RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 PRDM9Q9NQV7 894 aa9.94□□□□□ -0.82
HMGCR-204ENST00000504466 TNFRSF10AO00220 468 aa9.93□□□□□ -0.82
HMGCR-204ENST00000504466 MMP16P51512 607 aa9.93□□□□□ -0.82
HMGCR-204ENST00000504466 CD2BP2O95400 341 aaKnown RBP9.92□□□□□ -0.82
HMGCR-204ENST00000504466 GPCPD1Q9NPB8 672 aa9.92□□□□□ -0.82
HMGCR-204ENST00000504466 CLCN1P35523 988 aa9.91□□□□□ -0.82
HMGCR-204ENST00000504466 FAM217BQ9NTX9 383 aaPredicted RBP9.91□□□□□ -0.82
HMGCR-204ENST00000504466 ZNF787Q6DD87 383 aa9.9□□□□□ -0.82
HMGCR-204ENST00000504466 HOXA2O43364 376 aa9.89□□□□□ -0.83
HMGCR-204ENST00000504466 DXOO77932 396 aaKnown RBP9.89□□□□□ -0.83
HMGCR-204ENST00000504466 USB1Q9BQ65 265 aaKnown RBP9.89□□□□□ -0.83
HMGCR-204ENST00000504466 TOR4AQ9NXH8 423 aa9.89□□□□□ -0.83
HMGCR-204ENST00000504466 FAM187AA6NFU0 413 aa9.88□□□□□ -0.83
HMGCR-204ENST00000504466 ZMYND10O75800 440 aa9.86□□□□□ -0.83
HMGCR-204ENST00000504466 FOXC1Q12948 553 aa9.86□□□□□ -0.83
HMGCR-204ENST00000504466 BARGINQ6ZT62 677 aa9.86□□□□□ -0.83
HMGCR-204ENST00000504466 CRIPAKQ8N1N5 446 aa9.86□□□□□ -0.83
HMGCR-204ENST00000504466 HLA-CQ95604 372 aa9.86□□□□□ -0.83
HMGCR-204ENST00000504466 AVPP01185 164 aa9.85□□□□□ -0.83
HMGCR-204ENST00000504466 REPIN1Q9BWE0 567 aaKnown RBP9.85□□□□□ -0.83
HMGCR-204ENST00000504466 ZBTB24O43167 697 aaPredicted RBP9.84□□□□□ -0.83
HMGCR-204ENST00000504466 AAASQ9NRG9 546 aa9.84□□□□□ -0.83
HMGCR-204ENST00000504466 WNT7AO00755 349 aa9.82□□□□□ -0.84
HMGCR-204ENST00000504466 TRIM32Q13049 653 aa9.82□□□□□ -0.84
HMGCR-204ENST00000504466 AMHR2Q16671 573 aa9.82□□□□□ -0.84
HMGCR-204ENST00000504466 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
HMGCR-204ENST00000504466 CYP4X1Q8N118 509 aa9.8□□□□□ -0.84
HMGCR-204ENST00000504466 KRI1Q8N9T8 703 aaKnown RBP9.8□□□□□ -0.84
HMGCR-204ENST00000504466 ZC3H15Q8WU90 426 aaKnown RBP9.8□□□□□ -0.84
HMGCR-204ENST00000504466 ZCCHC6Q5VYS8 1495 aaKnown RBP9.79□□□□□ -0.84
HMGCR-204ENST00000504466 POTECB2RU33 542 aa9.79□□□□□ -0.84
HMGCR-204ENST00000504466 SSTR3P32745 418 aaPredicted RBP9.79□□□□□ -0.84
HMGCR-204ENST00000504466 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
HMGCR-204ENST00000504466 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
HMGCR-204ENST00000504466 ZNF775Q96BV0 537 aaPredicted RBP9.79□□□□□ -0.84
HMGCR-204ENST00000504466 ST8SIA5O15466 376 aa9.78□□□□□ -0.84
HMGCR-204ENST00000504466 JUNDP17535 347 aa9.78□□□□□ -0.84
HMGCR-204ENST00000504466 RETREG3Q86VR2 466 aa9.78□□□□□ -0.84
HMGCR-204ENST00000504466 PCDHGC3Q9UN70 934 aa9.78□□□□□ -0.84
HMGCR-204ENST00000504466 CTC1Q2NKJ3 1217 aa9.77□□□□□ -0.85
HMGCR-204ENST00000504466 SNIP1Q8TAD8 396 aaKnown RBP9.77□□□□□ -0.85
HMGCR-204ENST00000504466 SYMPKQ92797 1274 aaKnown RBP9.77□□□□□ -0.85
HMGCR-204ENST00000504466 SPIRE2Q8WWL2 714 aa9.76□□□□□ -0.85
HMGCR-204ENST00000504466 FDX1P10109 184 aa9.75□□□□□ -0.85
HMGCR-204ENST00000504466 WNT7BP56706 349 aa9.75□□□□□ -0.85
HMGCR-204ENST00000504466 SMPD1P17405 629 aa9.74□□□□□ -0.85
HMGCR-204ENST00000504466 MRGPRX2Q96LB1 330 aa9.74□□□□□ -0.85
HMGCR-204ENST00000504466 TTC24A2A3L6 582 aaPredicted RBP9.73□□□□□ -0.85
HMGCR-204ENST00000504466 SKOR1P84550 965 aa9.73□□□□□ -0.85
HMGCR-204ENST00000504466 GIGYF2Q6Y7W6 1299 aaKnown RBP9.73□□□□□ -0.85
HMGCR-204ENST00000504466 AXIN1O15169 862 aa9.72□□□□□ -0.85
HMGCR-204ENST00000504466 GJA5P36382 358 aa9.72□□□□□ -0.85
HMGCR-204ENST00000504466 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
HMGCR-204ENST00000504466 CCDC24Q8N4L8 307 aa9.72□□□□□ -0.85
HMGCR-204ENST00000504466 DACH1Q9UI36 760 aa9.72□□□□□ -0.85
HMGCR-204ENST00000504466 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
HMGCR-204ENST00000504466 NUDT12Q9BQG2 462 aa9.71□□□□□ -0.86
HMGCR-204ENST00000504466 MOXD2PA6NHM9 499 aa9.7□□□□□ -0.86
HMGCR-204ENST00000504466 PTCRAQ6ISU1 281 aaPredicted RBP9.7□□□□□ -0.86
HMGCR-204ENST00000504466 C6orf229H3BNL8 230 aa9.69□□□□□ -0.86
HMGCR-204ENST00000504466 NDUFV2P19404 249 aa9.69□□□□□ -0.86
HMGCR-204ENST00000504466 DESI1Q6ICB0 168 aa9.69□□□□□ -0.86
HMGCR-204ENST00000504466 SPDYE5A6NIY4 337 aa9.68□□□□□ -0.86
HMGCR-204ENST00000504466 J3QL48 77 aa9.68□□□□□ -0.86
HMGCR-204ENST00000504466 TRIM66O15016 1216 aa9.68□□□□□ -0.86
HMGCR-204ENST00000504466 PTPRNQ16849 979 aa9.68□□□□□ -0.86
HMGCR-204ENST00000504466 PARP9Q8IXQ6 854 aa9.68□□□□□ -0.86
HMGCR-204ENST00000504466 BEGAINQ9BUH8 593 aa9.68□□□□□ -0.86
HMGCR-204ENST00000504466 CCNYL3P0C7X3 344 aa9.67□□□□□ -0.86
HMGCR-204ENST00000504466 MS4A1P11836 297 aa9.67□□□□□ -0.86
HMGCR-204ENST00000504466 LCE2AQ5TA79 106 aaPredicted RBP9.67□□□□□ -0.86
HMGCR-204ENST00000504466 SIAH2O43255 324 aa9.66□□□□□ -0.86
HMGCR-204ENST00000504466 DIXDC1Q155Q3 683 aa9.66□□□□□ -0.86
HMGCR-204ENST00000504466 AK7Q96M32 723 aa9.66□□□□□ -0.86
HMGCR-204ENST00000504466 EVA1BQ9NVM1 165 aa9.66□□□□□ -0.86
HMGCR-204ENST00000504466 GMPR2Q9P2T1 348 aaKnown RBP9.66□□□□□ -0.86
HMGCR-204ENST00000504466 MTMR2Q13614 643 aa9.65□□□□□ -0.86
HMGCR-204ENST00000504466 TBC1D2Q9BYX2 928 aa9.65□□□□□ -0.86
HMGCR-204ENST00000504466 RSBN1LQ6PCB5 846 aaPredicted RBP9.64□□□□□ -0.87
HMGCR-204ENST00000504466 PRR7Q8TB68 274 aa9.64□□□□□ -0.87
HMGCR-204ENST00000504466 DCAF1Q9Y4B6 1507 aa9.64□□□□□ -0.87
HMGCR-204ENST00000504466 SPTLC1O15269 473 aa9.63□□□□□ -0.87
HMGCR-204ENST00000504466 HPS1Q92902 700 aa9.63□□□□□ -0.87
HMGCR-204ENST00000504466 KCNH2Q12809 1159 aa9.62□□□□□ -0.87
HMGCR-204ENST00000504466 TREML4Q6UXN2 200 aa9.62□□□□□ -0.87
HMGCR-204ENST00000504466 ATP13A2Q9NQ11 1180 aa9.62□□□□□ -0.87
HMGCR-204ENST00000504466 C11orf95C9JLR9 678 aaPredicted RBP9.61□□□□□ -0.87
HMGCR-204ENST00000504466 SH3BP2P78314 561 aa9.61□□□□□ -0.87
HMGCR-204ENST00000504466 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
HMGCR-204ENST00000504466 PRPF38BQ5VTL8 546 aaKnown RBP9.59□□□□□ -0.87
HMGCR-204ENST00000504466 LYPD8Q6UX82 237 aa9.59□□□□□ -0.87
HMGCR-204ENST00000504466 EHBP1Q8NDI1 1231 aa9.59□□□□□ -0.87
HMGCR-204ENST00000504466 PCDHB15Q9Y5E8 787 aa9.59□□□□□ -0.87
HMGCR-204ENST00000504466 ALDH1A1P00352 501 aa9.58□□□□□ -0.88
HMGCR-204ENST00000504466 MPNDQ8N594 471 aa9.58□□□□□ -0.88
HMGCR-204ENST00000504466 TRIM47Q96LD4 638 aa9.58□□□□□ -0.88
HMGCR-204ENST00000504466 TUSC1Q2TAM9 212 aa9.57□□□□□ -0.88
HMGCR-204ENST00000504466 SENP2Q9HC62 589 aa9.57□□□□□ -0.88
HMGCR-204ENST00000504466 CFAP99D6REC4 459 aa9.56□□□□□ -0.88
HMGCR-204ENST00000504466 HRCP23327 699 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms