RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 CABLES1Q8TDN4 633 aa7.82□□□□□ -1.16
HTT-202ENST00000502820 METP08581 1390 aa7.82□□□□□ -1.16
HTT-202ENST00000502820 LRP5O75197 1615 aa7.81□□□□□ -1.16
HTT-202ENST00000502820 C1orf167Q5SNV9 1468 aa7.81□□□□□ -1.16
HTT-202ENST00000502820 CHD2O14647 1828 aaKnown RBP7.81□□□□□ -1.16
HTT-202ENST00000502820 C1QTNF8P60827 252 aa7.81□□□□□ -1.16
HTT-202ENST00000502820 ANKRD30AQ9BXX3 1397 aa7.81□□□□□ -1.16
HTT-202ENST00000502820 NPHP3Q7Z494 1330 aa7.8□□□□□ -1.16
HTT-202ENST00000502820 TRPM2O94759 1503 aa7.8□□□□□ -1.16
HTT-202ENST00000502820 TRIM37O94972 964 aa7.8□□□□□ -1.16
HTT-202ENST00000502820 APBA3O96018 575 aa7.8□□□□□ -1.16
HTT-202ENST00000502820 FAM50AQ14320 339 aaKnown RBP7.8□□□□□ -1.16
HTT-202ENST00000502820 NBPF8Q3BBV2 869 aa7.8□□□□□ -1.16
HTT-202ENST00000502820 NBPF14Q5TI25 921 aa7.8□□□□□ -1.16
HTT-202ENST00000502820 ABCC5O15440 1437 aa7.79□□□□□ -1.16
HTT-202ENST00000502820 VPS72Q15906 364 aa7.79□□□□□ -1.16
HTT-202ENST00000502820 SPON1Q9HCB6 807 aa7.79□□□□□ -1.16
HTT-202ENST00000502820 NHSL1Q5SYE7 1610 aa7.78□□□□□ -1.16
HTT-202ENST00000502820 APLP2Q06481 763 aa7.77□□□□□ -1.17
HTT-202ENST00000502820 STK26Q9P289 416 aa7.77□□□□□ -1.17
HTT-202ENST00000502820 RPRD2Q5VT52 1461 aaKnown RBP7.76□□□□□ -1.17
HTT-202ENST00000502820 KCNQ2O43526 872 aa7.76□□□□□ -1.17
HTT-202ENST00000502820 KRT28Q7Z3Y7 464 aa7.76□□□□□ -1.17
HTT-202ENST00000502820 LMTK2Q8IWU2 1503 aa7.76□□□□□ -1.17
HTT-202ENST00000502820 DAPK1P53355 1430 aa7.76□□□□□ -1.17
HTT-202ENST00000502820 MYOM2P54296 1465 aa7.75□□□□□ -1.17
HTT-202ENST00000502820 LRPPRCP42704 1394 aaKnown RBP7.75□□□□□ -1.17
HTT-202ENST00000502820 GIGYF1O75420 1035 aaPredicted RBP7.75□□□□□ -1.17
HTT-202ENST00000502820 BTG4Q9NY30 223 aa7.75□□□□□ -1.17
HTT-202ENST00000502820 USP35Q9P2H5 1018 aa7.75□□□□□ -1.17
HTT-202ENST00000502820 GLI3P10071 1580 aa7.75□□□□□ -1.17
HTT-202ENST00000502820 TMEM131LA2VDJ0 1609 aa7.74□□□□□ -1.17
HTT-202ENST00000502820 GCC2Q8IWJ2 1684 aa7.74□□□□□ -1.17
HTT-202ENST00000502820 FAM83GA6ND36 823 aa7.74□□□□□ -1.17
HTT-202ENST00000502820 ITGAEP38570 1179 aa7.74□□□□□ -1.17
HTT-202ENST00000502820 ROBO2Q9HCK4 1378 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 UNC13BO14795 1591 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 ONECUT3O60422 494 aaPredicted RBP7.73□□□□□ -1.17
HTT-202ENST00000502820 CAPN15O75808 1086 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 ZBTB7AO95365 584 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 PSME1Q06323 249 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 KLHL34Q8N239 644 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 CAMKK2Q96RR4 588 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 STRN4Q9NRL3 753 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 ATF5Q9Y2D1 282 aaPredicted RBP7.73□□□□□ -1.17
HTT-202ENST00000502820 SPATA31A3Q5VYP0 1347 aa7.73□□□□□ -1.17
HTT-202ENST00000502820 ANKRD50Q9ULJ7 1429 aa7.72□□□□□ -1.17
HTT-202ENST00000502820 PTPN23Q9H3S7 1636 aa7.72□□□□□ -1.17
HTT-202ENST00000502820 PDE3BQ13370 1112 aa7.72□□□□□ -1.17
HTT-202ENST00000502820 WAPLQ7Z5K2 1190 aa7.72□□□□□ -1.17
HTT-202ENST00000502820 SLIT2O94813 1529 aa7.72□□□□□ -1.17
HTT-202ENST00000502820 FAM196AQ6ZSG2 479 aa7.71□□□□□ -1.18
HTT-202ENST00000502820 NUP155O75694 1391 aa7.71□□□□□ -1.18
HTT-202ENST00000502820 TRIM26Q12899 539 aaPredicted RBP7.7□□□□□ -1.18
HTT-202ENST00000502820 GPR162Q16538 588 aa7.7□□□□□ -1.18
HTT-202ENST00000502820 PMFBP1Q8TBY8 1022 aa7.7□□□□□ -1.18
HTT-202ENST00000502820 MYO5BQ9ULV0 1848 aa7.7□□□□□ -1.18
HTT-202ENST00000502820 NINLQ9Y2I6 1382 aa7.7□□□□□ -1.18
HTT-202ENST00000502820 CROCC2H7BZ55 1655 aa7.7□□□□□ -1.18
HTT-202ENST00000502820 ADGRL2O95490 1459 aa7.69□□□□□ -1.18
HTT-202ENST00000502820 PAK3O75914 559 aaPredicted RBP7.69□□□□□ -1.18
HTT-202ENST00000502820 EVA1CP58658 441 aa7.69□□□□□ -1.18
HTT-202ENST00000502820 PCGF6Q9BYE7 350 aa7.69□□□□□ -1.18
HTT-202ENST00000502820 FHDC1Q9C0D6 1143 aaPredicted RBP7.69□□□□□ -1.18
HTT-202ENST00000502820 BCL11BQ9C0K0 894 aaPredicted RBP7.69□□□□□ -1.18
HTT-202ENST00000502820 NALCNQ8IZF0 1738 aa7.69□□□□□ -1.18
HTT-202ENST00000502820 PXDNQ92626 1479 aa7.68□□□□□ -1.18
HTT-202ENST00000502820 VGFO15240 615 aaPredicted RBP7.68□□□□□ -1.18
HTT-202ENST00000502820 SAFB2Q14151 953 aaKnown RBP eCLIP7.68□□□□□ -1.18
HTT-202ENST00000502820 PDGFDQ9GZP0 370 aaPredicted RBP7.68□□□□□ -1.18
HTT-202ENST00000502820 BRWD3Q6RI45 1802 aa7.68□□□□□ -1.18
HTT-202ENST00000502820 XRN1Q8IZH2 1706 aaKnown RBP7.67□□□□□ -1.18
HTT-202ENST00000502820 CHRNA2Q15822 529 aa7.67□□□□□ -1.18
HTT-202ENST00000502820 SYT17Q9BSW7 474 aa7.67□□□□□ -1.18
HTT-202ENST00000502820 PRDM11Q9NQV5 511 aa7.67□□□□□ -1.18
HTT-202ENST00000502820 PHF8Q9UPP1 1060 aa7.67□□□□□ -1.18
HTT-202ENST00000502820 COL22A1Q8NFW1 1626 aaPredicted RBP7.67□□□□□ -1.18
HTT-202ENST00000502820 TMEM132EQ6IEE7 984 aa7.66□□□□□ -1.18
HTT-202ENST00000502820 SPATA31A5Q5VU36 1347 aa7.66□□□□□ -1.18
HTT-202ENST00000502820 SPATA31A7Q8IWB4 1347 aa7.66□□□□□ -1.18
HTT-202ENST00000502820 ZBTB7CA1YPR0 619 aa7.65□□□□□ -1.18
HTT-202ENST00000502820 HFM1A2PYH4 1435 aa7.65□□□□□ -1.18
HTT-202ENST00000502820 CCDC144AA2RUR9 1427 aa7.65□□□□□ -1.18
HTT-202ENST00000502820 NAIPQ13075 1403 aa7.65□□□□□ -1.18
HTT-202ENST00000502820 ZNF526Q8TF50 670 aaPredicted RBP7.65□□□□□ -1.18
HTT-202ENST00000502820 CAMTA1Q9Y6Y1 1673 aa7.65□□□□□ -1.18
HTT-202ENST00000502820 TNS3Q68CZ2 1445 aa7.64□□□□□ -1.19
HTT-202ENST00000502820 ZC3H6P61129 1189 aaKnown RBP7.64□□□□□ -1.19
HTT-202ENST00000502820 USP32Q8NFA0 1604 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 NRXN3Q9Y4C0 1643 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 DISP2A7MBM2 1401 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 ARHGEF10O15013 1369 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 ROCK1Q13464 1354 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 PARD3Q8TEW0 1356 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 RGL3Q3MIN7 710 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 NUTM2GQ5VZR2 741 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 ANO8Q9HCE9 1232 aaPredicted RBP7.63□□□□□ -1.19
HTT-202ENST00000502820 SPHKAPQ2M3C7 1700 aa7.63□□□□□ -1.19
HTT-202ENST00000502820 PLEKHH1Q9ULM0 1364 aa7.62□□□□□ -1.19
HTT-202ENST00000502820 STK32BQ9NY57 414 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms