RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 BCL11BQ9C0K0 894 aaPredicted RBP15.5■□□□□ 0.07
USP46-204ENST00000503060 MYO5BQ9ULV0 1848 aa15.5■□□□□ 0.07
USP46-204ENST00000503060 NUDCQ9Y266 331 aa15.49■□□□□ 0.07
USP46-204ENST00000503060 INSRP06213 1382 aa15.49■□□□□ 0.07
USP46-204ENST00000503060 CLTCQ00610 1675 aaKnown RBP15.48■□□□□ 0.07
USP46-204ENST00000503060 FGD1P98174 961 aa15.48■□□□□ 0.07
USP46-204ENST00000503060 VSIG10Q8N0Z9 540 aa15.47■□□□□ 0.07
USP46-204ENST00000503060 PPP2R1AP30153 589 aa15.47■□□□□ 0.07
USP46-204ENST00000503060 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
USP46-204ENST00000503060 SENP3-EIF4A1A0A087X0R7 540 aa15.46■□□□□ 0.07
USP46-204ENST00000503060 IRX6P78412 446 aaPredicted RBP15.46■□□□□ 0.07
USP46-204ENST00000503060 ARHGEF28Q8N1W1 1705 aaKnown RBP15.46■□□□□ 0.07
USP46-204ENST00000503060 ERICH6BQ5W0A0 696 aa15.46■□□□□ 0.07
USP46-204ENST00000503060 SPATA31D1Q6ZQQ2 1576 aa15.45■□□□□ 0.06
USP46-204ENST00000503060 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
USP46-204ENST00000503060 CARD14Q9BXL6 1004 aa15.44■□□□□ 0.06
USP46-204ENST00000503060 MLECQ14165 292 aa15.44■□□□□ 0.06
USP46-204ENST00000503060 PUS7Q96PZ0 661 aaKnown RBP15.41■□□□□ 0.06
USP46-204ENST00000503060 STAG3Q9UJ98 1225 aa15.41■□□□□ 0.06
USP46-204ENST00000503060 TULP4Q9NRJ4 1543 aa15.4■□□□□ 0.06
USP46-204ENST00000503060 EVC2Q86UK5 1308 aa15.4■□□□□ 0.06
USP46-204ENST00000503060 A2ML1A8K2U0 1454 aa15.4■□□□□ 0.06
USP46-204ENST00000503060 PDE3BQ13370 1112 aa15.39■□□□□ 0.05
USP46-204ENST00000503060 RNF123Q5XPI4 1314 aa15.39■□□□□ 0.05
USP46-204ENST00000503060 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
USP46-204ENST00000503060 ADAMTS8Q9UP79 889 aa15.38■□□□□ 0.05
USP46-204ENST00000503060 ALKQ9UM73 1620 aa15.38■□□□□ 0.05
USP46-204ENST00000503060 HSP90B1P14625 803 aaKnown RBP15.38■□□□□ 0.05
USP46-204ENST00000503060 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
USP46-204ENST00000503060 STK26Q9P289 416 aa15.38■□□□□ 0.05
USP46-204ENST00000503060 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
USP46-204ENST00000503060 NSD3Q9BZ95 1437 aa15.38■□□□□ 0.05
USP46-204ENST00000503060 YTHDC2Q9H6S0 1430 aaKnown RBP15.37■□□□□ 0.05
USP46-204ENST00000503060 WDR43Q15061 677 aaKnown RBP eCLIP15.37■□□□□ 0.05
USP46-204ENST00000503060 ESF1Q9H501 851 aaKnown RBP15.37■□□□□ 0.05
USP46-204ENST00000503060 PPP4R2Q9NY27 417 aa15.37■□□□□ 0.05
USP46-204ENST00000503060 PTPRMP28827 1452 aa15.37■□□□□ 0.05
USP46-204ENST00000503060 ZMYM3Q14202 1370 aa15.36■□□□□ 0.05
USP46-204ENST00000503060 RIMS2Q9UQ26 1411 aa15.36■□□□□ 0.05
USP46-204ENST00000503060 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
USP46-204ENST00000503060 USP32Q8NFA0 1604 aa15.35■□□□□ 0.05
USP46-204ENST00000503060 SAFB2Q14151 953 aaKnown RBP eCLIP15.35■□□□□ 0.05
USP46-204ENST00000503060 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
USP46-204ENST00000503060 CABP2Q9NPB3 220 aa15.33■□□□□ 0.04
USP46-204ENST00000503060 ANKRD36BQ8N2N9 1353 aa15.33■□□□□ 0.04
USP46-204ENST00000503060 PRAM1Q96QH2 718 aa15.33■□□□□ 0.04
USP46-204ENST00000503060 POGKQ9P215 609 aa15.32■□□□□ 0.04
USP46-204ENST00000503060 MORC1Q86VD1 984 aa15.31■□□□□ 0.04
USP46-204ENST00000503060 CDCA7LQ96GN5 454 aa15.31■□□□□ 0.04
USP46-204ENST00000503060 CGNL1Q0VF96 1302 aa15.3■□□□□ 0.04
USP46-204ENST00000503060 NINLQ9Y2I6 1382 aa15.3■□□□□ 0.04
USP46-204ENST00000503060 HMGB1P09429 215 aaKnown RBP15.3■□□□□ 0.04
USP46-204ENST00000503060 SETD1AO15047 1707 aaKnown RBP15.3■□□□□ 0.04
USP46-204ENST00000503060 MINK1Q8N4C8 1332 aaPredicted RBP15.3■□□□□ 0.04
USP46-204ENST00000503060 IGSF3O75054 1194 aa15.29■□□□□ 0.04
USP46-204ENST00000503060 POLR3AO14802 1390 aaPredicted RBP15.29■□□□□ 0.04
USP46-204ENST00000503060 TNRQ92752 1358 aa15.29■□□□□ 0.04
USP46-204ENST00000503060 DLC1Q96QB1 1528 aa15.29■□□□□ 0.04
USP46-204ENST00000503060 SRPK2P78362 688 aaKnown RBP15.29■□□□□ 0.04
USP46-204ENST00000503060 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.29■□□□□ 0.04
USP46-204ENST00000503060 NSD2O96028 1365 aa15.28■□□□□ 0.04
USP46-204ENST00000503060 ATAD2Q6PL18 1390 aa15.28■□□□□ 0.04
USP46-204ENST00000503060 RCAN3Q9UKA8 241 aa15.28■□□□□ 0.04
USP46-204ENST00000503060 PLEKHH1Q9ULM0 1364 aa15.27■□□□□ 0.03
USP46-204ENST00000503060 NRXN3Q9Y4C0 1643 aa15.27■□□□□ 0.03
USP46-204ENST00000503060 A0A1W2PP64 1363 aa15.26■□□□□ 0.03
USP46-204ENST00000503060 RRP1P56182 461 aaKnown RBP15.26■□□□□ 0.03
USP46-204ENST00000503060 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
USP46-204ENST00000503060 ABCC11Q96J66 1382 aa15.25■□□□□ 0.03
USP46-204ENST00000503060 ZNF521Q96K83 1311 aa15.25■□□□□ 0.03
USP46-204ENST00000503060 TNNT2P45379 298 aaPredicted RBP15.24■□□□□ 0.03
USP46-204ENST00000503060 HDGFP51858 240 aaKnown RBP15.24■□□□□ 0.03
USP46-204ENST00000503060 CCDC146Q8IYE0 955 aa15.24■□□□□ 0.03
USP46-204ENST00000503060 CDK19Q9BWU1 502 aa15.24■□□□□ 0.03
USP46-204ENST00000503060 UBR1Q8IWV7 1749 aa15.23■□□□□ 0.03
USP46-204ENST00000503060 SHPRHQ149N8 1683 aa15.23■□□□□ 0.03
USP46-204ENST00000503060 TERF2IPQ9NYB0 399 aa15.23■□□□□ 0.03
USP46-204ENST00000503060 CD163L1Q9NR16 1453 aa15.23■□□□□ 0.03
USP46-204ENST00000503060 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
USP46-204ENST00000503060 METP08581 1390 aa15.22■□□□□ 0.03
USP46-204ENST00000503060 TMEM2Q9UHN6 1383 aa15.22■□□□□ 0.03
USP46-204ENST00000503060 APAF1O14727 1248 aa15.22■□□□□ 0.03
USP46-204ENST00000503060 MTHFSP49914 203 aa15.21■□□□□ 0.02
USP46-204ENST00000503060 GOLGA2Q08379 1002 aa15.21■□□□□ 0.02
USP46-204ENST00000503060 NGEFQ8N5V2 710 aa15.19■□□□□ 0.02
USP46-204ENST00000503060 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
USP46-204ENST00000503060 DUSP27Q5VZP5 1158 aa15.19■□□□□ 0.02
USP46-204ENST00000503060 HDGFL2Q7Z4V5 671 aaPredicted RBP15.19■□□□□ 0.02
USP46-204ENST00000503060 NLRP1Q9C000 1473 aa15.19■□□□□ 0.02
USP46-204ENST00000503060 KNDC1Q76NI1 1749 aa15.19■□□□□ 0.02
USP46-204ENST00000503060 MED14O60244 1454 aa15.18■□□□□ 0.02
USP46-204ENST00000503060 CABP1Q9NZU7 370 aa15.18■□□□□ 0.02
USP46-204ENST00000503060 TECPR2O15040 1411 aa15.18■□□□□ 0.02
USP46-204ENST00000503060 ANKRD26Q9UPS8 1709 aa15.18■□□□□ 0.02
USP46-204ENST00000503060 SLFN5Q08AF3 891 aa15.17■□□□□ 0.02
USP46-204ENST00000503060 SIRT1Q96EB6 747 aa15.17■□□□□ 0.02
USP46-204ENST00000503060 FAM135BQ49AJ0 1406 aa15.17■□□□□ 0.02
USP46-204ENST00000503060 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
USP46-204ENST00000503060 GGNBP2Q9H3C7 697 aa15.17■□□□□ 0.02
USP46-204ENST00000503060 BCCIPQ9P287 314 aaKnown RBP eCLIP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms