RNA–Protein interactions for RNA: ENST00000502478.1

CCSER1-202, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 744 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-202ENST00000502478 CLCN1P35523 988 aa11.54□□□□□ -0.56
CCSER1-202ENST00000502478 FOXC1Q12948 553 aa11.54□□□□□ -0.56
CCSER1-202ENST00000502478 MMP16P51512 607 aa11.53□□□□□ -0.56
CCSER1-202ENST00000502478 FAM217BQ9NTX9 383 aaPredicted RBP11.53□□□□□ -0.56
CCSER1-202ENST00000502478 HOXA2O43364 376 aa11.52□□□□□ -0.57
CCSER1-202ENST00000502478 HLA-CQ95604 372 aa11.52□□□□□ -0.57
CCSER1-202ENST00000502478 USB1Q9BQ65 265 aaKnown RBP11.51□□□□□ -0.57
CCSER1-202ENST00000502478 DXOO77932 396 aaKnown RBP11.5□□□□□ -0.57
CCSER1-202ENST00000502478 TOR4AQ9NXH8 423 aa11.49□□□□□ -0.57
CCSER1-202ENST00000502478 ZBTB24O43167 697 aaPredicted RBP11.48□□□□□ -0.57
CCSER1-202ENST00000502478 KRI1Q8N9T8 703 aaKnown RBP11.46□□□□□ -0.57
CCSER1-202ENST00000502478 REPIN1Q9BWE0 567 aaKnown RBP11.46□□□□□ -0.57
CCSER1-202ENST00000502478 GUCA2AQ02747 115 aa11.45□□□□□ -0.58
CCSER1-202ENST00000502478 TRIM32Q13049 653 aa11.45□□□□□ -0.58
CCSER1-202ENST00000502478 BARGINQ6ZT62 677 aa11.45□□□□□ -0.58
CCSER1-202ENST00000502478 ZMYND10O75800 440 aa11.44□□□□□ -0.58
CCSER1-202ENST00000502478 CYP4X1Q8N118 509 aa11.44□□□□□ -0.58
CCSER1-202ENST00000502478 AAASQ9NRG9 546 aa11.44□□□□□ -0.58
CCSER1-202ENST00000502478 ST8SIA5O15466 376 aa11.43□□□□□ -0.58
CCSER1-202ENST00000502478 NUTM1Q86Y26 1132 aa11.43□□□□□ -0.58
CCSER1-202ENST00000502478 CRIPAKQ8N1N5 446 aa11.43□□□□□ -0.58
CCSER1-202ENST00000502478 WNT7AO00755 349 aa11.42□□□□□ -0.58
CCSER1-202ENST00000502478 AVPP01185 164 aa11.42□□□□□ -0.58
CCSER1-202ENST00000502478 POTECB2RU33 542 aa11.41□□□□□ -0.58
CCSER1-202ENST00000502478 JUNDP17535 347 aa11.4□□□□□ -0.58
CCSER1-202ENST00000502478 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
CCSER1-202ENST00000502478 ZNF775Q96BV0 537 aaPredicted RBP11.4□□□□□ -0.58
CCSER1-202ENST00000502478 SSTR3P32745 418 aaPredicted RBP11.39□□□□□ -0.59
CCSER1-202ENST00000502478 AMHR2Q16671 573 aa11.39□□□□□ -0.59
CCSER1-202ENST00000502478 RETREG3Q86VR2 466 aa11.39□□□□□ -0.59
CCSER1-202ENST00000502478 SYMPKQ92797 1274 aaKnown RBP11.39□□□□□ -0.59
CCSER1-202ENST00000502478 TTC24A2A3L6 582 aaPredicted RBP11.37□□□□□ -0.59
CCSER1-202ENST00000502478 FDX1P10109 184 aa11.37□□□□□ -0.59
CCSER1-202ENST00000502478 TTLL12Q14166 644 aaPredicted RBP11.37□□□□□ -0.59
CCSER1-202ENST00000502478 CCDC24Q8N4L8 307 aa11.37□□□□□ -0.59
CCSER1-202ENST00000502478 PCDHGC3Q9UN70 934 aa11.37□□□□□ -0.59
CCSER1-202ENST00000502478 SMCPP49901 116 aaPredicted RBP11.36□□□□□ -0.59
CCSER1-202ENST00000502478 CTC1Q2NKJ3 1217 aa11.36□□□□□ -0.59
CCSER1-202ENST00000502478 SNIP1Q8TAD8 396 aaKnown RBP11.36□□□□□ -0.59
CCSER1-202ENST00000502478 SPIRE2Q8WWL2 714 aa11.36□□□□□ -0.59
CCSER1-202ENST00000502478 MRGPRX2Q96LB1 330 aa11.36□□□□□ -0.59
CCSER1-202ENST00000502478 SMPD1P17405 629 aa11.34□□□□□ -0.59
CCSER1-202ENST00000502478 WNT7BP56706 349 aa11.34□□□□□ -0.59
CCSER1-202ENST00000502478 GIGYF2Q6Y7W6 1299 aaKnown RBP11.34□□□□□ -0.59
CCSER1-202ENST00000502478 AXIN1O15169 862 aa11.33□□□□□ -0.6
CCSER1-202ENST00000502478 SKOR1P84550 965 aa11.33□□□□□ -0.6
CCSER1-202ENST00000502478 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
CCSER1-202ENST00000502478 NUDT12Q9BQG2 462 aa11.32□□□□□ -0.6
CCSER1-202ENST00000502478 DACH1Q9UI36 760 aa11.32□□□□□ -0.6
CCSER1-202ENST00000502478 RC3H1Q5TC82 1133 aaKnown RBP11.31□□□□□ -0.6
CCSER1-202ENST00000502478 MOXD2PA6NHM9 499 aa11.3□□□□□ -0.6
CCSER1-202ENST00000502478 NDUFV2P19404 249 aa11.3□□□□□ -0.6
CCSER1-202ENST00000502478 J3QL48 77 aa11.29□□□□□ -0.6
CCSER1-202ENST00000502478 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
CCSER1-202ENST00000502478 MS4A1P11836 297 aa11.28□□□□□ -0.6
CCSER1-202ENST00000502478 BEGAINQ9BUH8 593 aa11.28□□□□□ -0.6
CCSER1-202ENST00000502478 CCNYL3P0C7X3 344 aa11.27□□□□□ -0.61
CCSER1-202ENST00000502478 PARP9Q8IXQ6 854 aa11.27□□□□□ -0.61
CCSER1-202ENST00000502478 GMPR2Q9P2T1 348 aaKnown RBP11.27□□□□□ -0.61
CCSER1-202ENST00000502478 PTPRNQ16849 979 aa11.26□□□□□ -0.61
CCSER1-202ENST00000502478 TRIM66O15016 1216 aa11.25□□□□□ -0.61
CCSER1-202ENST00000502478 GJA5P36382 358 aa11.25□□□□□ -0.61
CCSER1-202ENST00000502478 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
CCSER1-202ENST00000502478 MTMR2Q13614 643 aa11.24□□□□□ -0.61
CCSER1-202ENST00000502478 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
CCSER1-202ENST00000502478 TBC1D2Q9BYX2 928 aa11.24□□□□□ -0.61
CCSER1-202ENST00000502478 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
CCSER1-202ENST00000502478 DESI1Q6ICB0 168 aa11.23□□□□□ -0.61
CCSER1-202ENST00000502478 HPS1Q92902 700 aa11.23□□□□□ -0.61
CCSER1-202ENST00000502478 AK7Q96M32 723 aa11.23□□□□□ -0.61
CCSER1-202ENST00000502478 RSBN1LQ6PCB5 846 aaPredicted RBP11.22□□□□□ -0.61
CCSER1-202ENST00000502478 EVA1BQ9NVM1 165 aa11.22□□□□□ -0.61
CCSER1-202ENST00000502478 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
CCSER1-202ENST00000502478 SIAH2O43255 324 aa11.21□□□□□ -0.61
CCSER1-202ENST00000502478 ATP13A2Q9NQ11 1180 aa11.21□□□□□ -0.61
CCSER1-202ENST00000502478 SH3BP2P78314 561 aa11.2□□□□□ -0.62
CCSER1-202ENST00000502478 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
CCSER1-202ENST00000502478 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
CCSER1-202ENST00000502478 ALDH1A1P00352 501 aa11.19□□□□□ -0.62
CCSER1-202ENST00000502478 KCNH2Q12809 1159 aa11.19□□□□□ -0.62
CCSER1-202ENST00000502478 LCE2AQ5TA79 106 aaPredicted RBP11.19□□□□□ -0.62
CCSER1-202ENST00000502478 TREML4Q6UXN2 200 aa11.19□□□□□ -0.62
CCSER1-202ENST00000502478 SPTLC1O15269 473 aa11.18□□□□□ -0.62
CCSER1-202ENST00000502478 PCDHB15Q9Y5E8 787 aa11.17□□□□□ -0.62
CCSER1-202ENST00000502478 CFAP99D6REC4 459 aa11.14□□□□□ -0.63
CCSER1-202ENST00000502478 LINC01559Q495D7 138 aa11.14□□□□□ -0.63
CCSER1-202ENST00000502478 LYPD8Q6UX82 237 aa11.14□□□□□ -0.63
CCSER1-202ENST00000502478 ZNF511Q8NB15 262 aa11.14□□□□□ -0.63
CCSER1-202ENST00000502478 BAP1Q92560 729 aa11.14□□□□□ -0.63
CCSER1-202ENST00000502478 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
CCSER1-202ENST00000502478 ZBTB3Q9H5J0 574 aa11.14□□□□□ -0.63
CCSER1-202ENST00000502478 SENP2Q9HC62 589 aa11.14□□□□□ -0.63
CCSER1-202ENST00000502478 HRCP23327 699 aa11.13□□□□□ -0.63
CCSER1-202ENST00000502478 PDE4DQ08499 809 aa11.13□□□□□ -0.63
CCSER1-202ENST00000502478 PRPF38BQ5VTL8 546 aaKnown RBP11.13□□□□□ -0.63
CCSER1-202ENST00000502478 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
CCSER1-202ENST00000502478 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
CCSER1-202ENST00000502478 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
CCSER1-202ENST00000502478 VARSP26640 1264 aaKnown RBP11.1□□□□□ -0.63
CCSER1-202ENST00000502478 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms