RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 CDCA8Q53HL2 280 aa19.31■□□□□ 0.68
CYSTM1-202ENST00000504227 C14orf37Q86TY3 774 aa19.31■□□□□ 0.68
CYSTM1-202ENST00000504227 EVC2Q86UK5 1308 aa19.3■□□□□ 0.68
CYSTM1-202ENST00000504227 RBM33Q96EV2 1170 aaKnown RBP19.29■□□□□ 0.68
CYSTM1-202ENST00000504227 QRICH2Q9H0J4 1663 aa19.29■□□□□ 0.68
CYSTM1-202ENST00000504227 C11orf95C9JLR9 678 aaPredicted RBP19.27■□□□□ 0.68
CYSTM1-202ENST00000504227 CDK19Q9BWU1 502 aa19.27■□□□□ 0.68
CYSTM1-202ENST00000504227 TMEM94Q12767 1356 aa19.27■□□□□ 0.68
CYSTM1-202ENST00000504227 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
CYSTM1-202ENST00000504227 WASLO00401 505 aaPredicted RBP19.26■□□□□ 0.67
CYSTM1-202ENST00000504227 STRCP1A6NGW2 1772 aa19.26■□□□□ 0.67
CYSTM1-202ENST00000504227 DISP3Q9P2K9 1392 aa19.25■□□□□ 0.67
CYSTM1-202ENST00000504227 SRPK2P78362 688 aaKnown RBP19.25■□□□□ 0.67
CYSTM1-202ENST00000504227 PUS7Q96PZ0 661 aaKnown RBP19.25■□□□□ 0.67
CYSTM1-202ENST00000504227 POLR3GLQ9BT43 218 aa19.25■□□□□ 0.67
CYSTM1-202ENST00000504227 C19orf44Q9H6X5 657 aa19.24■□□□□ 0.67
CYSTM1-202ENST00000504227 KIF7Q2M1P5 1343 aa19.24■□□□□ 0.67
CYSTM1-202ENST00000504227 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.23■□□□□ 0.67
CYSTM1-202ENST00000504227 CCDC7Q96M83 1385 aa19.23■□□□□ 0.67
CYSTM1-202ENST00000504227 ADGRL3Q9HAR2 1447 aa19.23■□□□□ 0.67
CYSTM1-202ENST00000504227 LRRC7Q96NW7 1537 aa19.22■□□□□ 0.67
CYSTM1-202ENST00000504227 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
CYSTM1-202ENST00000504227 WASHC2AQ641Q2 1341 aa19.22■□□□□ 0.67
CYSTM1-202ENST00000504227 TULP4Q9NRJ4 1543 aa19.2■□□□□ 0.66
CYSTM1-202ENST00000504227 MSH6P52701 1360 aa19.19■□□□□ 0.66
CYSTM1-202ENST00000504227 ATF3P18847 181 aa19.19■□□□□ 0.66
CYSTM1-202ENST00000504227 ADGRB2O60241 1585 aa19.19■□□□□ 0.66
CYSTM1-202ENST00000504227 CADPS2Q86UW7 1296 aa19.17■□□□□ 0.66
CYSTM1-202ENST00000504227 NUDT16Q96DE0 195 aaKnown RBP19.17■□□□□ 0.66
CYSTM1-202ENST00000504227 LTBP4Q8N2S1 1624 aa19.17■□□□□ 0.66
CYSTM1-202ENST00000504227 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
CYSTM1-202ENST00000504227 NUTM2FA1L443 756 aa19.16■□□□□ 0.66
CYSTM1-202ENST00000504227 TMC1Q8TDI8 760 aa19.15■□□□□ 0.66
CYSTM1-202ENST00000504227 DCCP43146 1447 aa19.15■□□□□ 0.66
CYSTM1-202ENST00000504227 CDC42BPGQ6DT37 1551 aa19.15■□□□□ 0.66
CYSTM1-202ENST00000504227 NALCNQ8IZF0 1738 aa19.14■□□□□ 0.66
CYSTM1-202ENST00000504227 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
CYSTM1-202ENST00000504227 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
CYSTM1-202ENST00000504227 ANKARQ7Z5J8 1434 aa19.12■□□□□ 0.65
CYSTM1-202ENST00000504227 PRR36Q9H6K5 1346 aa19.12■□□□□ 0.65
CYSTM1-202ENST00000504227 SLC12A5Q9H2X9 1139 aa19.12■□□□□ 0.65
CYSTM1-202ENST00000504227 NINLQ9Y2I6 1382 aa19.11■□□□□ 0.65
CYSTM1-202ENST00000504227 CABP1Q9NZU7 370 aa19.11■□□□□ 0.65
CYSTM1-202ENST00000504227 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
CYSTM1-202ENST00000504227 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.65
CYSTM1-202ENST00000504227 PLEKHG3A1L390 1219 aa19.08■□□□□ 0.64
CYSTM1-202ENST00000504227 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.64
CYSTM1-202ENST00000504227 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
CYSTM1-202ENST00000504227 ATP7BP35670 1465 aa19.08■□□□□ 0.64
CYSTM1-202ENST00000504227 PPIP5K1Q6PFW1 1433 aa19.08■□□□□ 0.64
CYSTM1-202ENST00000504227 PANK3Q9H999 370 aa19.07■□□□□ 0.64
CYSTM1-202ENST00000504227 SLAIN2Q9P270 581 aa19.07■□□□□ 0.64
CYSTM1-202ENST00000504227 C1orf167Q5SNV9 1468 aa19.06■□□□□ 0.64
CYSTM1-202ENST00000504227 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
CYSTM1-202ENST00000504227 CERKQ8TCT0 537 aa19.06■□□□□ 0.64
CYSTM1-202ENST00000504227 NGDNQ8NEJ9 315 aaKnown RBP19.05■□□□□ 0.64
CYSTM1-202ENST00000504227 PMFBP1Q8TBY8 1022 aa19.05■□□□□ 0.64
CYSTM1-202ENST00000504227 PHF8Q9UPP1 1060 aa19.05■□□□□ 0.64
CYSTM1-202ENST00000504227 MST1RQ04912 1400 aa19.05■□□□□ 0.64
CYSTM1-202ENST00000504227 ORAI2Q96SN7 254 aa19.04■□□□□ 0.64
CYSTM1-202ENST00000504227 ZNF692Q9BU19 519 aaPredicted RBP19.04■□□□□ 0.64
CYSTM1-202ENST00000504227 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
CYSTM1-202ENST00000504227 ACEP12821 1306 aa19.02■□□□□ 0.64
CYSTM1-202ENST00000504227 TOM1O60784 492 aa19.02■□□□□ 0.64
CYSTM1-202ENST00000504227 ANKRD36BQ8N2N9 1353 aa19.02■□□□□ 0.64
CYSTM1-202ENST00000504227 IQSEC2Q5JU85 1478 aa19.01■□□□□ 0.63
CYSTM1-202ENST00000504227 KNSTRNQ9Y448 316 aa19■□□□□ 0.63
CYSTM1-202ENST00000504227 MYOM1P52179 1685 aa19■□□□□ 0.63
CYSTM1-202ENST00000504227 RGPD8O14715 1765 aaPredicted RBP19■□□□□ 0.63
CYSTM1-202ENST00000504227 ITSN1Q15811 1721 aa19■□□□□ 0.63
CYSTM1-202ENST00000504227 KTN1Q86UP2 1357 aaKnown RBP18.99■□□□□ 0.63
CYSTM1-202ENST00000504227 CARD14Q9BXL6 1004 aa18.99■□□□□ 0.63
CYSTM1-202ENST00000504227 TOPAZ1Q8N9V7 1692 aa18.98■□□□□ 0.63
CYSTM1-202ENST00000504227 A0A1W2PP64 1363 aa18.98■□□□□ 0.63
CYSTM1-202ENST00000504227 POLR3AO14802 1390 aaPredicted RBP18.98■□□□□ 0.63
CYSTM1-202ENST00000504227 PSME1Q06323 249 aa18.98■□□□□ 0.63
CYSTM1-202ENST00000504227 BRINP3Q76B58 766 aa18.98■□□□□ 0.63
CYSTM1-202ENST00000504227 CPSF1Q10570 1443 aaKnown RBP18.98■□□□□ 0.63
CYSTM1-202ENST00000504227 CD163L1Q9NR16 1453 aa18.97■□□□□ 0.63
CYSTM1-202ENST00000504227 UBAP1LF5GYI3 381 aa18.97■□□□□ 0.63
CYSTM1-202ENST00000504227 FOXO3O43524 673 aa18.97■□□□□ 0.63
CYSTM1-202ENST00000504227 DIEXFQ68CQ4 756 aaKnown RBP18.97■□□□□ 0.63
CYSTM1-202ENST00000504227 PER1O15534 1290 aaPredicted RBP18.96■□□□□ 0.63
CYSTM1-202ENST00000504227 NSD3Q9BZ95 1437 aa18.94■□□□□ 0.62
CYSTM1-202ENST00000504227 NPHP3Q7Z494 1330 aa18.94■□□□□ 0.62
CYSTM1-202ENST00000504227 KIF1AQ12756 1690 aa18.93■□□□□ 0.62
CYSTM1-202ENST00000504227 KRT28Q7Z3Y7 464 aa18.93■□□□□ 0.62
CYSTM1-202ENST00000504227 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
CYSTM1-202ENST00000504227 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
CYSTM1-202ENST00000504227 USP6P35125 1406 aa18.92■□□□□ 0.62
CYSTM1-202ENST00000504227 EDC4Q6P2E9 1401 aaKnown RBP18.92■□□□□ 0.62
CYSTM1-202ENST00000504227 PIP4K2BP78356 416 aa18.92■□□□□ 0.62
CYSTM1-202ENST00000504227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.92■□□□□ 0.62
CYSTM1-202ENST00000504227 TTC21BQ7Z4L5 1316 aa18.91■□□□□ 0.62
CYSTM1-202ENST00000504227 SCAF1Q9H7N4 1312 aaKnown RBP18.91■□□□□ 0.62
CYSTM1-202ENST00000504227 PAK3O75914 559 aaPredicted RBP18.9■□□□□ 0.62
CYSTM1-202ENST00000504227 XPCQ01831 940 aaPredicted RBP18.9■□□□□ 0.62
CYSTM1-202ENST00000504227 TTC21AQ8NDW8 1320 aa18.9■□□□□ 0.62
CYSTM1-202ENST00000504227 AKAP12Q02952 1782 aa18.89■□□□□ 0.61
CYSTM1-202ENST00000504227 AMER1Q5JTC6 1135 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 185.3 ms