RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
ATP2C1-208ENST00000504948 EFCAB6Q5THR3 1501 aa9.85□□□□□ -0.83
ATP2C1-208ENST00000504948 CHMP3Q9Y3E7 222 aa9.85□□□□□ -0.83
ATP2C1-208ENST00000504948 ZNF771Q7L3S4 317 aaPredicted RBP9.85□□□□□ -0.83
ATP2C1-208ENST00000504948 ZBTB9Q96C00 473 aa9.85□□□□□ -0.83
ATP2C1-208ENST00000504948 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.85□□□□□ -0.83
ATP2C1-208ENST00000504948 FAM69CQ0P6D2 419 aa9.84□□□□□ -0.83
ATP2C1-208ENST00000504948 TRAPPC8Q9Y2L5 1435 aa9.84□□□□□ -0.83
ATP2C1-208ENST00000504948 ESPNB1AK53 854 aa9.84□□□□□ -0.83
ATP2C1-208ENST00000504948 FAM177BA6PVY3 158 aa9.84□□□□□ -0.83
ATP2C1-208ENST00000504948 SAFB2Q14151 953 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATP2C1-208ENST00000504948 ITPRIPQ8IWB1 547 aa9.84□□□□□ -0.83
ATP2C1-208ENST00000504948 DRC7Q8IY82 874 aa9.84□□□□□ -0.83
ATP2C1-208ENST00000504948 MPHOSPH9Q99550 1183 aa9.84□□□□□ -0.83
ATP2C1-208ENST00000504948 MYO5BQ9ULV0 1848 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 E9PSI1 815 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 ELL2O00472 640 aaPredicted RBP9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 CHMP4AQ9BY43 222 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 MED14O60244 1454 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 KIF7Q2M1P5 1343 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 NPHP1O15259 732 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 E9PCH4 1651 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 TNNT3P45378 269 aaPredicted RBP9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 AEBP1Q8IUX7 1158 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 ABCC3O15438 1527 aa9.83□□□□□ -0.84
ATP2C1-208ENST00000504948 CALD1Q05682 793 aaKnown RBP9.82□□□□□ -0.84
ATP2C1-208ENST00000504948 CEP170BQ9Y4F5 1589 aaPredicted RBP9.82□□□□□ -0.84
ATP2C1-208ENST00000504948 XPCQ01831 940 aaPredicted RBP9.82□□□□□ -0.84
ATP2C1-208ENST00000504948 ARHGAP31Q2M1Z3 1444 aa9.82□□□□□ -0.84
ATP2C1-208ENST00000504948 VGLL3A8MV65 326 aa9.82□□□□□ -0.84
ATP2C1-208ENST00000504948 CBX1P83916 185 aa9.82□□□□□ -0.84
ATP2C1-208ENST00000504948 GBP4Q96PP9 640 aa9.82□□□□□ -0.84
ATP2C1-208ENST00000504948 SLIT1O75093 1534 aa9.82□□□□□ -0.84
ATP2C1-208ENST00000504948 APAF1O14727 1248 aa9.81□□□□□ -0.84
ATP2C1-208ENST00000504948 DUOX2Q9NRD8 1548 aa9.81□□□□□ -0.84
ATP2C1-208ENST00000504948 BCAR3O75815 825 aa9.81□□□□□ -0.84
ATP2C1-208ENST00000504948 ZNF592Q92610 1267 aa9.81□□□□□ -0.84
ATP2C1-208ENST00000504948 CCDC141Q6ZP82 1450 aa9.81□□□□□ -0.84
ATP2C1-208ENST00000504948 PRAG1Q86YV5 1406 aa9.81□□□□□ -0.84
ATP2C1-208ENST00000504948 PKD2Q13563 968 aa9.8□□□□□ -0.84
ATP2C1-208ENST00000504948 NRXN3Q9Y4C0 1643 aa9.8□□□□□ -0.84
ATP2C1-208ENST00000504948 SPHKAPQ2M3C7 1700 aa9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 RRP9O43818 475 aaKnown RBP9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 CAVIN1Q6NZI2 390 aaKnown RBP9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 CENPQQ7L2Z9 268 aaPredicted RBP9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 PZPP20742 1482 aa9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 NASPP49321 788 aaPredicted RBP9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 GOLGA2Q08379 1002 aa9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 PLPPR3Q6T4P5 718 aa9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 ARHGAP23Q9P227 1491 aa9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 MCTP1Q6DN14 999 aa9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 BBXQ8WY36 941 aaPredicted RBP9.79□□□□□ -0.84
ATP2C1-208ENST00000504948 KIAA2012Q0VF49 1180 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 ERBINQ96RT1 1412 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 CNTLNQ9NXG0 1405 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 MS4A1P11836 297 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 TMEM131LA2VDJ0 1609 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 IQGAP1P46940 1657 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 SOX12O15370 315 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 XRCC6P12956 609 aaKnown RBP eCLIP9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 PDE4CQ08493 712 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 SPDYE4A6NLX3 237 aa9.78□□□□□ -0.84
ATP2C1-208ENST00000504948 CHAF1AQ13111 956 aaPredicted RBP9.77□□□□□ -0.84
ATP2C1-208ENST00000504948 LNPKQ9C0E8 428 aa9.77□□□□□ -0.84
ATP2C1-208ENST00000504948 GRPEL1Q9HAV7 217 aa9.77□□□□□ -0.84
ATP2C1-208ENST00000504948 PTPRKQ15262 1439 aa9.77□□□□□ -0.84
ATP2C1-208ENST00000504948 CHD2O14647 1828 aaKnown RBP9.77□□□□□ -0.84
ATP2C1-208ENST00000504948 PTMSP20962 102 aa9.77□□□□□ -0.85
ATP2C1-208ENST00000504948 UQCRHLA0A096LP55 91 aa9.77□□□□□ -0.85
ATP2C1-208ENST00000504948 UQCRHP07919 91 aa9.77□□□□□ -0.85
ATP2C1-208ENST00000504948 SKIDA1Q1XH10 827 aa9.77□□□□□ -0.85
ATP2C1-208ENST00000504948 KNDC1Q76NI1 1749 aa9.77□□□□□ -0.85
ATP2C1-208ENST00000504948 NBPF8Q3BBV2 869 aa9.76□□□□□ -0.85
ATP2C1-208ENST00000504948 NLRP13Q86W25 1043 aa9.76□□□□□ -0.85
ATP2C1-208ENST00000504948 PANK3Q9H999 370 aa9.76□□□□□ -0.85
ATP2C1-208ENST00000504948 TSC1Q92574 1164 aa9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 ERICH4A6NGS2 130 aa9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 FBXW7Q969H0 707 aa9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 MYOM3Q5VTT5 1437 aa9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 SCAPERQ9BY12 1400 aa9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 A2MP01023 1474 aa9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 MRE11P49959 708 aa9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 CGNQ9P2M7 1197 aaKnown RBP9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 NAP1L2Q9ULW6 460 aaPredicted RBP9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 ADAMTS8Q9UP79 889 aa9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 XRN1Q8IZH2 1706 aaKnown RBP9.75□□□□□ -0.85
ATP2C1-208ENST00000504948 PTPRTO14522 1441 aa9.74□□□□□ -0.85
ATP2C1-208ENST00000504948 MCM4P33991 863 aa9.74□□□□□ -0.85
ATP2C1-208ENST00000504948 CHMP5Q9NZZ3 219 aa9.74□□□□□ -0.85
ATP2C1-208ENST00000504948 KTN1Q86UP2 1357 aaKnown RBP9.74□□□□□ -0.85
ATP2C1-208ENST00000504948 CCDC7Q96M83 1385 aa9.74□□□□□ -0.85
ATP2C1-208ENST00000504948 SEC24BO95487 1268 aa9.74□□□□□ -0.85
ATP2C1-208ENST00000504948 C22orf23Q9BZE7 217 aa9.74□□□□□ -0.85
ATP2C1-208ENST00000504948 PPLO60437 1756 aa9.73□□□□□ -0.85
ATP2C1-208ENST00000504948 CHMP4BQ9H444 224 aaKnown RBP9.73□□□□□ -0.85
ATP2C1-208ENST00000504948 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
ATP2C1-208ENST00000504948 TSPY4P0CV99 314 aa9.73□□□□□ -0.85
ATP2C1-208ENST00000504948 TSPY10P0CW01 314 aa9.73□□□□□ -0.85
ATP2C1-208ENST00000504948 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
ATP2C1-208ENST00000504948 AEBP2Q6ZN18 517 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms