RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 QTRT2Q9H974 415 aaKnown RBP10.71□□□□□ -0.69
SH3RF1-202ENST00000502315 TECPR2O15040 1411 aa10.7□□□□□ -0.7
SH3RF1-202ENST00000502315 ABCC11Q96J66 1382 aa10.7□□□□□ -0.7
SH3RF1-202ENST00000502315 ROBO2Q9HCK4 1378 aa10.7□□□□□ -0.7
SH3RF1-202ENST00000502315 NUTM2BA6NNL0 878 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-202ENST00000502315 NUTM2EB1AL46 878 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-202ENST00000502315 NUTM2AQ8IVF1 878 aaPredicted RBP10.7□□□□□ -0.7
SH3RF1-202ENST00000502315 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
SH3RF1-202ENST00000502315 STAC3Q96MF2 364 aa10.69□□□□□ -0.7
SH3RF1-202ENST00000502315 CCDC144AA2RUR9 1427 aa10.68□□□□□ -0.7
SH3RF1-202ENST00000502315 NALCNQ8IZF0 1738 aa10.68□□□□□ -0.7
SH3RF1-202ENST00000502315 C1QBPQ07021 282 aaKnown RBP10.68□□□□□ -0.7
SH3RF1-202ENST00000502315 CCDC125Q86Z20 511 aa10.68□□□□□ -0.7
SH3RF1-202ENST00000502315 RNF216Q9NWF9 866 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-202ENST00000502315 TRPC5Q9UL62 973 aaPredicted RBP10.68□□□□□ -0.7
SH3RF1-202ENST00000502315 SETD1AO15047 1707 aaKnown RBP10.67□□□□□ -0.7
SH3RF1-202ENST00000502315 C8orf37Q96NL8 207 aa10.67□□□□□ -0.7
SH3RF1-202ENST00000502315 CDC42BPGQ6DT37 1551 aa10.66□□□□□ -0.7
SH3RF1-202ENST00000502315 ORAI2Q96SN7 254 aa10.66□□□□□ -0.7
SH3RF1-202ENST00000502315 MPHOSPH9Q99550 1183 aa10.66□□□□□ -0.7
SH3RF1-202ENST00000502315 PPLO60437 1756 aa10.66□□□□□ -0.7
SH3RF1-202ENST00000502315 SPATA31E1Q6ZUB1 1445 aa10.66□□□□□ -0.7
SH3RF1-202ENST00000502315 COL22A1Q8NFW1 1626 aaPredicted RBP10.66□□□□□ -0.7
SH3RF1-202ENST00000502315 PPARGC1BQ86YN6 1023 aaKnown RBP10.65□□□□□ -0.7
SH3RF1-202ENST00000502315 USP21Q9UK80 565 aa10.65□□□□□ -0.7
SH3RF1-202ENST00000502315 ESCO1Q5FWF5 840 aa10.64□□□□□ -0.71
SH3RF1-202ENST00000502315 ATAD2Q6PL18 1390 aa10.64□□□□□ -0.71
SH3RF1-202ENST00000502315 PSME1Q06323 249 aa10.63□□□□□ -0.71
SH3RF1-202ENST00000502315 DDX17Q92841 729 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-202ENST00000502315 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
SH3RF1-202ENST00000502315 MYOM2P54296 1465 aa10.62□□□□□ -0.71
SH3RF1-202ENST00000502315 ADGRF5Q8IZF2 1346 aa10.62□□□□□ -0.71
SH3RF1-202ENST00000502315 PIK3C2GO75747 1445 aa10.62□□□□□ -0.71
SH3RF1-202ENST00000502315 PXDNQ92626 1479 aa10.61□□□□□ -0.71
SH3RF1-202ENST00000502315 RGS12O14924 1447 aa10.61□□□□□ -0.71
SH3RF1-202ENST00000502315 ATRNO75882 1429 aa10.61□□□□□ -0.71
SH3RF1-202ENST00000502315 ADAMTS2O95450 1211 aa10.61□□□□□ -0.71
SH3RF1-202ENST00000502315 HRCP23327 699 aa10.61□□□□□ -0.71
SH3RF1-202ENST00000502315 DHX57Q6P158 1386 aaKnown RBP10.61□□□□□ -0.71
SH3RF1-202ENST00000502315 FOXO3O43524 673 aa10.6□□□□□ -0.71
SH3RF1-202ENST00000502315 RGL3Q3MIN7 710 aa10.6□□□□□ -0.71
SH3RF1-202ENST00000502315 KNDC1Q76NI1 1749 aa10.6□□□□□ -0.71
SH3RF1-202ENST00000502315 SPATA31A3Q5VYP0 1347 aa10.59□□□□□ -0.71
SH3RF1-202ENST00000502315 YTHDC2Q9H6S0 1430 aaKnown RBP10.59□□□□□ -0.71
SH3RF1-202ENST00000502315 GJD4Q96KN9 370 aaPredicted RBP10.59□□□□□ -0.71
SH3RF1-202ENST00000502315 NRXN1Q9ULB1 1477 aa10.59□□□□□ -0.71
SH3RF1-202ENST00000502315 KIF1AQ12756 1690 aa10.58□□□□□ -0.72
SH3RF1-202ENST00000502315 BCL9LQ86UU0 1499 aa10.58□□□□□ -0.72
SH3RF1-202ENST00000502315 SBNO1A3KN83 1393 aa10.58□□□□□ -0.72
SH3RF1-202ENST00000502315 WAPLQ7Z5K2 1190 aa10.58□□□□□ -0.72
SH3RF1-202ENST00000502315 UNC5CLQ8IV45 518 aa10.58□□□□□ -0.72
SH3RF1-202ENST00000502315 IFT172Q9UG01 1749 aa10.58□□□□□ -0.72
SH3RF1-202ENST00000502315 ARHGEF10O15013 1369 aa10.57□□□□□ -0.72
SH3RF1-202ENST00000502315 EIF3AQ14152 1382 aaKnown RBP10.57□□□□□ -0.72
SH3RF1-202ENST00000502315 ONECUT3O60422 494 aaPredicted RBP10.57□□□□□ -0.72
SH3RF1-202ENST00000502315 KRT28Q7Z3Y7 464 aa10.57□□□□□ -0.72
SH3RF1-202ENST00000502315 STK26Q9P289 416 aa10.57□□□□□ -0.72
SH3RF1-202ENST00000502315 PHF8Q9UPP1 1060 aa10.56□□□□□ -0.72
SH3RF1-202ENST00000502315 SLIT2O94813 1529 aa10.56□□□□□ -0.72
SH3RF1-202ENST00000502315 DLC1Q96QB1 1528 aa10.56□□□□□ -0.72
SH3RF1-202ENST00000502315 ANKARQ7Z5J8 1434 aa10.56□□□□□ -0.72
SH3RF1-202ENST00000502315 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.55□□□□□ -0.72
SH3RF1-202ENST00000502315 TMEM132EQ6IEE7 984 aa10.55□□□□□ -0.72
SH3RF1-202ENST00000502315 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
SH3RF1-202ENST00000502315 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
SH3RF1-202ENST00000502315 VPS72Q15906 364 aa10.54□□□□□ -0.72
SH3RF1-202ENST00000502315 FMN2Q9NZ56 1722 aa10.54□□□□□ -0.72
SH3RF1-202ENST00000502315 TNS3Q68CZ2 1445 aa10.53□□□□□ -0.72
SH3RF1-202ENST00000502315 PLEKHH1Q9ULM0 1364 aa10.52□□□□□ -0.72
SH3RF1-202ENST00000502315 CFAP70Q5T0N1 1121 aa10.52□□□□□ -0.73
SH3RF1-202ENST00000502315 PRAM1Q96QH2 718 aa10.52□□□□□ -0.73
SH3RF1-202ENST00000502315 POGKQ9P215 609 aa10.52□□□□□ -0.73
SH3RF1-202ENST00000502315 BLMP54132 1417 aaPredicted RBP10.51□□□□□ -0.73
SH3RF1-202ENST00000502315 HAP1P54257 671 aaPredicted RBP10.51□□□□□ -0.73
SH3RF1-202ENST00000502315 GPRASP1Q5JY77 1395 aa10.51□□□□□ -0.73
SH3RF1-202ENST00000502315 RALGAPBQ86X10 1494 aa10.5□□□□□ -0.73
SH3RF1-202ENST00000502315 ADGRB2O60241 1585 aa10.5□□□□□ -0.73
SH3RF1-202ENST00000502315 NWD2Q9ULI1 1742 aa10.5□□□□□ -0.73
SH3RF1-202ENST00000502315 USP32Q8NFA0 1604 aa10.49□□□□□ -0.73
SH3RF1-202ENST00000502315 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
SH3RF1-202ENST00000502315 XPCQ01831 940 aaPredicted RBP10.49□□□□□ -0.73
SH3RF1-202ENST00000502315 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
SH3RF1-202ENST00000502315 WASLO00401 505 aaPredicted RBP10.48□□□□□ -0.73
SH3RF1-202ENST00000502315 RAB3GAP2Q9H2M9 1393 aa10.48□□□□□ -0.73
SH3RF1-202ENST00000502315 KRT27Q7Z3Y8 459 aa10.47□□□□□ -0.73
SH3RF1-202ENST00000502315 SEPT12Q8IYM1 358 aa10.47□□□□□ -0.73
SH3RF1-202ENST00000502315 ADGRB1O14514 1584 aa10.47□□□□□ -0.73
SH3RF1-202ENST00000502315 EP400Q96L91 3159 aa10.47□□□□□ -0.73
SH3RF1-202ENST00000502315 FAM83GA6ND36 823 aa10.46□□□□□ -0.73
SH3RF1-202ENST00000502315 GLI3P10071 1580 aa10.45□□□□□ -0.74
SH3RF1-202ENST00000502315 TULP4Q9NRJ4 1543 aa10.45□□□□□ -0.74
SH3RF1-202ENST00000502315 BRD4O60885 1362 aaPredicted RBP10.45□□□□□ -0.74
SH3RF1-202ENST00000502315 C11orf95C9JLR9 678 aaPredicted RBP10.45□□□□□ -0.74
SH3RF1-202ENST00000502315 DCAF11Q8TEB1 546 aa10.45□□□□□ -0.74
SH3RF1-202ENST00000502315 NGDNQ8NEJ9 315 aaKnown RBP10.44□□□□□ -0.74
SH3RF1-202ENST00000502315 PMFBP1Q8TBY8 1022 aa10.44□□□□□ -0.74
SH3RF1-202ENST00000502315 TRAK1Q9UPV9 953 aa10.44□□□□□ -0.74
SH3RF1-202ENST00000502315 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
SH3RF1-202ENST00000502315 CCDC61Q9Y6R9 512 aa10.43□□□□□ -0.74
SH3RF1-202ENST00000502315 RGPD8O14715 1765 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms