RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 LRPPRCP42704 1394 aaKnown RBP13.95□□□□□ -0.18
DDX41-203ENST00000504781 KCNA6P17658 529 aa13.94□□□□□ -0.18
DDX41-203ENST00000504781 STK26Q9P289 416 aa13.94□□□□□ -0.18
DDX41-203ENST00000504781 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
DDX41-203ENST00000504781 POGKQ9P215 609 aa13.93□□□□□ -0.18
DDX41-203ENST00000504781 PER1O15534 1290 aaPredicted RBP13.92□□□□□ -0.18
DDX41-203ENST00000504781 TMEM94Q12767 1356 aa13.91□□□□□ -0.18
DDX41-203ENST00000504781 DLC1Q96QB1 1528 aa13.9□□□□□ -0.18
DDX41-203ENST00000504781 PRAM1Q96QH2 718 aa13.9□□□□□ -0.18
DDX41-203ENST00000504781 PRKRIP1Q9H875 184 aaPredicted RBP13.9□□□□□ -0.18
DDX41-203ENST00000504781 PANK3Q9H999 370 aa13.9□□□□□ -0.18
DDX41-203ENST00000504781 METP08581 1390 aa13.9□□□□□ -0.18
DDX41-203ENST00000504781 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.19
DDX41-203ENST00000504781 KTN1Q86UP2 1357 aaKnown RBP13.89□□□□□ -0.19
DDX41-203ENST00000504781 FAM135BQ49AJ0 1406 aa13.89□□□□□ -0.19
DDX41-203ENST00000504781 PIK3R4Q99570 1358 aa13.88□□□□□ -0.19
DDX41-203ENST00000504781 NRXN3Q9Y4C0 1643 aa13.88□□□□□ -0.19
DDX41-203ENST00000504781 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
DDX41-203ENST00000504781 SETD1AO15047 1707 aaKnown RBP13.87□□□□□ -0.19
DDX41-203ENST00000504781 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
DDX41-203ENST00000504781 ASXL1Q8IXJ9 1541 aa13.87□□□□□ -0.19
DDX41-203ENST00000504781 RALBP1Q15311 655 aa13.87□□□□□ -0.19
DDX41-203ENST00000504781 TECPR2O15040 1411 aa13.87□□□□□ -0.19
DDX41-203ENST00000504781 C14orf37Q86TY3 774 aa13.86□□□□□ -0.19
DDX41-203ENST00000504781 XIRP1Q702N8 1843 aaKnown RBP13.85□□□□□ -0.19
DDX41-203ENST00000504781 QRICH2Q9H0J4 1663 aa13.85□□□□□ -0.19
DDX41-203ENST00000504781 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
DDX41-203ENST00000504781 AMOTL2Q9Y2J4 779 aa13.85□□□□□ -0.19
DDX41-203ENST00000504781 KNSTRNQ9Y448 316 aa13.85□□□□□ -0.19
DDX41-203ENST00000504781 DIP2AQ14689 1571 aa13.84□□□□□ -0.19
DDX41-203ENST00000504781 CDK19Q9BWU1 502 aa13.84□□□□□ -0.19
DDX41-203ENST00000504781 MSH6P52701 1360 aa13.83□□□□□ -0.19
DDX41-203ENST00000504781 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.19
DDX41-203ENST00000504781 SAFB2Q14151 953 aaKnown RBP eCLIP13.83□□□□□ -0.2
DDX41-203ENST00000504781 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
DDX41-203ENST00000504781 MINK1Q8N4C8 1332 aaPredicted RBP13.82□□□□□ -0.2
DDX41-203ENST00000504781 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
DDX41-203ENST00000504781 NPC1L1Q9UHC9 1359 aa13.82□□□□□ -0.2
DDX41-203ENST00000504781 NKTRP30414 1462 aaKnown RBP13.81□□□□□ -0.2
DDX41-203ENST00000504781 WASLO00401 505 aaPredicted RBP13.81□□□□□ -0.2
DDX41-203ENST00000504781 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
DDX41-203ENST00000504781 SLAIN2Q9P270 581 aa13.81□□□□□ -0.2
DDX41-203ENST00000504781 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
DDX41-203ENST00000504781 TMC1Q8TDI8 760 aa13.8□□□□□ -0.2
DDX41-203ENST00000504781 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
DDX41-203ENST00000504781 PTPRUQ92729 1446 aa13.79□□□□□ -0.2
DDX41-203ENST00000504781 NWD1Q149M9 1564 aa13.79□□□□□ -0.2
DDX41-203ENST00000504781 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
DDX41-203ENST00000504781 POTEDQ86YR6 584 aa13.78□□□□□ -0.2
DDX41-203ENST00000504781 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
DDX41-203ENST00000504781 TERF2IPQ9NYB0 399 aa13.78□□□□□ -0.2
DDX41-203ENST00000504781 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
DDX41-203ENST00000504781 ATF3P18847 181 aa13.77□□□□□ -0.21
DDX41-203ENST00000504781 ROBO2Q9HCK4 1378 aa13.77□□□□□ -0.21
DDX41-203ENST00000504781 PLEKHH1Q9ULM0 1364 aa13.77□□□□□ -0.21
DDX41-203ENST00000504781 ROBO1Q9Y6N7 1651 aa13.77□□□□□ -0.21
DDX41-203ENST00000504781 CCDC61Q9Y6R9 512 aa13.77□□□□□ -0.21
DDX41-203ENST00000504781 TULP4Q9NRJ4 1543 aa13.76□□□□□ -0.21
DDX41-203ENST00000504781 MYBBP1AQ9BQG0 1328 aaKnown RBP13.76□□□□□ -0.21
DDX41-203ENST00000504781 ZNF692Q9BU19 519 aaPredicted RBP13.76□□□□□ -0.21
DDX41-203ENST00000504781 PTCH1Q13635 1447 aa13.75□□□□□ -0.21
DDX41-203ENST00000504781 ANKRD36BQ8N2N9 1353 aa13.75□□□□□ -0.21
DDX41-203ENST00000504781 PARD3Q8TEW0 1356 aa13.75□□□□□ -0.21
DDX41-203ENST00000504781 HDGFL2Q7Z4V5 671 aaPredicted RBP13.75□□□□□ -0.21
DDX41-203ENST00000504781 C19orf44Q9H6X5 657 aa13.75□□□□□ -0.21
DDX41-203ENST00000504781 CC2D1BQ5T0F9 858 aaKnown RBP13.74□□□□□ -0.21
DDX41-203ENST00000504781 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
DDX41-203ENST00000504781 NUDT16Q96DE0 195 aaKnown RBP13.74□□□□□ -0.21
DDX41-203ENST00000504781 CABP1Q9NZU7 370 aa13.74□□□□□ -0.21
DDX41-203ENST00000504781 MYOM1P52179 1685 aa13.73□□□□□ -0.21
DDX41-203ENST00000504781 NLRP13Q86W25 1043 aa13.73□□□□□ -0.21
DDX41-203ENST00000504781 MRS2Q9HD23 443 aa13.73□□□□□ -0.21
DDX41-203ENST00000504781 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
DDX41-203ENST00000504781 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
DDX41-203ENST00000504781 CENPBP07199 599 aaPredicted RBP13.72□□□□□ -0.21
DDX41-203ENST00000504781 RGS17Q9UGC6 210 aaPredicted RBP13.72□□□□□ -0.21
DDX41-203ENST00000504781 NCOA3Q9Y6Q9 1424 aa13.72□□□□□ -0.21
DDX41-203ENST00000504781 PLEKHG3A1L390 1219 aa13.71□□□□□ -0.21
DDX41-203ENST00000504781 PHLPP1O60346 1717 aa13.7□□□□□ -0.22
DDX41-203ENST00000504781 XRN1Q8IZH2 1706 aaKnown RBP13.7□□□□□ -0.22
DDX41-203ENST00000504781 NSD2O96028 1365 aa13.7□□□□□ -0.22
DDX41-203ENST00000504781 CNGB1Q14028 1251 aaPredicted RBP13.69□□□□□ -0.22
DDX41-203ENST00000504781 CCDC184Q52MB2 194 aa13.69□□□□□ -0.22
DDX41-203ENST00000504781 ADGRB2O60241 1585 aa13.69□□□□□ -0.22
DDX41-203ENST00000504781 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.69□□□□□ -0.22
DDX41-203ENST00000504781 JCADQ9P266 1359 aa13.69□□□□□ -0.22
DDX41-203ENST00000504781 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
DDX41-203ENST00000504781 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
DDX41-203ENST00000504781 PPP2R1AP30153 589 aa13.67□□□□□ -0.22
DDX41-203ENST00000504781 POTEAQ6S8J7 498 aa13.67□□□□□ -0.22
DDX41-203ENST00000504781 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
DDX41-203ENST00000504781 ATP7BP35670 1465 aa13.67□□□□□ -0.22
DDX41-203ENST00000504781 CPSF1Q10570 1443 aaKnown RBP13.66□□□□□ -0.22
DDX41-203ENST00000504781 NSD3Q9BZ95 1437 aa13.66□□□□□ -0.22
DDX41-203ENST00000504781 FYB1O15117 783 aa13.66□□□□□ -0.22
DDX41-203ENST00000504781 BRINP3Q76B58 766 aa13.66□□□□□ -0.22
DDX41-203ENST00000504781 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
DDX41-203ENST00000504781 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
DDX41-203ENST00000504781 PPIP5K1Q6PFW1 1433 aa13.65□□□□□ -0.22
DDX41-203ENST00000504781 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms