RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC13-206ENST00000504751 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC13-206ENST00000504751 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC13-206ENST00000504751 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC13-206ENST00000504751 SPDYE5A6NIY4 337 aa11.25□□□□□ -0.61
TRAPPC13-206ENST00000504751 PCDHB3Q9Y5E6 796 aa11.25□□□□□ -0.61
TRAPPC13-206ENST00000504751 CFAP99D6REC4 459 aa11.24□□□□□ -0.61
TRAPPC13-206ENST00000504751 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
TRAPPC13-206ENST00000504751 SYMPKQ92797 1274 aaKnown RBP11.24□□□□□ -0.61
TRAPPC13-206ENST00000504751 SNRKQ9NRH2 765 aa11.24□□□□□ -0.61
TRAPPC13-206ENST00000504751 Q3C1V9 767 aa11.23□□□□□ -0.61
TRAPPC13-206ENST00000504751 AP1G2O75843 785 aa11.22□□□□□ -0.61
TRAPPC13-206ENST00000504751 BLOC1S3Q6QNY0 202 aa11.22□□□□□ -0.61
TRAPPC13-206ENST00000504751 MTMR14Q8NCE2 650 aa11.22□□□□□ -0.61
TRAPPC13-206ENST00000504751 SOCS7O14512 581 aa11.21□□□□□ -0.61
TRAPPC13-206ENST00000504751 USP17L8P0C7I0 530 aa11.21□□□□□ -0.61
TRAPPC13-206ENST00000504751 RNF19BQ6ZMZ0 732 aa11.21□□□□□ -0.61
TRAPPC13-206ENST00000504751 NYAP1Q6ZVC0 841 aa11.21□□□□□ -0.61
TRAPPC13-206ENST00000504751 ZMYND15Q9H091 742 aa11.21□□□□□ -0.61
TRAPPC13-206ENST00000504751 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
TRAPPC13-206ENST00000504751 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
TRAPPC13-206ENST00000504751 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
TRAPPC13-206ENST00000504751 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
TRAPPC13-206ENST00000504751 NR1I2O75469 434 aa11.19□□□□□ -0.62
TRAPPC13-206ENST00000504751 UBTFP17480 764 aaKnown RBP11.19□□□□□ -0.62
TRAPPC13-206ENST00000504751 BRICD5Q6PL45 260 aa11.19□□□□□ -0.62
TRAPPC13-206ENST00000504751 SCUBE3Q8IX30 993 aa11.19□□□□□ -0.62
TRAPPC13-206ENST00000504751 PRR7Q8TB68 274 aa11.18□□□□□ -0.62
TRAPPC13-206ENST00000504751 CTDSPL2Q05D32 466 aa11.17□□□□□ -0.62
TRAPPC13-206ENST00000504751 HELBQ8NG08 1087 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC13-206ENST00000504751 CLUAP1Q96AJ1 413 aa11.17□□□□□ -0.62
TRAPPC13-206ENST00000504751 PTPN5P54829 565 aa11.16□□□□□ -0.62
TRAPPC13-206ENST00000504751 POM121Q96HA1 1249 aa11.16□□□□□ -0.62
TRAPPC13-206ENST00000504751 A6NJR5 290 aa11.15□□□□□ -0.62
TRAPPC13-206ENST00000504751 COPS2P61201 443 aa11.15□□□□□ -0.62
TRAPPC13-206ENST00000504751 USB1Q9BQ65 265 aaKnown RBP11.15□□□□□ -0.62
TRAPPC13-206ENST00000504751 PCDH10Q9P2E7 1040 aa11.15□□□□□ -0.62
TRAPPC13-206ENST00000504751 FMNL1O95466 1100 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC13-206ENST00000504751 DESI1Q6ICB0 168 aa11.14□□□□□ -0.63
TRAPPC13-206ENST00000504751 TSC1Q92574 1164 aa11.14□□□□□ -0.63
TRAPPC13-206ENST00000504751 HMX1Q9NP08 348 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC13-206ENST00000504751 COG6Q9Y2V7 657 aa11.14□□□□□ -0.63
TRAPPC13-206ENST00000504751 GJD4Q96KN9 370 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC13-206ENST00000504751 MTRQ99707 1265 aa11.13□□□□□ -0.63
TRAPPC13-206ENST00000504751 LRRN4Q8WUT4 740 aa11.12□□□□□ -0.63
TRAPPC13-206ENST00000504751 PER1O15534 1290 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC13-206ENST00000504751 TJAP1Q5JTD0 557 aa11.11□□□□□ -0.63
TRAPPC13-206ENST00000504751 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
TRAPPC13-206ENST00000504751 APBB1O00213 710 aa11.1□□□□□ -0.63
TRAPPC13-206ENST00000504751 TLL1O43897 1013 aa11.1□□□□□ -0.63
TRAPPC13-206ENST00000504751 MSS51Q4VC12 460 aa11.1□□□□□ -0.63
TRAPPC13-206ENST00000504751 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
TRAPPC13-206ENST00000504751 SUPT5HO00267 1087 aaKnown RBP11.09□□□□□ -0.63
TRAPPC13-206ENST00000504751 RAD21O60216 631 aa11.09□□□□□ -0.63
TRAPPC13-206ENST00000504751 ZPR1O75312 459 aa11.09□□□□□ -0.63
TRAPPC13-206ENST00000504751 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC13-206ENST00000504751 FAM160A2Q8N612 972 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC13-206ENST00000504751 SPSB2Q99619 263 aa11.09□□□□□ -0.63
TRAPPC13-206ENST00000504751 GPR37L1O60883 481 aa11.08□□□□□ -0.64
TRAPPC13-206ENST00000504751 JUNDP17535 347 aa11.08□□□□□ -0.64
TRAPPC13-206ENST00000504751 LYPD8Q6UX82 237 aa11.08□□□□□ -0.64
TRAPPC13-206ENST00000504751 FNBP4Q8N3X1 1017 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC13-206ENST00000504751 RNF166Q96A37 237 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC13-206ENST00000504751 GDPD2Q9HCC8 539 aa11.08□□□□□ -0.64
TRAPPC13-206ENST00000504751 TBC1D2BQ9UPU7 963 aa11.08□□□□□ -0.64
TRAPPC13-206ENST00000504751 IL21Q9HBE4 155 aa11.07□□□□□ -0.64
TRAPPC13-206ENST00000504751 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
TRAPPC13-206ENST00000504751 TRAK2O60296 914 aa11.06□□□□□ -0.64
TRAPPC13-206ENST00000504751 DXOO77932 396 aaKnown RBP11.06□□□□□ -0.64
TRAPPC13-206ENST00000504751 ADH1BP00325 375 aa11.06□□□□□ -0.64
TRAPPC13-206ENST00000504751 ZNF516Q92618 1163 aa11.06□□□□□ -0.64
TRAPPC13-206ENST00000504751 EPS8L1Q8TE68 723 aa11.05□□□□□ -0.64
TRAPPC13-206ENST00000504751 NDUFB9Q9Y6M9 179 aa11.05□□□□□ -0.64
TRAPPC13-206ENST00000504751 MMP16P51512 607 aa11.04□□□□□ -0.64
TRAPPC13-206ENST00000504751 PTPRNQ16849 979 aa11.04□□□□□ -0.64
TRAPPC13-206ENST00000504751 HCSTQ9UBK5 93 aa11.04□□□□□ -0.64
TRAPPC13-206ENST00000504751 F12P00748 615 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC13-206ENST00000504751 NR6A1Q15406 480 aa11.02□□□□□ -0.65
TRAPPC13-206ENST00000504751 C1orf115Q9H7X2 142 aa11.02□□□□□ -0.65
TRAPPC13-206ENST00000504751 PRM3Q9NNZ6 103 aa11.02□□□□□ -0.65
TRAPPC13-206ENST00000504751 ABL2P42684 1182 aa11.01□□□□□ -0.65
TRAPPC13-206ENST00000504751 IRF5Q13568 498 aa11□□□□□ -0.65
TRAPPC13-206ENST00000504751 ITGBL1O95965 494 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC13-206ENST00000504751 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
TRAPPC13-206ENST00000504751 MAP10Q9P2G4 905 aa10.99□□□□□ -0.65
TRAPPC13-206ENST00000504751 ARID3CA6NKF2 412 aa10.98□□□□□ -0.65
TRAPPC13-206ENST00000504751 CCNYL3P0C7X3 344 aa10.98□□□□□ -0.65
TRAPPC13-206ENST00000504751 NUDT12Q9BQG2 462 aa10.97□□□□□ -0.65
TRAPPC13-206ENST00000504751 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
TRAPPC13-206ENST00000504751 S1PR4O95977 384 aa10.95□□□□□ -0.66
TRAPPC13-206ENST00000504751 EVA1BQ9NVM1 165 aa10.95□□□□□ -0.66
TRAPPC13-206ENST00000504751 ZNF330Q9Y3S2 320 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC13-206ENST00000504751 MMRN1Q13201 1228 aa10.94□□□□□ -0.66
TRAPPC13-206ENST00000504751 KCNC4Q03721 635 aa10.93□□□□□ -0.66
TRAPPC13-206ENST00000504751 WWC1Q8IX03 1113 aa10.93□□□□□ -0.66
TRAPPC13-206ENST00000504751 ZNF777Q9ULD5 760 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC13-206ENST00000504751 CTHP32929 405 aa10.92□□□□□ -0.66
TRAPPC13-206ENST00000504751 KCNH2Q12809 1159 aa10.92□□□□□ -0.66
TRAPPC13-206ENST00000504751 FKBPLQ9UIM3 349 aa10.92□□□□□ -0.66
TRAPPC13-206ENST00000504751 POM121CA8CG34 1229 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms