RNA–Protein interactions for RNA: ENST00000498822.5

PCBP4-218, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,547 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-218ENST00000498822 NEFMP07197 916 aa20.76■□□□□ 0.91
PCBP4-218ENST00000498822 FRAT1Q92837 279 aaPredicted RBP20.76■□□□□ 0.91
PCBP4-218ENST00000498822 COG6Q9Y2V7 657 aa20.76■□□□□ 0.91
PCBP4-218ENST00000498822 C14orf93Q9H972 538 aaKnown RBP20.75■□□□□ 0.91
PCBP4-218ENST00000498822 CD109Q6YHK3 1445 aa20.75■□□□□ 0.91
PCBP4-218ENST00000498822 POGZQ7Z3K3 1410 aa20.75■□□□□ 0.91
PCBP4-218ENST00000498822 LMTK2Q8IWU2 1503 aa20.74■□□□□ 0.91
PCBP4-218ENST00000498822 MTHFSP49914 203 aa20.73■□□□□ 0.91
PCBP4-218ENST00000498822 CANXP27824 592 aaKnown RBP20.73■□□□□ 0.91
PCBP4-218ENST00000498822 CABP2Q9NPB3 220 aa20.73■□□□□ 0.91
PCBP4-218ENST00000498822 POLR3AO14802 1390 aaPredicted RBP20.72■□□□□ 0.91
PCBP4-218ENST00000498822 TCP11L2Q8N4U5 519 aa20.72■□□□□ 0.91
PCBP4-218ENST00000498822 SETBP1Q9Y6X0 1596 aa20.72■□□□□ 0.91
PCBP4-218ENST00000498822 SBNO2Q9Y2G9 1366 aa20.71■□□□□ 0.91
PCBP4-218ENST00000498822 NPM1P06748 294 aaKnown RBP eCLIP20.71■□□□□ 0.91
PCBP4-218ENST00000498822 STK26Q9P289 416 aa20.71■□□□□ 0.91
PCBP4-218ENST00000498822 HECW2Q9P2P5 1572 aa20.7■□□□□ 0.9
PCBP4-218ENST00000498822 ABCC3O15438 1527 aa20.7■□□□□ 0.9
PCBP4-218ENST00000498822 FAM161AQ3B820 660 aa20.7■□□□□ 0.9
PCBP4-218ENST00000498822 GLI2P10070 1586 aa20.7■□□□□ 0.9
PCBP4-218ENST00000498822 TULP4Q9NRJ4 1543 aa20.68■□□□□ 0.9
PCBP4-218ENST00000498822 RLBP1P12271 317 aa20.68■□□□□ 0.9
PCBP4-218ENST00000498822 CAMSAP1Q5T5Y3 1602 aa20.67■□□□□ 0.9
PCBP4-218ENST00000498822 CLUAP1Q96AJ1 413 aa20.67■□□□□ 0.9
PCBP4-218ENST00000498822 ARHGEF28Q8N1W1 1705 aaKnown RBP20.67■□□□□ 0.9
PCBP4-218ENST00000498822 MYO5BQ9ULV0 1848 aa20.65■□□□□ 0.9
PCBP4-218ENST00000498822 IQSEC2Q5JU85 1478 aa20.65■□□□□ 0.9
PCBP4-218ENST00000498822 RUNDC1Q96C34 613 aa20.65■□□□□ 0.9
PCBP4-218ENST00000498822 SLC24A1O60721 1099 aa20.64■□□□□ 0.89
PCBP4-218ENST00000498822 MLH3Q9UHC1 1453 aa20.64■□□□□ 0.89
PCBP4-218ENST00000498822 CGNL1Q0VF96 1302 aa20.64■□□□□ 0.89
PCBP4-218ENST00000498822 U2AF1L5P0DN76 240 aaPredicted RBP20.63■□□□□ 0.89
PCBP4-218ENST00000498822 RARSP54136 660 aaKnown RBP20.63■□□□□ 0.89
PCBP4-218ENST00000498822 U2AF1Q01081 240 aaKnown RBP eCLIP20.63■□□□□ 0.89
PCBP4-218ENST00000498822 NEXMIFQ5QGS0 1516 aa20.62■□□□□ 0.89
PCBP4-218ENST00000498822 SEC24BO95487 1268 aa20.62■□□□□ 0.89
PCBP4-218ENST00000498822 IDI1Q13907 227 aa20.62■□□□□ 0.89
PCBP4-218ENST00000498822 DDRGK1Q96HY6 314 aa20.62■□□□□ 0.89
PCBP4-218ENST00000498822 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
PCBP4-218ENST00000498822 TSR2Q969E8 191 aaKnown RBP20.61■□□□□ 0.89
PCBP4-218ENST00000498822 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
PCBP4-218ENST00000498822 PCDHB15Q9Y5E8 787 aa20.6■□□□□ 0.89
PCBP4-218ENST00000498822 MINK1Q8N4C8 1332 aaPredicted RBP20.59■□□□□ 0.89
PCBP4-218ENST00000498822 SRPK2P78362 688 aaKnown RBP20.59■□□□□ 0.89
PCBP4-218ENST00000498822 A0A1W2PP64 1363 aa20.58■□□□□ 0.89
PCBP4-218ENST00000498822 PDE3AQ14432 1141 aa20.58■□□□□ 0.89
PCBP4-218ENST00000498822 YEATS2Q9ULM3 1422 aa20.58■□□□□ 0.88
PCBP4-218ENST00000498822 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.88
PCBP4-218ENST00000498822 PIK3C2BO00750 1634 aa20.57■□□□□ 0.88
PCBP4-218ENST00000498822 CFAP74Q9C0B2 1584 aa20.57■□□□□ 0.88
PCBP4-218ENST00000498822 DIP2CQ9Y2E4 1556 aa20.57■□□□□ 0.88
PCBP4-218ENST00000498822 OSCARQ8IYS5 282 aa20.57■□□□□ 0.88
PCBP4-218ENST00000498822 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
PCBP4-218ENST00000498822 ANKRD36BQ8N2N9 1353 aa20.56■□□□□ 0.88
PCBP4-218ENST00000498822 NFKBIBQ15653 356 aa20.56■□□□□ 0.88
PCBP4-218ENST00000498822 USP32Q8NFA0 1604 aa20.56■□□□□ 0.88
PCBP4-218ENST00000498822 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
PCBP4-218ENST00000498822 FBLN1P23142 703 aa20.56■□□□□ 0.88
PCBP4-218ENST00000498822 CFAP53Q96M91 514 aa20.56■□□□□ 0.88
PCBP4-218ENST00000498822 DAXXQ9UER7 740 aaPredicted RBP20.56■□□□□ 0.88
PCBP4-218ENST00000498822 VIRMAQ69YN4 1812 aaKnown RBP20.56■□□□□ 0.88
PCBP4-218ENST00000498822 RPGRIP1LQ68CZ1 1315 aa20.55■□□□□ 0.88
PCBP4-218ENST00000498822 PPM1GO15355 546 aaPredicted RBP20.55■□□□□ 0.88
PCBP4-218ENST00000498822 USP19O94966 1318 aa20.54■□□□□ 0.88
PCBP4-218ENST00000498822 FBXO31Q5XUX0 539 aaPredicted RBP20.54■□□□□ 0.88
PCBP4-218ENST00000498822 IL27Q8NEV9 243 aa20.53■□□□□ 0.88
PCBP4-218ENST00000498822 PRAM1Q96QH2 718 aa20.52■□□□□ 0.88
PCBP4-218ENST00000498822 NGEFQ8N5V2 710 aa20.52■□□□□ 0.87
PCBP4-218ENST00000498822 WDR63Q8IWG1 891 aa20.5■□□□□ 0.87
PCBP4-218ENST00000498822 RTN4Q9NQC3 1192 aaKnown RBP20.49■□□□□ 0.87
PCBP4-218ENST00000498822 RICTORQ6R327 1708 aa20.48■□□□□ 0.87
PCBP4-218ENST00000498822 EXOSC9Q06265 439 aaKnown RBP20.48■□□□□ 0.87
PCBP4-218ENST00000498822 FRAT2O75474 233 aaPredicted RBP20.48■□□□□ 0.87
PCBP4-218ENST00000498822 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
PCBP4-218ENST00000498822 FYB1O15117 783 aa20.47■□□□□ 0.87
PCBP4-218ENST00000498822 USP35Q9P2H5 1018 aa20.47■□□□□ 0.87
PCBP4-218ENST00000498822 PTPRMP28827 1452 aa20.47■□□□□ 0.87
PCBP4-218ENST00000498822 ABCC11Q96J66 1382 aa20.47■□□□□ 0.87
PCBP4-218ENST00000498822 POGKQ9P215 609 aa20.47■□□□□ 0.87
PCBP4-218ENST00000498822 ADGRB2O60241 1585 aa20.46■□□□□ 0.87
PCBP4-218ENST00000498822 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
PCBP4-218ENST00000498822 PLEKHF1Q96S99 279 aa20.46■□□□□ 0.87
PCBP4-218ENST00000498822 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
PCBP4-218ENST00000498822 CD163L1Q9NR16 1453 aa20.45■□□□□ 0.86
PCBP4-218ENST00000498822 PREX1Q8TCU6 1659 aa20.45■□□□□ 0.86
PCBP4-218ENST00000498822 CCDC27Q2M243 656 aa20.45■□□□□ 0.86
PCBP4-218ENST00000498822 MYH16Q9H6N6 1097 aa20.45■□□□□ 0.86
PCBP4-218ENST00000498822 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
PCBP4-218ENST00000498822 TMPOP42166 694 aaKnown RBP20.44■□□□□ 0.86
PCBP4-218ENST00000498822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.44■□□□□ 0.86
PCBP4-218ENST00000498822 NLRP1Q9C000 1473 aa20.44■□□□□ 0.86
PCBP4-218ENST00000498822 TMEM131LA2VDJ0 1609 aa20.44■□□□□ 0.86
PCBP4-218ENST00000498822 FTSJ3Q8IY81 847 aaKnown RBP20.44■□□□□ 0.86
PCBP4-218ENST00000498822 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
PCBP4-218ENST00000498822 NEO1Q92859 1461 aa20.43■□□□□ 0.86
PCBP4-218ENST00000498822 MAPK8IP3Q9UPT6 1336 aa20.43■□□□□ 0.86
PCBP4-218ENST00000498822 MVPQ14764 893 aaKnown RBP20.42■□□□□ 0.86
PCBP4-218ENST00000498822 SSH1Q8WYL5 1049 aa20.42■□□□□ 0.86
PCBP4-218ENST00000498822 SLKQ9H2G2 1235 aaPredicted RBP20.42■□□□□ 0.86
PCBP4-218ENST00000498822 CABP1Q9NZU7 370 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms