RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 GGCXP38435 758 aa5.78□□□□□ -1.48
SMAD1-203ENST00000502342 RIC3Q7Z5B4 369 aa5.78□□□□□ -1.48
SMAD1-203ENST00000502342 IL27Q8NEV9 243 aa5.78□□□□□ -1.48
SMAD1-203ENST00000502342 RNF223E7ERA6 249 aa5.77□□□□□ -1.49
SMAD1-203ENST00000502342 Q3C1V9 767 aa5.77□□□□□ -1.49
SMAD1-203ENST00000502342 PRDM9Q9NQV7 894 aa5.77□□□□□ -1.49
SMAD1-203ENST00000502342 BRPF1P55201 1214 aaPredicted RBP5.76□□□□□ -1.49
SMAD1-203ENST00000502342 USB1Q9BQ65 265 aaKnown RBP5.76□□□□□ -1.49
SMAD1-203ENST00000502342 PRKD2Q9BZL6 878 aa5.76□□□□□ -1.49
SMAD1-203ENST00000502342 SALL2Q9Y467 1007 aaPredicted RBP5.76□□□□□ -1.49
SMAD1-203ENST00000502342 DIXDC1Q155Q3 683 aa5.75□□□□□ -1.49
SMAD1-203ENST00000502342 MYSM1Q5VVJ2 828 aa5.75□□□□□ -1.49
SMAD1-203ENST00000502342 RSBN1LQ6PCB5 846 aaPredicted RBP5.75□□□□□ -1.49
SMAD1-203ENST00000502342 CABLES1Q8TDN4 633 aa5.75□□□□□ -1.49
SMAD1-203ENST00000502342 LIMD1Q9UGP4 676 aa5.75□□□□□ -1.49
SMAD1-203ENST00000502342 PLEKHG3A1L390 1219 aa5.74□□□□□ -1.49
SMAD1-203ENST00000502342 SPTLC1O15269 473 aa5.74□□□□□ -1.49
SMAD1-203ENST00000502342 CCDC24Q8N4L8 307 aa5.74□□□□□ -1.49
SMAD1-203ENST00000502342 PROCA1Q8NCQ7 364 aaPredicted RBP5.74□□□□□ -1.49
SMAD1-203ENST00000502342 NUTM2BA6NNL0 878 aaPredicted RBP5.73□□□□□ -1.49
SMAD1-203ENST00000502342 NUTM2EB1AL46 878 aaPredicted RBP5.73□□□□□ -1.49
SMAD1-203ENST00000502342 PLA2G2CQ5R387 149 aa5.73□□□□□ -1.49
SMAD1-203ENST00000502342 NUTM2DQ5VT03 806 aaPredicted RBP5.73□□□□□ -1.49
SMAD1-203ENST00000502342 LIAT1Q6ZQX7 453 aa5.73□□□□□ -1.49
SMAD1-203ENST00000502342 NUTM2AQ8IVF1 878 aaPredicted RBP5.73□□□□□ -1.49
SMAD1-203ENST00000502342 RSPH6AQ9H0K4 717 aa5.73□□□□□ -1.49
SMAD1-203ENST00000502342 FCF1Q9Y324 198 aaKnown RBP5.73□□□□□ -1.49
SMAD1-203ENST00000502342 HRCP23327 699 aa5.72□□□□□ -1.49
SMAD1-203ENST00000502342 SLC19A1P41440 591 aa5.72□□□□□ -1.49
SMAD1-203ENST00000502342 MTMR2Q13614 643 aa5.72□□□□□ -1.49
SMAD1-203ENST00000502342 QPCTQ16769 361 aa5.72□□□□□ -1.49
SMAD1-203ENST00000502342 ANKLE1Q8NAG6 615 aa5.72□□□□□ -1.49
SMAD1-203ENST00000502342 PRR7Q8TB68 274 aa5.72□□□□□ -1.49
SMAD1-203ENST00000502342 TSC1Q92574 1164 aa5.72□□□□□ -1.49
SMAD1-203ENST00000502342 EMID1Q96A84 441 aaPredicted RBP5.72□□□□□ -1.49
SMAD1-203ENST00000502342 DDRGK1Q96HY6 314 aa5.72□□□□□ -1.49
SMAD1-203ENST00000502342 CLK2P49760 499 aaKnown RBP5.71□□□□□ -1.5
SMAD1-203ENST00000502342 MSS51Q4VC12 460 aa5.71□□□□□ -1.5
SMAD1-203ENST00000502342 RTL5Q5HYW3 569 aaPredicted RBP5.71□□□□□ -1.5
SMAD1-203ENST00000502342 RETREG3Q86VR2 466 aa5.71□□□□□ -1.5
SMAD1-203ENST00000502342 SKIV2LQ15477 1246 aaKnown RBP5.7□□□□□ -1.5
SMAD1-203ENST00000502342 ZBTB3Q9H5J0 574 aa5.7□□□□□ -1.5
SMAD1-203ENST00000502342 CFAP99D6REC4 459 aa5.69□□□□□ -1.5
SMAD1-203ENST00000502342 RGS20O76081 388 aa5.69□□□□□ -1.5
SMAD1-203ENST00000502342 DXOO77932 396 aaKnown RBP5.69□□□□□ -1.5
SMAD1-203ENST00000502342 JUNDP17535 347 aa5.69□□□□□ -1.5
SMAD1-203ENST00000502342 MMP16P51512 607 aa5.69□□□□□ -1.5
SMAD1-203ENST00000502342 FBXO31Q5XUX0 539 aaPredicted RBP5.69□□□□□ -1.5
SMAD1-203ENST00000502342 ZBTB24O43167 697 aaPredicted RBP5.68□□□□□ -1.5
SMAD1-203ENST00000502342 LILRB3O75022 631 aa5.68□□□□□ -1.5
SMAD1-203ENST00000502342 GJA5P36382 358 aa5.68□□□□□ -1.5
SMAD1-203ENST00000502342 SPRYD7Q5W111 196 aa5.68□□□□□ -1.5
SMAD1-203ENST00000502342 PTCRAQ6ISU1 281 aaPredicted RBP5.68□□□□□ -1.5
SMAD1-203ENST00000502342 SPDYE5A6NIY4 337 aa5.67□□□□□ -1.5
SMAD1-203ENST00000502342 SH3D19Q5HYK7 790 aa5.67□□□□□ -1.5
SMAD1-203ENST00000502342 PRPF38BQ5VTL8 546 aaKnown RBP5.67□□□□□ -1.5
SMAD1-203ENST00000502342 NUDT12Q9BQG2 462 aa5.67□□□□□ -1.5
SMAD1-203ENST00000502342 V9GY48 417 aaPredicted RBP5.67□□□□□ -1.5
SMAD1-203ENST00000502342 CD2BP2O95400 341 aaKnown RBP5.66□□□□□ -1.5
SMAD1-203ENST00000502342 CTHP32929 405 aa5.66□□□□□ -1.5
SMAD1-203ENST00000502342 FOXC1Q12948 553 aa5.66□□□□□ -1.5
SMAD1-203ENST00000502342 PCMTD1Q96MG8 357 aaPredicted RBP5.66□□□□□ -1.5
SMAD1-203ENST00000502342 PER1O15534 1290 aaPredicted RBP5.65□□□□□ -1.5
SMAD1-203ENST00000502342 GFRA3O60609 400 aa5.65□□□□□ -1.5
SMAD1-203ENST00000502342 CTDSPL2Q05D32 466 aa5.65□□□□□ -1.5
SMAD1-203ENST00000502342 TUSC1Q2TAM9 212 aa5.65□□□□□ -1.5
SMAD1-203ENST00000502342 ZNF697Q5TEC3 545 aa5.65□□□□□ -1.5
SMAD1-203ENST00000502342 ZNF598Q86UK7 904 aaKnown RBP5.65□□□□□ -1.5
SMAD1-203ENST00000502342 IRX2Q9BZI1 471 aaPredicted RBP5.65□□□□□ -1.5
SMAD1-203ENST00000502342 AP1G2O75843 785 aa5.64□□□□□ -1.51
SMAD1-203ENST00000502342 LYPD8Q6UX82 237 aa5.64□□□□□ -1.51
SMAD1-203ENST00000502342 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.64□□□□□ -1.51
SMAD1-203ENST00000502342 EVA1BQ9NVM1 165 aa5.64□□□□□ -1.51
SMAD1-203ENST00000502342 TNFRSF10AO00220 468 aa5.63□□□□□ -1.51
SMAD1-203ENST00000502342 CCNYL3P0C7X3 344 aa5.63□□□□□ -1.51
SMAD1-203ENST00000502342 RPIAP49247 311 aa5.63□□□□□ -1.51
SMAD1-203ENST00000502342 KCNH2Q12809 1159 aa5.63□□□□□ -1.51
SMAD1-203ENST00000502342 PDZRN3Q9UPQ7 1066 aa5.63□□□□□ -1.51
SMAD1-203ENST00000502342 TRIM32Q13049 653 aa5.62□□□□□ -1.51
SMAD1-203ENST00000502342 PTPRNQ16849 979 aa5.62□□□□□ -1.51
SMAD1-203ENST00000502342 LINC01559Q495D7 138 aa5.62□□□□□ -1.51
SMAD1-203ENST00000502342 DESI1Q6ICB0 168 aa5.62□□□□□ -1.51
SMAD1-203ENST00000502342 BAP1Q92560 729 aa5.62□□□□□ -1.51
SMAD1-203ENST00000502342 MAP10Q9P2G4 905 aa5.62□□□□□ -1.51
SMAD1-203ENST00000502342 TRIM67Q6ZTA4 783 aa5.61□□□□□ -1.51
SMAD1-203ENST00000502342 HELBQ8NG08 1087 aaPredicted RBP5.61□□□□□ -1.51
SMAD1-203ENST00000502342 LRRN4Q8WUT4 740 aa5.61□□□□□ -1.51
SMAD1-203ENST00000502342 UNC93B1Q9H1C4 597 aa5.61□□□□□ -1.51
SMAD1-203ENST00000502342 GDF9O60383 454 aa5.6□□□□□ -1.51
SMAD1-203ENST00000502342 RFC5P40937 340 aa5.6□□□□□ -1.51
SMAD1-203ENST00000502342 SKOR1P84550 965 aa5.6□□□□□ -1.51
SMAD1-203ENST00000502342 PPP2R2DQ66LE6 453 aa5.6□□□□□ -1.51
SMAD1-203ENST00000502342 GOPCQ9HD26 462 aa5.6□□□□□ -1.51
SMAD1-203ENST00000502342 PKD2L1Q9P0L9 805 aa5.6□□□□□ -1.51
SMAD1-203ENST00000502342 RC3H1Q5TC82 1133 aaKnown RBP5.59□□□□□ -1.51
SMAD1-203ENST00000502342 F12P00748 615 aaPredicted RBP5.58□□□□□ -1.52
SMAD1-203ENST00000502342 SH3BP2P78314 561 aa5.58□□□□□ -1.52
SMAD1-203ENST00000502342 NR6A1Q15406 480 aa5.58□□□□□ -1.52
SMAD1-203ENST00000502342 Q6ZNB5 142 aa5.58□□□□□ -1.52
SMAD1-203ENST00000502342 MRGPRX2Q96LB1 330 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms