RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 NWD1Q149M9 1564 aa15.24■□□□□ 0.03
GPATCH4-210ENST00000498756 DLC1Q96QB1 1528 aa15.24■□□□□ 0.03
GPATCH4-210ENST00000498756 HSPA1LP34931 641 aa15.24■□□□□ 0.03
GPATCH4-210ENST00000498756 TMEM94Q12767 1356 aa15.24■□□□□ 0.03
GPATCH4-210ENST00000498756 MINK1Q8N4C8 1332 aaPredicted RBP15.23■□□□□ 0.03
GPATCH4-210ENST00000498756 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
GPATCH4-210ENST00000498756 FAM135BQ49AJ0 1406 aa15.23■□□□□ 0.03
GPATCH4-210ENST00000498756 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
GPATCH4-210ENST00000498756 KNDC1Q76NI1 1749 aa15.21■□□□□ 0.03
GPATCH4-210ENST00000498756 PTCH1Q13635 1447 aa15.21■□□□□ 0.03
GPATCH4-210ENST00000498756 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.2■□□□□ 0.02
GPATCH4-210ENST00000498756 C14orf37Q86TY3 774 aa15.18■□□□□ 0.02
GPATCH4-210ENST00000498756 NKTRP30414 1462 aaKnown RBP15.18■□□□□ 0.02
GPATCH4-210ENST00000498756 EIF3AQ14152 1382 aaKnown RBP15.17■□□□□ 0.02
GPATCH4-210ENST00000498756 DISP3Q9P2K9 1392 aa15.17■□□□□ 0.02
GPATCH4-210ENST00000498756 CDK19Q9BWU1 502 aa15.16■□□□□ 0.02
GPATCH4-210ENST00000498756 CABP2Q9NPB3 220 aa15.16■□□□□ 0.02
GPATCH4-210ENST00000498756 MSH6P52701 1360 aa15.15■□□□□ 0.02
GPATCH4-210ENST00000498756 NUTM2FA1L443 756 aa15.15■□□□□ 0.02
GPATCH4-210ENST00000498756 WASLO00401 505 aaPredicted RBP15.15■□□□□ 0.02
GPATCH4-210ENST00000498756 SLAIN2Q9P270 581 aa15.15■□□□□ 0.02
GPATCH4-210ENST00000498756 QRICH2Q9H0J4 1663 aa15.15■□□□□ 0.02
GPATCH4-210ENST00000498756 TULP4Q9NRJ4 1543 aa15.14■□□□□ 0.01
GPATCH4-210ENST00000498756 SBNO2Q9Y2G9 1366 aa15.13■□□□□ 0.01
GPATCH4-210ENST00000498756 C19orf44Q9H6X5 657 aa15.13■□□□□ 0.01
GPATCH4-210ENST00000498756 ADGRL3Q9HAR2 1447 aa15.13■□□□□ 0.01
GPATCH4-210ENST00000498756 PRR36Q9H6K5 1346 aa15.13■□□□□ 0.01
GPATCH4-210ENST00000498756 WASHC2AQ641Q2 1341 aa15.12■□□□□ 0.01
GPATCH4-210ENST00000498756 NALCNQ8IZF0 1738 aa15.12■□□□□ 0.01
GPATCH4-210ENST00000498756 ZNF316A6NFI3 1004 aaPredicted RBP15.11■□□□□ 0.01
GPATCH4-210ENST00000498756 ATF3P18847 181 aa15.11■□□□□ 0.01
GPATCH4-210ENST00000498756 TMF1P82094 1093 aa15.11■□□□□ 0.01
GPATCH4-210ENST00000498756 KIF7Q2M1P5 1343 aa15.11■□□□□ 0.01
GPATCH4-210ENST00000498756 EVC2Q86UK5 1308 aa15.11■□□□□ 0.01
GPATCH4-210ENST00000498756 NCOA3Q9Y6Q9 1424 aa15.1■□□□□ 0.01
GPATCH4-210ENST00000498756 POLR3GLQ9BT43 218 aa15.1■□□□□ 0.01
GPATCH4-210ENST00000498756 SRPK2P78362 688 aaKnown RBP15.09■□□□□ 0.01
GPATCH4-210ENST00000498756 CADPS2Q86UW7 1296 aa15.09■□□□□ 0.01
GPATCH4-210ENST00000498756 NUDT16Q96DE0 195 aaKnown RBP15.09■□□□□ 0.01
GPATCH4-210ENST00000498756 CCDC7Q96M83 1385 aa15.08■□□□□ 0
GPATCH4-210ENST00000498756 ADGRB2O60241 1585 aa15.07■□□□□ 0
GPATCH4-210ENST00000498756 ROBO1Q9Y6N7 1651 aa15.07■□□□□ 0
GPATCH4-210ENST00000498756 ORAI2Q96SN7 254 aa15.07■□□□□ 0
GPATCH4-210ENST00000498756 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
GPATCH4-210ENST00000498756 ILDR2Q71H61 639 aa15.06■□□□□ 0
GPATCH4-210ENST00000498756 CABP1Q9NZU7 370 aa15.05■□□□□ -0
GPATCH4-210ENST00000498756 USP32Q8NFA0 1604 aa15.05■□□□□ -0
GPATCH4-210ENST00000498756 CDC42BPGQ6DT37 1551 aa15.04■□□□□ -0
GPATCH4-210ENST00000498756 MST1RQ04912 1400 aa15.04■□□□□ -0
GPATCH4-210ENST00000498756 PUS7Q96PZ0 661 aaKnown RBP15.04■□□□□ -0
GPATCH4-210ENST00000498756 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
GPATCH4-210ENST00000498756 ATP7BP35670 1465 aa15.03■□□□□ -0
GPATCH4-210ENST00000498756 C1orf167Q5SNV9 1468 aa15.03■□□□□ -0
GPATCH4-210ENST00000498756 SLC24A1O60721 1099 aa15.03■□□□□ -0
GPATCH4-210ENST00000498756 PMFBP1Q8TBY8 1022 aa15.03■□□□□ -0
GPATCH4-210ENST00000498756 TMC1Q8TDI8 760 aa15.03■□□□□ -0
GPATCH4-210ENST00000498756 CCDC61Q9Y6R9 512 aa15.03■□□□□ -0
GPATCH4-210ENST00000498756 DCCP43146 1447 aa15.01□□□□□ -0.01
GPATCH4-210ENST00000498756 RGPD8O14715 1765 aaPredicted RBP15.01□□□□□ -0.01
GPATCH4-210ENST00000498756 DDX10Q13206 875 aaKnown RBP15.01□□□□□ -0.01
GPATCH4-210ENST00000498756 CDCA8Q53HL2 280 aa15.01□□□□□ -0.01
GPATCH4-210ENST00000498756 ESCO1Q5FWF5 840 aa15.01□□□□□ -0.01
GPATCH4-210ENST00000498756 DDX17Q92841 729 aaKnown RBP15.01□□□□□ -0.01
GPATCH4-210ENST00000498756 MED1Q15648 1581 aaPredicted RBP15□□□□□ -0.01
GPATCH4-210ENST00000498756 PLEKHG3A1L390 1219 aa15□□□□□ -0.01
GPATCH4-210ENST00000498756 PHLPP1O60346 1717 aa15□□□□□ -0.01
GPATCH4-210ENST00000498756 PPIP5K1Q6PFW1 1433 aa15□□□□□ -0.01
GPATCH4-210ENST00000498756 ANKARQ7Z5J8 1434 aa15□□□□□ -0.01
GPATCH4-210ENST00000498756 BRINP3Q76B58 766 aa14.99□□□□□ -0.01
GPATCH4-210ENST00000498756 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
GPATCH4-210ENST00000498756 CARD14Q9BXL6 1004 aa14.99□□□□□ -0.01
GPATCH4-210ENST00000498756 PANK3Q9H999 370 aa14.99□□□□□ -0.01
GPATCH4-210ENST00000498756 PHF8Q9UPP1 1060 aa14.99□□□□□ -0.01
GPATCH4-210ENST00000498756 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
GPATCH4-210ENST00000498756 ATAD2Q6PL18 1390 aa14.98□□□□□ -0.01
GPATCH4-210ENST00000498756 ACEP12821 1306 aa14.97□□□□□ -0.01
GPATCH4-210ENST00000498756 FOXO3O43524 673 aa14.97□□□□□ -0.01
GPATCH4-210ENST00000498756 XPCQ01831 940 aaPredicted RBP14.96□□□□□ -0.01
GPATCH4-210ENST00000498756 MYOM1P52179 1685 aa14.96□□□□□ -0.01
GPATCH4-210ENST00000498756 PER1O15534 1290 aaPredicted RBP14.95□□□□□ -0.02
GPATCH4-210ENST00000498756 TOPAZ1Q8N9V7 1692 aa14.95□□□□□ -0.02
GPATCH4-210ENST00000498756 CPSF1Q10570 1443 aaKnown RBP14.94□□□□□ -0.02
GPATCH4-210ENST00000498756 NGDNQ8NEJ9 315 aaKnown RBP14.94□□□□□ -0.02
GPATCH4-210ENST00000498756 A0A1W2PP64 1363 aa14.94□□□□□ -0.02
GPATCH4-210ENST00000498756 POLR3AO14802 1390 aaPredicted RBP14.93□□□□□ -0.02
GPATCH4-210ENST00000498756 JCADQ9P266 1359 aa14.92□□□□□ -0.02
GPATCH4-210ENST00000498756 COL16A1Q07092 1604 aaPredicted RBP14.92□□□□□ -0.02
GPATCH4-210ENST00000498756 ANKRD36BQ8N2N9 1353 aa14.91□□□□□ -0.02
GPATCH4-210ENST00000498756 KRT28Q7Z3Y7 464 aa14.91□□□□□ -0.02
GPATCH4-210ENST00000498756 ZRANB1Q9UGI0 708 aa14.91□□□□□ -0.02
GPATCH4-210ENST00000498756 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
GPATCH4-210ENST00000498756 PSME1Q06323 249 aa14.9□□□□□ -0.02
GPATCH4-210ENST00000498756 HDGFL2Q7Z4V5 671 aaPredicted RBP14.9□□□□□ -0.02
GPATCH4-210ENST00000498756 TERF2IPQ9NYB0 399 aa14.9□□□□□ -0.02
GPATCH4-210ENST00000498756 RGS17Q9UGC6 210 aaPredicted RBP14.9□□□□□ -0.02
GPATCH4-210ENST00000498756 SSH2Q76I76 1423 aa14.9□□□□□ -0.02
GPATCH4-210ENST00000498756 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
GPATCH4-210ENST00000498756 NINLQ9Y2I6 1382 aa14.89□□□□□ -0.03
GPATCH4-210ENST00000498756 SOCS7O14512 581 aa14.89□□□□□ -0.03
GPATCH4-210ENST00000498756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms