RNA–Protein interactions for RNA: ENST00000502404.5

UBE2D3-211, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-211ENST00000502404 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
UBE2D3-211ENST00000502404 NAIPQ13075 1403 aa16.71■□□□□ 0.27
UBE2D3-211ENST00000502404 COL16A1Q07092 1604 aaPredicted RBP16.71■□□□□ 0.27
UBE2D3-211ENST00000502404 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
UBE2D3-211ENST00000502404 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.27
UBE2D3-211ENST00000502404 METP08581 1390 aa16.71■□□□□ 0.27
UBE2D3-211ENST00000502404 RPGRIP1LQ68CZ1 1315 aa16.7■□□□□ 0.26
UBE2D3-211ENST00000502404 NUTM2BA6NNL0 878 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-211ENST00000502404 NUTM2EB1AL46 878 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-211ENST00000502404 NUTM2AQ8IVF1 878 aaPredicted RBP16.68■□□□□ 0.26
UBE2D3-211ENST00000502404 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
UBE2D3-211ENST00000502404 XRN1Q8IZH2 1706 aaKnown RBP16.67■□□□□ 0.26
UBE2D3-211ENST00000502404 HFM1A2PYH4 1435 aa16.66■□□□□ 0.26
UBE2D3-211ENST00000502404 RXRBP28702 533 aa16.66■□□□□ 0.26
UBE2D3-211ENST00000502404 MST1RQ04912 1400 aa16.66■□□□□ 0.26
UBE2D3-211ENST00000502404 SETD5Q9C0A6 1442 aa16.66■□□□□ 0.26
UBE2D3-211ENST00000502404 ADGRL3Q9HAR2 1447 aa16.66■□□□□ 0.26
UBE2D3-211ENST00000502404 NRXN3Q9Y4C0 1643 aa16.66■□□□□ 0.26
UBE2D3-211ENST00000502404 NEXMIFQ5QGS0 1516 aa16.65■□□□□ 0.26
UBE2D3-211ENST00000502404 CLTCL1P53675 1640 aa16.65■□□□□ 0.26
UBE2D3-211ENST00000502404 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
UBE2D3-211ENST00000502404 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
UBE2D3-211ENST00000502404 LRP6O75581 1613 aa16.64■□□□□ 0.25
UBE2D3-211ENST00000502404 KIF1BO60333 1816 aa16.64■□□□□ 0.25
UBE2D3-211ENST00000502404 IFNLR1Q8IU57 520 aaPredicted RBP16.64■□□□□ 0.25
UBE2D3-211ENST00000502404 ACIN1Q9UKV3 1341 aaKnown RBP16.62■□□□□ 0.25
UBE2D3-211ENST00000502404 PTCH1Q13635 1447 aa16.61■□□□□ 0.25
UBE2D3-211ENST00000502404 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
UBE2D3-211ENST00000502404 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
UBE2D3-211ENST00000502404 AFF2P51816 1311 aa16.6■□□□□ 0.25
UBE2D3-211ENST00000502404 C1orf167Q5SNV9 1468 aa16.59■□□□□ 0.25
UBE2D3-211ENST00000502404 MIER1Q8N108 512 aa16.58■□□□□ 0.24
UBE2D3-211ENST00000502404 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
UBE2D3-211ENST00000502404 PNPLA6Q8IY17 1366 aa16.57■□□□□ 0.24
UBE2D3-211ENST00000502404 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
UBE2D3-211ENST00000502404 DDX17Q92841 729 aaKnown RBP16.57■□□□□ 0.24
UBE2D3-211ENST00000502404 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
UBE2D3-211ENST00000502404 UPF1Q92900 1129 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBE2D3-211ENST00000502404 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
UBE2D3-211ENST00000502404 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
UBE2D3-211ENST00000502404 NHSL1Q5SYE7 1610 aa16.56■□□□□ 0.24
UBE2D3-211ENST00000502404 CDK12Q9NYV4 1490 aaPredicted RBP16.55■□□□□ 0.24
UBE2D3-211ENST00000502404 CCDC144AA2RUR9 1427 aa16.55■□□□□ 0.24
UBE2D3-211ENST00000502404 PRAG1Q86YV5 1406 aa16.55■□□□□ 0.24
UBE2D3-211ENST00000502404 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
UBE2D3-211ENST00000502404 ORAI2Q96SN7 254 aa16.55■□□□□ 0.24
UBE2D3-211ENST00000502404 ANKRD30BQ9BXX2 1392 aa16.54■□□□□ 0.24
UBE2D3-211ENST00000502404 SOS2Q07890 1332 aaPredicted RBP16.54■□□□□ 0.24
UBE2D3-211ENST00000502404 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
UBE2D3-211ENST00000502404 MPHOSPH9Q99550 1183 aa16.54■□□□□ 0.24
UBE2D3-211ENST00000502404 ADAMTS2O95450 1211 aa16.53■□□□□ 0.24
UBE2D3-211ENST00000502404 NALCNQ8IZF0 1738 aa16.53■□□□□ 0.24
UBE2D3-211ENST00000502404 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
UBE2D3-211ENST00000502404 ESCO1Q5FWF5 840 aa16.52■□□□□ 0.24
UBE2D3-211ENST00000502404 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-211ENST00000502404 SETD1AO15047 1707 aaKnown RBP16.51■□□□□ 0.23
UBE2D3-211ENST00000502404 STK26Q9P289 416 aa16.51■□□□□ 0.23
UBE2D3-211ENST00000502404 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
UBE2D3-211ENST00000502404 PLEKHG5O94827 1062 aa16.5■□□□□ 0.23
UBE2D3-211ENST00000502404 RTN4Q9NQC3 1192 aaKnown RBP16.49■□□□□ 0.23
UBE2D3-211ENST00000502404 USP21Q9UK80 565 aa16.49■□□□□ 0.23
UBE2D3-211ENST00000502404 TRPC5Q9UL62 973 aaPredicted RBP16.49■□□□□ 0.23
UBE2D3-211ENST00000502404 PPLO60437 1756 aa16.49■□□□□ 0.23
UBE2D3-211ENST00000502404 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
UBE2D3-211ENST00000502404 LAMC1P11047 1609 aa16.47■□□□□ 0.23
UBE2D3-211ENST00000502404 ABCC11Q96J66 1382 aa16.47■□□□□ 0.23
UBE2D3-211ENST00000502404 FOXO3O43524 673 aa16.46■□□□□ 0.23
UBE2D3-211ENST00000502404 WAPLQ7Z5K2 1190 aa16.46■□□□□ 0.23
UBE2D3-211ENST00000502404 FNBP4Q8N3X1 1017 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-211ENST00000502404 SIRT1Q96EB6 747 aa16.46■□□□□ 0.23
UBE2D3-211ENST00000502404 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
UBE2D3-211ENST00000502404 SPATA31E1Q6ZUB1 1445 aa16.45■□□□□ 0.22
UBE2D3-211ENST00000502404 KLHL34Q8N239 644 aa16.45■□□□□ 0.22
UBE2D3-211ENST00000502404 TECPR2O15040 1411 aa16.45■□□□□ 0.22
UBE2D3-211ENST00000502404 CDC42BPGQ6DT37 1551 aa16.44■□□□□ 0.22
UBE2D3-211ENST00000502404 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
UBE2D3-211ENST00000502404 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
UBE2D3-211ENST00000502404 DHX57Q6P158 1386 aaKnown RBP16.42■□□□□ 0.22
UBE2D3-211ENST00000502404 NUTM2FA1L443 756 aa16.42■□□□□ 0.22
UBE2D3-211ENST00000502404 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
UBE2D3-211ENST00000502404 SPOCK2Q92563 424 aa16.41■□□□□ 0.22
UBE2D3-211ENST00000502404 C14orf93Q9H972 538 aaKnown RBP16.41■□□□□ 0.22
UBE2D3-211ENST00000502404 RGS12O14924 1447 aa16.41■□□□□ 0.22
UBE2D3-211ENST00000502404 PIK3C2GO75747 1445 aa16.4■□□□□ 0.22
UBE2D3-211ENST00000502404 YTHDC2Q9H6S0 1430 aaKnown RBP16.4■□□□□ 0.22
UBE2D3-211ENST00000502404 XPCQ01831 940 aaPredicted RBP16.4■□□□□ 0.22
UBE2D3-211ENST00000502404 PSME1Q06323 249 aa16.4■□□□□ 0.22
UBE2D3-211ENST00000502404 MYOM2P54296 1465 aa16.38■□□□□ 0.21
UBE2D3-211ENST00000502404 PXDNQ92626 1479 aa16.38■□□□□ 0.21
UBE2D3-211ENST00000502404 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBE2D3-211ENST00000502404 KRT28Q7Z3Y7 464 aa16.38■□□□□ 0.21
UBE2D3-211ENST00000502404 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-211ENST00000502404 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
UBE2D3-211ENST00000502404 PLEKHH1Q9ULM0 1364 aa16.37■□□□□ 0.21
UBE2D3-211ENST00000502404 ATRNO75882 1429 aa16.36■□□□□ 0.21
UBE2D3-211ENST00000502404 MNX1P50219 401 aaPredicted RBP16.36■□□□□ 0.21
UBE2D3-211ENST00000502404 CFAP70Q5T0N1 1121 aa16.36■□□□□ 0.21
UBE2D3-211ENST00000502404 CCDC125Q86Z20 511 aa16.36■□□□□ 0.21
UBE2D3-211ENST00000502404 POGKQ9P215 609 aa16.36■□□□□ 0.21
UBE2D3-211ENST00000502404 PHF8Q9UPP1 1060 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms