aa14.43□□□□□ -0.1
RFC1-210ENST00000505077 RGPD8O14715 1765 aaPredicted RBP14.43□□□□□ -0.1
RFC1-210ENST00000505077 TULP4Q9NRJ4 1543 aa14.42□□□□□ -0.1
RFC1-210ENST00000505077 PRAM1Q96QH2 718 aa14.42□□□□□ -0.1
RFC1-210ENST00000505077 POGKQ9P215 609 aa14.42□□□□□ -0.1
RFC1-210ENST00000505077 MYOM1P52179 1685 aa14.4□□□□□ -0.1
RFC1-210ENST00000505077 TMEM94Q12767 1356 aa14.4□□□□□ -0.1
RFC1-210ENST00000505077 PLEKHH1Q9ULM0 1364 aa14.4□□□□□ -0.1
RFC1-210ENST00000505077 ST20-MTHFSA0A0A6YYL1 179 aa14.4□□□□□ -0.1
RFC1-210ENST00000505077 HSPA5P11021 654 aaKnown RBP14.39□□□□□ -0.11
RFC1-210ENST00000505077 USP32Q8NFA0 1604 aa14.39□□□□□ -0.11
RFC1-210ENST00000505077 KIF1AQ12756 1690 aa14.39□□□□□ -0.11
RFC1-210ENST00000505077 PROSER2Q86WR7 435 aaPredicted RBP14.38□□□□□ -0.11
RFC1-210ENST00000505077 TESK2Q96S53 571 aa14.38□□□□□ -0.11
RFC1-210ENST00000505077 MSH6P52701 1360 aa14.37□□□□□ -0.11
RFC1-210ENST00000505077 WAPLQ7Z5K2 1190 aa14.37□□□□□ -0.11
RFC1-210ENST00000505077 CNKSR2Q8WXI2 1034 aa14.37□□□□□ -0.11
RFC1-210ENST00000505077 ANKARQ7Z5J8 1434 aa14.37□□□□□ -0.11
RFC1-210ENST00000505077 AKAP12Q02952 1782 aa14.37□□□□□ -0.11
RFC1-210ENST00000505077 CDCA8Q53HL2 280 aa14.36□□□□□ -0.11
RFC1-210ENST00000505077 EVC2Q86UK5 1308 aa14.36□□□□□ -0.11
RFC1-210ENST00000505077 TMF1P82094 1093 aa14.35□□□□□ -0.11
RFC1-210ENST00000505077 PUS7Q96PZ0 661 aaKnown RBP14.35□□□□□ -0.11
RFC1-210ENST00000505077 ATP7BP35670 1465 aa14.34□□□□□ -0.11
RFC1-210ENST00000505077 C19orf44Q9H6X5 657 aa14.34□□□□□ -0.11
RFC1-210ENST00000505077 MINK1Q8N4C8 1332 aaPredicted RBP14.34□□□□□ -0.11
RFC1-210ENST00000505077 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
RFC1-210ENST00000505077 NINLQ9Y2I6 1382 aa14.34□□□□□ -0.11
RFC1-210ENST00000505077 MON2Q7Z3U7 1717 aa14.33□□□□□ -0.12
RFC1-210ENST00000505077 SAFB2Q14151 953 aaKnown RBP eCLIP14.33□□□□□ -0.12
RFC1-210ENST00000505077 C14orf37Q86TY3 774 aa14.33□□□□□ -0.12
RFC1-210ENST00000505077 ATAD2Q6PL18 1390 aa14.33□□□□□ -0.12
RFC1-210ENST00000505077 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
RFC1-210ENST00000505077 CADPS2Q86UW7 1296 aa14.3□□□□□ -0.12
RFC1-210ENST00000505077 MST1RQ04912 1400 aa14.3□□□□□ -0.12
RFC1-210ENST00000505077 NHSL1Q5SYE7 1610 aa14.3□□□□□ -0.12
RFC1-210ENST00000505077 ATF3P18847 181 aa14.29□□□□□ -0.12
RFC1-210ENST00000505077 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
RFC1-210ENST00000505077 SRPK2P78362 688 aaKnown RBP14.28□□□□□ -0.12
RFC1-210ENST00000505077 CCDC7Q96M83 1385 aa14.28□□□□□ -0.12
RFC1-210ENST00000505077 CDK19Q9BWU1 502 aa14.28□□□□□ -0.12
RFC1-210ENST00000505077 KIF20BQ96Q89 1820 aa14.27□□□□□ -0.12
RFC1-210ENST00000505077 ROBO1Q9Y6N7 1651 aa14.27□□□□□ -0.12
RFC1-210ENST00000505077 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
RFC1-210ENST00000505077 KIF7Q2M1P5 1343 aa14.26□□□□□ -0.13
RFC1-210ENST00000505077 ZNF316A6NFI3 1004 aaPredicted RBP14.26□□□□□ -0.13
RFC1-210ENST00000505077 C1orf167Q5SNV9 1468 aa14.25□□□□□ -0.13
RFC1-210ENST00000505077 PPIP5K1Q6PFW1 1433 aa14.25□□□□□ -0.13
RFC1-210ENST00000505077 ANKRD26Q9UPS8 1709 aa14.25□□□□□ -0.13
RFC1-210ENST00000505077 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
RFC1-210ENST00000505077 WASHC2AQ641Q2 1341 aa14.24□□□□□ -0.13
RFC1-210ENST00000505077 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
RFC1-210ENST00000505077 CCDC61Q9Y6R9 512 aa14.24□□□□□ -0.13
RFC1-210ENST00000505077 PRR36Q9H6K5 1346 aa14.23□□□□□ -0.13
RFC1-210ENST00000505077 CERKQ8TCT0 537 aa14.23□□□□□ -0.13
RFC1-210ENST00000505077 NUDT16Q96DE0 195 aaKnown RBP14.23□□□□□ -0.13
RFC1-210ENST00000505077 CABP2Q9NPB3 220 aa14.23□□□□□ -0.13
RFC1-210ENST00000505077 RTN4Q9NQC3 1192 aaKnown RBP14.23□□□□□ -0.13
RFC1-210ENST00000505077 TRPM3Q9HCF6 1732 aaPredicted RBP14.23□□□□□ -0.13
RFC1-210ENST00000505077 USP54Q70EL1 1684 aa14.23□□□□□ -0.13
RFC1-210ENST00000505077 AHDC1Q5TGY3 1603 aaPredicted RBP14.23□□□□□ -0.13
RFC1-210ENST00000505077 FOXD4L1Q9NU39 408 aa14.22□□□□□ -0.13
RFC1-210ENST00000505077 POLR3AO14802 1390 aaPredicted RBP14.22□□□□□ -0.13
RFC1-210ENST00000505077 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
RFC1-210ENST00000505077 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
RFC1-210ENST00000505077 BRD4O60885 1362 aaPredicted RBP14.21□□□□□ -0.14
RFC1-210ENST00000505077 ANKRD36BQ8N2N9 1353 aa14.21□□□□□ -0.14
RFC1-210ENST00000505077 CD163L1Q9NR16 1453 aa14.2□□□□□ -0.14
RFC1-210ENST00000505077 CPSF1Q10570 1443 aaKnown RBP14.2□□□□□ -0.14
RFC1-210ENST00000505077 PHLPP1O60346 1717 aa14.2□□□□□ -0.14
RFC1-210ENST00000505077 ALS2Q96Q42 1657 aa14.2□□□□□ -0.14
RFC1-210ENST00000505077 PLEKHG3A1L390 1219 aa14.19□□□□□ -0.14
RFC1-210ENST00000505077 TOM1O60784 492 aa14.19□□□□□ -0.14
RFC1-210ENST00000505077 TERF2IPQ9NYB0 399 aa14.19□□□□□ -0.14
RFC1-210ENST00000505077 SLAIN2Q9P270 581 aa14.19□□□□□ -0.14
RFC1-210ENST00000505077 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
RFC1-210ENST00000505077 PHF8Q9UPP1 1060 aa14.17□□□□□ -0.14
RFC1-210ENST00000505077 A0A1W2PP64 1363 aa14.17□□□□□ -0.14
RFC1-210ENST00000505077 PIK3C2AO00443 1686 aa14.17□□□□□ -0.14
RFC1-210ENST00000505077 USP6P35125 1406 aa14.16□□□□□ -0.14
RFC1-210ENST00000505077 EDC4Q6P2E9 1401 aaKnown RBP14.16□□□□□ -0.14
RFC1-210ENST00000505077 NUTM2FA1L443 756 aa14.16□□□□□ -0.14
RFC1-210ENST00000505077 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
RFC1-210ENST00000505077 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
RFC1-210ENST00000505077 POLR3GLQ9BT43 218 aa14.16□□□□□ -0.14
RFC1-210ENST00000505077 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
RFC1-210ENST00000505077 CABP1Q9NZU7 370 aa14.16□□□□□ -0.14
RFC1-210ENST00000505077 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
RFC1-210ENST00000505077 COL16A1Q07092 1604 aaPredicted RBP14.15□□□□□ -0.14
RFC1-210ENST00000505077 MARF1Q9Y4F3 1742 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms