RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.12□□□□□ -0.63
COPS4-203ENST00000504274 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
COPS4-203ENST00000504274 TLL1O43897 1013 aa11.11□□□□□ -0.63
COPS4-203ENST00000504274 ZPR1O75312 459 aa11.11□□□□□ -0.63
COPS4-203ENST00000504274 TUSC1Q2TAM9 212 aa11.11□□□□□ -0.63
COPS4-203ENST00000504274 IL21Q9HBE4 155 aa11.11□□□□□ -0.63
COPS4-203ENST00000504274 BRICD5Q6PL45 260 aa11.1□□□□□ -0.63
COPS4-203ENST00000504274 ATP1B4Q9UN42 357 aaPredicted RBP11.1□□□□□ -0.63
COPS4-203ENST00000504274 LILRB3O75022 631 aa11.09□□□□□ -0.63
COPS4-203ENST00000504274 HRCP23327 699 aa11.09□□□□□ -0.63
COPS4-203ENST00000504274 NKX2-3Q8TAU0 364 aa11.09□□□□□ -0.63
COPS4-203ENST00000504274 C6orf229H3BNL8 230 aa11.08□□□□□ -0.64
COPS4-203ENST00000504274 ITGBL1O95965 494 aaPredicted RBP11.08□□□□□ -0.64
COPS4-203ENST00000504274 RTL5Q5HYW3 569 aaPredicted RBP11.08□□□□□ -0.64
COPS4-203ENST00000504274 Q3C1V9 767 aa11.07□□□□□ -0.64
COPS4-203ENST00000504274 FMNL1O95466 1100 aaPredicted RBP11.06□□□□□ -0.64
COPS4-203ENST00000504274 PRPF38BQ5VTL8 546 aaKnown RBP11.06□□□□□ -0.64
COPS4-203ENST00000504274 ZBTB3Q9H5J0 574 aa11.06□□□□□ -0.64
COPS4-203ENST00000504274 SALL2Q9Y467 1007 aaPredicted RBP11.06□□□□□ -0.64
COPS4-203ENST00000504274 KCNC4Q03721 635 aa11.05□□□□□ -0.64
COPS4-203ENST00000504274 MTMR2Q13614 643 aa11.05□□□□□ -0.64
COPS4-203ENST00000504274 FAM160A2Q8N612 972 aaPredicted RBP11.05□□□□□ -0.64
COPS4-203ENST00000504274 SPSB2Q99619 263 aa11.05□□□□□ -0.64
COPS4-203ENST00000504274 NUTM2BA6NNL0 878 aaPredicted RBP11.04□□□□□ -0.64
COPS4-203ENST00000504274 NUTM2EB1AL46 878 aaPredicted RBP11.04□□□□□ -0.64
COPS4-203ENST00000504274 NUTM2DQ5VT03 806 aaPredicted RBP11.04□□□□□ -0.64
COPS4-203ENST00000504274 NUTM2AQ8IVF1 878 aaPredicted RBP11.04□□□□□ -0.64
COPS4-203ENST00000504274 CFAP99D6REC4 459 aa11.03□□□□□ -0.64
COPS4-203ENST00000504274 ADH1BP00325 375 aa11.03□□□□□ -0.64
COPS4-203ENST00000504274 PPP2R2DQ66LE6 453 aa11.03□□□□□ -0.64
COPS4-203ENST00000504274 USB1Q9BQ65 265 aaKnown RBP11.03□□□□□ -0.64
COPS4-203ENST00000504274 RETREG3Q86VR2 466 aa11.02□□□□□ -0.65
COPS4-203ENST00000504274 RFC5P40937 340 aa11.01□□□□□ -0.65
COPS4-203ENST00000504274 PRR7Q8TB68 274 aa11.01□□□□□ -0.65
COPS4-203ENST00000504274 PRDM9Q9NQV7 894 aa11.01□□□□□ -0.65
COPS4-203ENST00000504274 SPDYE5A6NIY4 337 aa10.99□□□□□ -0.65
COPS4-203ENST00000504274 MSS51Q4VC12 460 aa10.98□□□□□ -0.65
COPS4-203ENST00000504274 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
COPS4-203ENST00000504274 S1PR4O95977 384 aa10.97□□□□□ -0.65
COPS4-203ENST00000504274 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
COPS4-203ENST00000504274 TSC1Q92574 1164 aa10.96□□□□□ -0.65
COPS4-203ENST00000504274 AP1G2O75843 785 aa10.94□□□□□ -0.66
COPS4-203ENST00000504274 DXOO77932 396 aaKnown RBP10.94□□□□□ -0.66
COPS4-203ENST00000504274 JUNDP17535 347 aa10.94□□□□□ -0.66
COPS4-203ENST00000504274 MMP16P51512 607 aa10.94□□□□□ -0.66
COPS4-203ENST00000504274 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
COPS4-203ENST00000504274 PER1O15534 1290 aaPredicted RBP10.93□□□□□ -0.66
COPS4-203ENST00000504274 IFFO2Q5TF58 517 aa10.93□□□□□ -0.66
COPS4-203ENST00000504274 PPEF1O14829 653 aaPredicted RBP10.92□□□□□ -0.66
COPS4-203ENST00000504274 DESI1Q6ICB0 168 aa10.92□□□□□ -0.66
COPS4-203ENST00000504274 PPP1R18Q6NYC8 613 aa10.92□□□□□ -0.66
COPS4-203ENST00000504274 TMEM259Q4ZIN3 620 aa10.9□□□□□ -0.66
COPS4-203ENST00000504274 LYPD8Q6UX82 237 aa10.9□□□□□ -0.66
COPS4-203ENST00000504274 GTF3C3Q9Y5Q9 886 aa10.9□□□□□ -0.66
COPS4-203ENST00000504274 RNF223E7ERA6 249 aa10.89□□□□□ -0.67
COPS4-203ENST00000504274 USP17L8P0C7I0 530 aa10.89□□□□□ -0.67
COPS4-203ENST00000504274 HELBQ8NG08 1087 aaPredicted RBP10.89□□□□□ -0.67
COPS4-203ENST00000504274 LRRN4Q8WUT4 740 aa10.89□□□□□ -0.67
COPS4-203ENST00000504274 SNRKQ9NRH2 765 aa10.89□□□□□ -0.67
COPS4-203ENST00000504274 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.88□□□□□ -0.67
COPS4-203ENST00000504274 HMX1Q9NP08 348 aaPredicted RBP10.87□□□□□ -0.67
COPS4-203ENST00000504274 A0A0G2JS52 829 aa10.86□□□□□ -0.67
COPS4-203ENST00000504274 PTPRNQ16849 979 aa10.86□□□□□ -0.67
COPS4-203ENST00000504274 BANK1Q8NDB2 785 aa10.86□□□□□ -0.67
COPS4-203ENST00000504274 FCF1Q9Y324 198 aaKnown RBP10.86□□□□□ -0.67
COPS4-203ENST00000504274 PLA2G2CQ5R387 149 aa10.85□□□□□ -0.67
COPS4-203ENST00000504274 NUDT12Q9BQG2 462 aa10.85□□□□□ -0.67
COPS4-203ENST00000504274 CCDC24Q8N4L8 307 aa10.84□□□□□ -0.67
COPS4-203ENST00000504274 F12P00748 615 aaPredicted RBP10.83□□□□□ -0.68
COPS4-203ENST00000504274 CCNYL3P0C7X3 344 aa10.83□□□□□ -0.68
COPS4-203ENST00000504274 GGCXP38435 758 aa10.83□□□□□ -0.68
COPS4-203ENST00000504274 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
COPS4-203ENST00000504274 MTMR14Q8NCE2 650 aa10.83□□□□□ -0.68
COPS4-203ENST00000504274 MAP10Q9P2G4 905 aa10.83□□□□□ -0.68
COPS4-203ENST00000504274 MCM6Q14566 821 aa10.82□□□□□ -0.68
COPS4-203ENST00000504274 ANKLE1Q8NAG6 615 aa10.82□□□□□ -0.68
COPS4-203ENST00000504274 EPS8L1Q8TE68 723 aa10.82□□□□□ -0.68
COPS4-203ENST00000504274 EVA1BQ9NVM1 165 aa10.82□□□□□ -0.68
COPS4-203ENST00000504274 EMID1Q96A84 441 aaPredicted RBP10.81□□□□□ -0.68
COPS4-203ENST00000504274 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
COPS4-203ENST00000504274 NR6A1Q15406 480 aa10.8□□□□□ -0.68
COPS4-203ENST00000504274 GJD4Q96KN9 370 aaPredicted RBP10.8□□□□□ -0.68
COPS4-203ENST00000504274 TRIM34Q9BYJ4 488 aa10.8□□□□□ -0.68
COPS4-203ENST00000504274 CTHP32929 405 aa10.79□□□□□ -0.68
COPS4-203ENST00000504274 LIAT1Q6ZQX7 453 aa10.77□□□□□ -0.69
COPS4-203ENST00000504274 FLIIQ13045 1269 aa10.75□□□□□ -0.69
COPS4-203ENST00000504274 UNC93B1Q9H1C4 597 aa10.75□□□□□ -0.69
COPS4-203ENST00000504274 SOCS7O14512 581 aa10.73□□□□□ -0.69
COPS4-203ENST00000504274 POM121Q96HA1 1249 aa10.73□□□□□ -0.69
COPS4-203ENST00000504274 GPR37L1O60883 481 aa10.72□□□□□ -0.69
COPS4-203ENST00000504274 SLC19A1P41440 591 aa10.71□□□□□ -0.69
COPS4-203ENST00000504274 BAP1Q92560 729 aa10.71□□□□□ -0.69
COPS4-203ENST00000504274 TBC1D2BQ9UPU7 963 aa10.71□□□□□ -0.69
COPS4-203ENST00000504274 ZBTB24O43167 697 aaPredicted RBP10.69□□□□□ -0.7
COPS4-203ENST00000504274 RPIAP49247 311 aa10.69□□□□□ -0.7
COPS4-203ENST00000504274 TRIM32Q13049 653 aa10.69□□□□□ -0.7
COPS4-203ENST00000504274 LINC01559Q495D7 138 aa10.69□□□□□ -0.7
COPS4-203ENST00000504274 PRKD2Q9BZL6 878 aa10.69□□□□□ -0.7
COPS4-203ENST00000504274 GDPD2Q9HCC8 539 aa10.69□□□□□ -0.7
COPS4-203ENST00000504274 FKBPLQ9UIM3 349 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms