RNA–Protein interactions for RNA: ENST00000503477.5

AFF1-204, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-204ENST00000503477 PTCH1Q13635 1447 aa23.23■■□□□ 1.31
AFF1-204ENST00000503477 XRN1Q8IZH2 1706 aaKnown RBP23.22■■□□□ 1.31
AFF1-204ENST00000503477 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
AFF1-204ENST00000503477 CHD2O14647 1828 aaKnown RBP23.21■■□□□ 1.31
AFF1-204ENST00000503477 HSPA2P54652 639 aa23.2■■□□□ 1.3
AFF1-204ENST00000503477 ROBO2Q9HCK4 1378 aa23.2■■□□□ 1.3
AFF1-204ENST00000503477 WAPLQ7Z5K2 1190 aa23.19■■□□□ 1.3
AFF1-204ENST00000503477 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
AFF1-204ENST00000503477 SAFB2Q14151 953 aaKnown RBP eCLIP23.17■■□□□ 1.34e-6■■■■□ 19.5
AFF1-204ENST00000503477 PLEKHH1Q9ULM0 1364 aa23.17■■□□□ 1.3
AFF1-204ENST00000503477 MINK1Q8N4C8 1332 aaPredicted RBP23.16■■□□□ 1.3
AFF1-204ENST00000503477 KCNA6P17658 529 aa23.14■■□□□ 1.29
AFF1-204ENST00000503477 STRCQ7RTU9 1775 aa23.14■■□□□ 1.29
AFF1-204ENST00000503477 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
AFF1-204ENST00000503477 ADGRB2O60241 1585 aa23.12■■□□□ 1.29
AFF1-204ENST00000503477 ATAD2Q6PL18 1390 aa23.11■■□□□ 1.29
AFF1-204ENST00000503477 MYOM1P52179 1685 aa23.1■■□□□ 1.29
AFF1-204ENST00000503477 NINLQ9Y2I6 1382 aa23.1■■□□□ 1.29
AFF1-204ENST00000503477 WASLO00401 505 aaPredicted RBP23.1■■□□□ 1.29
AFF1-204ENST00000503477 CDK19Q9BWU1 502 aa23.1■■□□□ 1.29
AFF1-204ENST00000503477 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.09■■□□□ 1.29
AFF1-204ENST00000503477 SRPK2P78362 688 aaKnown RBP23.09■■□□□ 1.29
AFF1-204ENST00000503477 ANP32CO43423 234 aa23.07■■□□□ 1.28
AFF1-204ENST00000503477 CABP2Q9NPB3 220 aa23.07■■□□□ 1.28
AFF1-204ENST00000503477 NKTRP30414 1462 aaKnown RBP23.07■■□□□ 1.28
AFF1-204ENST00000503477 PANK3Q9H999 370 aa23.06■■□□□ 1.28
AFF1-204ENST00000503477 DMRT2Q9Y5R5 561 aa23.06■■□□□ 1.28
AFF1-204ENST00000503477 MIER1Q8N108 512 aa23.05■■□□□ 1.28
AFF1-204ENST00000503477 PER1O15534 1290 aaPredicted RBP23.04■■□□□ 1.28
AFF1-204ENST00000503477 TMC1Q8TDI8 760 aa23.01■■□□□ 1.27
AFF1-204ENST00000503477 SLC12A5Q9H2X9 1139 aa23■■□□□ 1.27
AFF1-204ENST00000503477 NCOA3Q9Y6Q9 1424 aa22.99■■□□□ 1.27
AFF1-204ENST00000503477 ANKRD36BQ8N2N9 1353 aa22.98■■□□□ 1.27
AFF1-204ENST00000503477 ADGRL3Q9HAR2 1447 aa22.98■■□□□ 1.27
AFF1-204ENST00000503477 PROSER2Q86WR7 435 aaPredicted RBP22.98■■□□□ 1.27
AFF1-204ENST00000503477 NUDT16Q96DE0 195 aaKnown RBP22.98■■□□□ 1.27
AFF1-204ENST00000503477 KNSTRNQ9Y448 316 aa22.98■■□□□ 1.27
AFF1-204ENST00000503477 CCDC61Q9Y6R9 512 aa22.98■■□□□ 1.27
AFF1-204ENST00000503477 KTN1Q86UP2 1357 aaKnown RBP22.97■■□□□ 1.27
AFF1-204ENST00000503477 TERF2IPQ9NYB0 399 aa22.97■■□□□ 1.27
AFF1-204ENST00000503477 CDC42BPGQ6DT37 1551 aa22.97■■□□□ 1.27
AFF1-204ENST00000503477 PRKRIP1Q9H875 184 aaPredicted RBP22.96■■□□□ 1.27
AFF1-204ENST00000503477 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
AFF1-204ENST00000503477 ATP7BP35670 1465 aa22.95■■□□□ 1.27
AFF1-204ENST00000503477 NPC1L1Q9UHC9 1359 aa22.95■■□□□ 1.26
AFF1-204ENST00000503477 STRCP1A6NGW2 1772 aa22.94■■□□□ 1.26
AFF1-204ENST00000503477 ANKARQ7Z5J8 1434 aa22.94■■□□□ 1.26
AFF1-204ENST00000503477 CABP1Q9NZU7 370 aa22.93■■□□□ 1.26
AFF1-204ENST00000503477 CARD14Q9BXL6 1004 aa22.92■■□□□ 1.26
AFF1-204ENST00000503477 FMN2Q9NZ56 1722 aa22.92■■□□□ 1.26
AFF1-204ENST00000503477 PPIP5K1Q6PFW1 1433 aa22.92■■□□□ 1.26
AFF1-204ENST00000503477 PRR36Q9H6K5 1346 aa22.92■■□□□ 1.26
AFF1-204ENST00000503477 CCER2I3L3R5 266 aa22.92■■□□□ 1.26
AFF1-204ENST00000503477 HDGFL2Q7Z4V5 671 aaPredicted RBP22.92■■□□□ 1.26
AFF1-204ENST00000503477 TOPAZ1Q8N9V7 1692 aa22.91■■□□□ 1.26
AFF1-204ENST00000503477 RALBP1Q15311 655 aa22.91■■□□□ 1.26
AFF1-204ENST00000503477 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
AFF1-204ENST00000503477 ITSN1Q15811 1721 aa22.9■■□□□ 1.26
AFF1-204ENST00000503477 AMER1Q5JTC6 1135 aaPredicted RBP22.9■■□□□ 1.26
AFF1-204ENST00000503477 USP32Q8NFA0 1604 aa22.9■■□□□ 1.26
AFF1-204ENST00000503477 A0A1W2PP64 1363 aa22.89■■□□□ 1.26
AFF1-204ENST00000503477 PLEKHG3A1L390 1219 aa22.89■■□□□ 1.25
AFF1-204ENST00000503477 C14orf37Q86TY3 774 aa22.89■■□□□ 1.25
AFF1-204ENST00000503477 C19orf44Q9H6X5 657 aa22.89■■□□□ 1.25
AFF1-204ENST00000503477 TMEM94Q12767 1356 aa22.88■■□□□ 1.25
AFF1-204ENST00000503477 ZNF692Q9BU19 519 aaPredicted RBP22.88■■□□□ 1.25
AFF1-204ENST00000503477 CPSF1Q10570 1443 aaKnown RBP22.88■■□□□ 1.25
AFF1-204ENST00000503477 NSD3Q9BZ95 1437 aa22.87■■□□□ 1.25
AFF1-204ENST00000503477 DCCP43146 1447 aa22.86■■□□□ 1.25
AFF1-204ENST00000503477 PARD3Q8TEW0 1356 aa22.86■■□□□ 1.25
AFF1-204ENST00000503477 RBM33Q96EV2 1170 aaKnown RBP22.85■■□□□ 1.25
AFF1-204ENST00000503477 CGNL1Q0VF96 1302 aa22.85■■□□□ 1.25
AFF1-204ENST00000503477 ZNF335Q9H4Z2 1342 aaPredicted RBP22.85■■□□□ 1.25
AFF1-204ENST00000503477 NSD2O96028 1365 aa22.84■■□□□ 1.25
AFF1-204ENST00000503477 AKAP12Q02952 1782 aa22.83■■□□□ 1.25
AFF1-204ENST00000503477 LRRC7Q96NW7 1537 aa22.83■■□□□ 1.25
AFF1-204ENST00000503477 NUTM2FA1L443 756 aa22.82■■□□□ 1.24
AFF1-204ENST00000503477 CC2D1BQ5T0F9 858 aaKnown RBP22.82■■□□□ 1.24
AFF1-204ENST00000503477 RGPD8O14715 1765 aaPredicted RBP22.81■■□□□ 1.24
AFF1-204ENST00000503477 MON2Q7Z3U7 1717 aa22.81■■□□□ 1.24
AFF1-204ENST00000503477 EDC4Q6P2E9 1401 aaKnown RBP22.81■■□□□ 1.24
AFF1-204ENST00000503477 POLR3AO14802 1390 aaPredicted RBP22.8■■□□□ 1.24
AFF1-204ENST00000503477 ACEP12821 1306 aa22.8■■□□□ 1.24
AFF1-204ENST00000503477 MYBBP1AQ9BQG0 1328 aaKnown RBP22.8■■□□□ 1.24
AFF1-204ENST00000503477 MSH6P52701 1360 aa22.8■■□□□ 1.24
AFF1-204ENST00000503477 XIRP1Q702N8 1843 aaKnown RBP22.79■■□□□ 1.24
AFF1-204ENST00000503477 ATF3P18847 181 aa22.79■■□□□ 1.24
AFF1-204ENST00000503477 CADPS2Q86UW7 1296 aa22.79■■□□□ 1.24
AFF1-204ENST00000503477 CNGB1Q14028 1251 aaPredicted RBP22.77■■□□□ 1.24
AFF1-204ENST00000503477 NGDNQ8NEJ9 315 aaKnown RBP22.75■■□□□ 1.23
AFF1-204ENST00000503477 PHF8Q9UPP1 1060 aa22.75■■□□□ 1.23
AFF1-204ENST00000503477 BRD4O60885 1362 aaPredicted RBP22.75■■□□□ 1.23
AFF1-204ENST00000503477 USP6P35125 1406 aa22.75■■□□□ 1.23
AFF1-204ENST00000503477 FYB1O15117 783 aa22.73■■□□□ 1.23
AFF1-204ENST00000503477 NLRP13Q86W25 1043 aa22.73■■□□□ 1.23
AFF1-204ENST00000503477 PMFBP1Q8TBY8 1022 aa22.73■■□□□ 1.23
AFF1-204ENST00000503477 C1orf167Q5SNV9 1468 aa22.73■■□□□ 1.23
AFF1-204ENST00000503477 ANKRD26Q9UPS8 1709 aa22.73■■□□□ 1.23
AFF1-204ENST00000503477 MST1RQ04912 1400 aa22.72■■□□□ 1.23
AFF1-204ENST00000503477 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms