RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 DSG2Q14126 1118 aa10.95□□□□□ -0.66
PTCD2-206ENST00000503315 ILDR1Q86SU0 546 aaPredicted RBP10.95□□□□□ -0.66
PTCD2-206ENST00000503315 C9orf84Q5VXU9 1444 aa10.94□□□□□ -0.66
PTCD2-206ENST00000503315 LOC105371045A0A1W2PR82 267 aa10.94□□□□□ -0.66
PTCD2-206ENST00000503315 ITSN2Q9NZM3 1697 aa10.94□□□□□ -0.66
PTCD2-206ENST00000503315 FECHP22830 423 aa10.93□□□□□ -0.66
PTCD2-206ENST00000503315 IRF5Q13568 498 aa10.93□□□□□ -0.66
PTCD2-206ENST00000503315 MLECQ14165 292 aa10.93□□□□□ -0.66
PTCD2-206ENST00000503315 COG6Q9Y2V7 657 aa10.93□□□□□ -0.66
PTCD2-206ENST00000503315 ARHGEF12Q9NZN5 1544 aa10.93□□□□□ -0.66
PTCD2-206ENST00000503315 SETD1BQ9UPS6 1966 aaKnown RBP10.93□□□□□ -0.66
PTCD2-206ENST00000503315 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
PTCD2-206ENST00000503315 POTEB2H3BUK9 544 aa10.92□□□□□ -0.66
PTCD2-206ENST00000503315 ABCC1P33527 1531 aa10.92□□□□□ -0.66
PTCD2-206ENST00000503315 MLH3Q9UHC1 1453 aa10.92□□□□□ -0.66
PTCD2-206ENST00000503315 DIP2CQ9Y2E4 1556 aa10.92□□□□□ -0.66
PTCD2-206ENST00000503315 KIDINS220Q9ULH0 1771 aa10.91□□□□□ -0.66
PTCD2-206ENST00000503315 TRAPPC8Q9Y2L5 1435 aa10.91□□□□□ -0.66
PTCD2-206ENST00000503315 REREQ9P2R6 1566 aa10.91□□□□□ -0.66
PTCD2-206ENST00000503315 HMGB1P09429 215 aaKnown RBP10.91□□□□□ -0.66
PTCD2-206ENST00000503315 OSBPP22059 807 aa10.91□□□□□ -0.66
PTCD2-206ENST00000503315 FOXK1P85037 733 aa10.91□□□□□ -0.66
PTCD2-206ENST00000503315 ABCA6Q8N139 1617 aa10.9□□□□□ -0.66
PTCD2-206ENST00000503315 GPCPD1Q9NPB8 672 aa10.9□□□□□ -0.66
PTCD2-206ENST00000503315 SAMD9LQ8IVG5 1584 aa10.89□□□□□ -0.67
PTCD2-206ENST00000503315 GPATCH8Q9UKJ3 1502 aaKnown RBP10.89□□□□□ -0.67
PTCD2-206ENST00000503315 IGSF3O75054 1194 aa10.89□□□□□ -0.67
PTCD2-206ENST00000503315 OXER1Q8TDS5 423 aa10.89□□□□□ -0.67
PTCD2-206ENST00000503315 TMEM106CQ9BVX2 250 aa10.89□□□□□ -0.67
PTCD2-206ENST00000503315 MYT1LQ9UL68 1186 aa10.89□□□□□ -0.67
PTCD2-206ENST00000503315 BANK1Q8NDB2 785 aa10.88□□□□□ -0.67
PTCD2-206ENST00000503315 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
PTCD2-206ENST00000503315 KCNA1Q09470 495 aa10.87□□□□□ -0.67
PTCD2-206ENST00000503315 CALR3Q96L12 384 aaKnown RBP10.87□□□□□ -0.67
PTCD2-206ENST00000503315 AGLP35573 1532 aa10.87□□□□□ -0.67
PTCD2-206ENST00000503315 PREX1Q8TCU6 1659 aa10.86□□□□□ -0.67
PTCD2-206ENST00000503315 CEBPAP49715 358 aaPredicted RBP10.86□□□□□ -0.67
PTCD2-206ENST00000503315 HNRNPMP52272 730 aaKnown RBP eCLIP10.86□□□□□ -0.67
PTCD2-206ENST00000503315 HSPA2P54652 639 aa10.86□□□□□ -0.67
PTCD2-206ENST00000503315 REPIN1Q9BWE0 567 aaKnown RBP10.86□□□□□ -0.67
PTCD2-206ENST00000503315 PRM3Q9NNZ6 103 aa10.86□□□□□ -0.67
PTCD2-206ENST00000503315 C3P01024 1663 aa10.86□□□□□ -0.67
PTCD2-206ENST00000503315 CEP162Q5TB80 1403 aa10.86□□□□□ -0.67
PTCD2-206ENST00000503315 SYCP2Q9BX26 1530 aa10.85□□□□□ -0.67
PTCD2-206ENST00000503315 SSTR3P32745 418 aaPredicted RBP10.85□□□□□ -0.67
PTCD2-206ENST00000503315 PTGDRQ13258 359 aa10.85□□□□□ -0.67
PTCD2-206ENST00000503315 PROCA1Q8NCQ7 364 aaPredicted RBP10.85□□□□□ -0.67
PTCD2-206ENST00000503315 POLR3EQ9NVU0 708 aa10.85□□□□□ -0.67
PTCD2-206ENST00000503315 MTUS2Q5JR59 1369 aa10.85□□□□□ -0.67
PTCD2-206ENST00000503315 KIAA1107Q9UPP5 1409 aa10.85□□□□□ -0.67
PTCD2-206ENST00000503315 PLPP6Q8IY26 295 aa10.84□□□□□ -0.67
PTCD2-206ENST00000503315 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
PTCD2-206ENST00000503315 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
PTCD2-206ENST00000503315 CFDP1Q9UEE9 299 aaPredicted RBP10.84□□□□□ -0.67
PTCD2-206ENST00000503315 CCNB3Q8WWL7 1395 aa10.84□□□□□ -0.67
PTCD2-206ENST00000503315 MDM2Q00987 491 aaPredicted RBP10.84□□□□□ -0.67
PTCD2-206ENST00000503315 SUPT6HQ7KZ85 1726 aaKnown RBP10.83□□□□□ -0.68
PTCD2-206ENST00000503315 GALR2O43603 387 aaPredicted RBP10.83□□□□□ -0.68
PTCD2-206ENST00000503315 BRD1O95696 1058 aa10.83□□□□□ -0.68
PTCD2-206ENST00000503315 PTGER2P43116 358 aa10.83□□□□□ -0.68
PTCD2-206ENST00000503315 DDX12PQ92771 950 aa10.83□□□□□ -0.68
PTCD2-206ENST00000503315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.83□□□□□ -0.686e-7■■□□□ 12.6
PTCD2-206ENST00000503315 STRCQ7RTU9 1775 aa10.82□□□□□ -0.68
PTCD2-206ENST00000503315 TIAM1Q13009 1591 aa10.82□□□□□ -0.68
PTCD2-206ENST00000503315 PLEKHH2Q8IVE3 1493 aa10.82□□□□□ -0.68
PTCD2-206ENST00000503315 TMEM259Q4ZIN3 620 aa10.82□□□□□ -0.68
PTCD2-206ENST00000503315 EHBP1L1Q8N3D4 1523 aa10.82□□□□□ -0.68
PTCD2-206ENST00000503315 SPAG9O60271 1321 aaKnown RBP10.81□□□□□ -0.68
PTCD2-206ENST00000503315 ATP7AQ04656 1500 aa10.81□□□□□ -0.68
PTCD2-206ENST00000503315 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
PTCD2-206ENST00000503315 INO80Q9ULG1 1556 aaPredicted RBP10.81□□□□□ -0.68
PTCD2-206ENST00000503315 ZNF644Q9H582 1327 aaPredicted RBP10.81□□□□□ -0.68
PTCD2-206ENST00000503315 CLK2P49760 499 aaKnown RBP10.8□□□□□ -0.68
PTCD2-206ENST00000503315 FBXO41Q8TF61 875 aa10.8□□□□□ -0.68
PTCD2-206ENST00000503315 USTQ9Y2C2 406 aa10.8□□□□□ -0.68
PTCD2-206ENST00000503315 MBD5Q9P267 1494 aa10.8□□□□□ -0.68
PTCD2-206ENST00000503315 MROH2AA6NES4 1674 aa10.79□□□□□ -0.68
PTCD2-206ENST00000503315 TBC1D12O60347 775 aa10.79□□□□□ -0.68
PTCD2-206ENST00000503315 CSB-PGBD3P0DP91 1061 aa10.79□□□□□ -0.68
PTCD2-206ENST00000503315 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.79□□□□□ -0.68
PTCD2-206ENST00000503315 ESF1Q9H501 851 aaKnown RBP10.79□□□□□ -0.68
PTCD2-206ENST00000503315 SNRKQ9NRH2 765 aa10.79□□□□□ -0.68
PTCD2-206ENST00000503315 AMOTL2Q9Y2J4 779 aa10.79□□□□□ -0.68
PTCD2-206ENST00000503315 ADGBQ8N7X0 1667 aa10.79□□□□□ -0.68
PTCD2-206ENST00000503315 PLXNC1O60486 1568 aa10.79□□□□□ -0.68
PTCD2-206ENST00000503315 DIXDC1Q155Q3 683 aa10.78□□□□□ -0.68
PTCD2-206ENST00000503315 UHRF1BP1Q6BDS2 1440 aa10.78□□□□□ -0.68
PTCD2-206ENST00000503315 CNTLNQ9NXG0 1405 aa10.78□□□□□ -0.68
PTCD2-206ENST00000503315 RFC5P40937 340 aa10.77□□□□□ -0.68
PTCD2-206ENST00000503315 PBXIP1Q96AQ6 731 aa10.77□□□□□ -0.68
PTCD2-206ENST00000503315 FAM163AQ96GL9 167 aaPredicted RBP10.77□□□□□ -0.68
PTCD2-206ENST00000503315 CLTCQ00610 1675 aaKnown RBP10.77□□□□□ -0.69
PTCD2-206ENST00000503315 A2MP01023 1474 aa10.77□□□□□ -0.69
PTCD2-206ENST00000503315 CCDC27Q2M243 656 aa10.76□□□□□ -0.69
PTCD2-206ENST00000503315 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.69
PTCD2-206ENST00000503315 ZMYM3Q14202 1370 aa10.76□□□□□ -0.69
PTCD2-206ENST00000503315 RTEL1-TNFRSF6BF6WH68 1400 aa10.76□□□□□ -0.69
PTCD2-206ENST00000503315 NCOA2Q15596 1464 aa10.76□□□□□ -0.69
PTCD2-206ENST00000503315 MYSM1Q5VVJ2 828 aa10.75□□□□□ -0.69
PTCD2-206ENST00000503315 GLMNQ92990 594 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms