RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 STK26Q9P289 416 aa18.14■□□□□ 0.49
NEDD9-209ENST00000504634 PRAG1Q86YV5 1406 aa18.14■□□□□ 0.49
NEDD9-209ENST00000504634 RGL3Q3MIN7 710 aa18.13■□□□□ 0.49
NEDD9-209ENST00000504634 FNBP4Q8N3X1 1017 aaPredicted RBP18.13■□□□□ 0.49
NEDD9-209ENST00000504634 ATAD2Q6PL18 1390 aa18.13■□□□□ 0.49
NEDD9-209ENST00000504634 NUTM2FA1L443 756 aa18.11■□□□□ 0.49
NEDD9-209ENST00000504634 FOXO3O43524 673 aa18.11■□□□□ 0.49
NEDD9-209ENST00000504634 XPCQ01831 940 aaPredicted RBP18.11■□□□□ 0.49
NEDD9-209ENST00000504634 ADGRF5Q8IZF2 1346 aa18.11■□□□□ 0.49
NEDD9-209ENST00000504634 CCDC144AA2RUR9 1427 aa18.1■□□□□ 0.49
NEDD9-209ENST00000504634 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
NEDD9-209ENST00000504634 WAPLQ7Z5K2 1190 aa18.1■□□□□ 0.49
NEDD9-209ENST00000504634 LAMC1P11047 1609 aa18.09■□□□□ 0.49
NEDD9-209ENST00000504634 TMEM132EQ6IEE7 984 aa18.07■□□□□ 0.48
NEDD9-209ENST00000504634 ATRNO75882 1429 aa18.06■□□□□ 0.48
NEDD9-209ENST00000504634 ANKRD30BQ9BXX2 1392 aa18.06■□□□□ 0.48
NEDD9-209ENST00000504634 CDC42BPGQ6DT37 1551 aa18.06■□□□□ 0.48
NEDD9-209ENST00000504634 MYOM2P54296 1465 aa18.06■□□□□ 0.48
NEDD9-209ENST00000504634 MPHOSPH9Q99550 1183 aa18.05■□□□□ 0.48
NEDD9-209ENST00000504634 PXDNQ92626 1479 aa18.04■□□□□ 0.48
NEDD9-209ENST00000504634 PPLO60437 1756 aa18.04■□□□□ 0.48
NEDD9-209ENST00000504634 ABCC11Q96J66 1382 aa18.04■□□□□ 0.48
NEDD9-209ENST00000504634 TECPR2O15040 1411 aa18.03■□□□□ 0.48
NEDD9-209ENST00000504634 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
NEDD9-209ENST00000504634 COL22A1Q8NFW1 1626 aaPredicted RBP18.02■□□□□ 0.48
NEDD9-209ENST00000504634 SPATA31E1Q6ZUB1 1445 aa18.02■□□□□ 0.48
NEDD9-209ENST00000504634 GJD4Q96KN9 370 aaPredicted RBP18.02■□□□□ 0.48
NEDD9-209ENST00000504634 ZRANB1Q9UGI0 708 aa18.02■□□□□ 0.48
NEDD9-209ENST00000504634 BCL9LQ86UU0 1499 aa18.01■□□□□ 0.47
NEDD9-209ENST00000504634 HAP1P54257 671 aaPredicted RBP18.01■□□□□ 0.47
NEDD9-209ENST00000504634 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
NEDD9-209ENST00000504634 CCDC125Q86Z20 511 aa18■□□□□ 0.47
NEDD9-209ENST00000504634 UNC5CLQ8IV45 518 aa18■□□□□ 0.47
NEDD9-209ENST00000504634 SPATA31A3Q5VYP0 1347 aa17.99■□□□□ 0.47
NEDD9-209ENST00000504634 PIK3C2GO75747 1445 aa17.98■□□□□ 0.47
NEDD9-209ENST00000504634 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
NEDD9-209ENST00000504634 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
NEDD9-209ENST00000504634 PSME1Q06323 249 aa17.97■□□□□ 0.47
NEDD9-209ENST00000504634 LMOD2Q6P5Q4 547 aa17.96■□□□□ 0.47
NEDD9-209ENST00000504634 SIRT1Q96EB6 747 aa17.96■□□□□ 0.47
NEDD9-209ENST00000504634 C14orf93Q9H972 538 aaKnown RBP17.96■□□□□ 0.47
NEDD9-209ENST00000504634 PHF8Q9UPP1 1060 aa17.96■□□□□ 0.47
NEDD9-209ENST00000504634 DHX57Q6P158 1386 aaKnown RBP17.94■□□□□ 0.46
NEDD9-209ENST00000504634 SAFB2Q14151 953 aaKnown RBP eCLIP17.94■□□□□ 0.46
NEDD9-209ENST00000504634 CFAP70Q5T0N1 1121 aa17.94■□□□□ 0.46
NEDD9-209ENST00000504634 CABLES1Q8TDN4 633 aa17.93■□□□□ 0.46
NEDD9-209ENST00000504634 PRAM1Q96QH2 718 aa17.93■□□□□ 0.46
NEDD9-209ENST00000504634 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
NEDD9-209ENST00000504634 RALGAPBQ86X10 1494 aa17.93■□□□□ 0.46
NEDD9-209ENST00000504634 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
NEDD9-209ENST00000504634 POGKQ9P215 609 aa17.92■□□□□ 0.46
NEDD9-209ENST00000504634 SLIT2O94813 1529 aa17.92■□□□□ 0.46
NEDD9-209ENST00000504634 TNS3Q68CZ2 1445 aa17.91■□□□□ 0.46
NEDD9-209ENST00000504634 SF3B2Q13435 895 aaKnown RBP17.9■□□□□ 0.46
NEDD9-209ENST00000504634 KIF1AQ12756 1690 aa17.9■□□□□ 0.46
NEDD9-209ENST00000504634 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.46
NEDD9-209ENST00000504634 FMN2Q9NZ56 1722 aa17.89■□□□□ 0.46
NEDD9-209ENST00000504634 EP400Q96L91 3159 aa17.89■□□□□ 0.45
NEDD9-209ENST00000504634 VPS72Q15906 364 aa17.89■□□□□ 0.45
NEDD9-209ENST00000504634 SEPT12Q8IYM1 358 aa17.89■□□□□ 0.45
NEDD9-209ENST00000504634 PMFBP1Q8TBY8 1022 aa17.88■□□□□ 0.45
NEDD9-209ENST00000504634 IFT172Q9UG01 1749 aa17.88■□□□□ 0.45
NEDD9-209ENST00000504634 SBNO1A3KN83 1393 aa17.88■□□□□ 0.45
NEDD9-209ENST00000504634 ARHGEF10O15013 1369 aa17.88■□□□□ 0.45
NEDD9-209ENST00000504634 BLMP54132 1417 aaPredicted RBP17.88■□□□□ 0.45
NEDD9-209ENST00000504634 A0A0G2JS52 829 aa17.87■□□□□ 0.45
NEDD9-209ENST00000504634 MYT1Q01538 1121 aa17.87■□□□□ 0.45
NEDD9-209ENST00000504634 MARF1Q9Y4F3 1742 aaKnown RBP17.86■□□□□ 0.45
NEDD9-209ENST00000504634 NRXN1Q9ULB1 1477 aa17.86■□□□□ 0.45
NEDD9-209ENST00000504634 USP32Q8NFA0 1604 aa17.86■□□□□ 0.45
NEDD9-209ENST00000504634 GLI3P10071 1580 aa17.85■□□□□ 0.45
NEDD9-209ENST00000504634 DEFB132Q7Z7B7 95 aa17.85■□□□□ 0.45
NEDD9-209ENST00000504634 HIRIP3Q9BW71 556 aaPredicted RBP17.84■□□□□ 0.45
NEDD9-209ENST00000504634 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.84■□□□□ 0.45
NEDD9-209ENST00000504634 FAM83GA6ND36 823 aa17.83■□□□□ 0.44
NEDD9-209ENST00000504634 KRT27Q7Z3Y8 459 aa17.83■□□□□ 0.44
NEDD9-209ENST00000504634 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
NEDD9-209ENST00000504634 ANKARQ7Z5J8 1434 aa17.82■□□□□ 0.44
NEDD9-209ENST00000504634 GPRASP1Q5JY77 1395 aa17.81■□□□□ 0.44
NEDD9-209ENST00000504634 ONECUT3O60422 494 aaPredicted RBP17.81■□□□□ 0.44
NEDD9-209ENST00000504634 KDM2AQ9Y2K7 1162 aa17.81■□□□□ 0.44
NEDD9-209ENST00000504634 MINK1Q8N4C8 1332 aaPredicted RBP17.8■□□□□ 0.44
NEDD9-209ENST00000504634 BTG4Q9NY30 223 aa17.8■□□□□ 0.44
NEDD9-209ENST00000504634 EIF3AQ14152 1382 aaKnown RBP17.79■□□□□ 0.44
NEDD9-209ENST00000504634 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
NEDD9-209ENST00000504634 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
NEDD9-209ENST00000504634 NGDNQ8NEJ9 315 aaKnown RBP17.79■□□□□ 0.44
NEDD9-209ENST00000504634 PAK3O75914 559 aaPredicted RBP17.78■□□□□ 0.44
NEDD9-209ENST00000504634 DCAF11Q8TEB1 546 aa17.78■□□□□ 0.44
NEDD9-209ENST00000504634 RAB3GAP2Q9H2M9 1393 aa17.78■□□□□ 0.44
NEDD9-209ENST00000504634 BAG6P46379 1132 aa17.77■□□□□ 0.44
NEDD9-209ENST00000504634 WASLO00401 505 aaPredicted RBP17.76■□□□□ 0.43
NEDD9-209ENST00000504634 PRR36Q9H6K5 1346 aa17.75■□□□□ 0.43
NEDD9-209ENST00000504634 RGPD8O14715 1765 aaPredicted RBP17.74■□□□□ 0.43
NEDD9-209ENST00000504634 PRDM11Q9NQV5 511 aa17.74■□□□□ 0.43
NEDD9-209ENST00000504634 NWD2Q9ULI1 1742 aa17.74■□□□□ 0.43
NEDD9-209ENST00000504634 ADGRB1O14514 1584 aa17.74■□□□□ 0.43
NEDD9-209ENST00000504634 PLCH1Q4KWH8 1693 aa17.74■□□□□ 0.43
NEDD9-209ENST00000504634 ADGRB2O60241 1585 aa17.73■□□□□ 0.43
NEDD9-209ENST00000504634 STAC3Q96MF2 364 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms