RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 SPATA32Q96LK8 384 aa11.8□□□□□ -0.52
FN1-227ENST00000498719 MYBBP1AQ9BQG0 1328 aaKnown RBP11.8□□□□□ -0.52
FN1-227ENST00000498719 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
FN1-227ENST00000498719 RBM26Q5T8P6 1007 aaKnown RBP11.79□□□□□ -0.52
FN1-227ENST00000498719 SHROOM2Q13796 1616 aa11.79□□□□□ -0.52
FN1-227ENST00000498719 LRPPRCP42704 1394 aaKnown RBP11.78□□□□□ -0.52
FN1-227ENST00000498719 FANCIQ9NVI1 1328 aa11.78□□□□□ -0.52
FN1-227ENST00000498719 MAST1Q9Y2H9 1570 aa11.78□□□□□ -0.52
FN1-227ENST00000498719 BRD4O60885 1362 aaPredicted RBP11.77□□□□□ -0.52
FN1-227ENST00000498719 RNF123Q5XPI4 1314 aa11.77□□□□□ -0.52
FN1-227ENST00000498719 CARNS1A5YM72 827 aa11.77□□□□□ -0.52
FN1-227ENST00000498719 RALBP1Q15311 655 aa11.77□□□□□ -0.52
FN1-227ENST00000498719 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.52
FN1-227ENST00000498719 ABCC2Q92887 1545 aa11.77□□□□□ -0.52
FN1-227ENST00000498719 IQGAP3Q86VI3 1631 aa11.77□□□□□ -0.53
FN1-227ENST00000498719 DISP3Q9P2K9 1392 aa11.77□□□□□ -0.53
FN1-227ENST00000498719 KIAA1522Q9P206 1035 aaPredicted RBP11.77□□□□□ -0.53
FN1-227ENST00000498719 STK24Q9Y6E0 443 aa11.77□□□□□ -0.53
FN1-227ENST00000498719 PER1O15534 1290 aaPredicted RBP11.76□□□□□ -0.53
FN1-227ENST00000498719 CC2D1BQ5T0F9 858 aaKnown RBP11.76□□□□□ -0.53
FN1-227ENST00000498719 TESK2Q96S53 571 aa11.76□□□□□ -0.53
FN1-227ENST00000498719 PLXNC1O60486 1568 aa11.76□□□□□ -0.53
FN1-227ENST00000498719 KTN1Q86UP2 1357 aaKnown RBP11.74□□□□□ -0.53
FN1-227ENST00000498719 PARD3Q8TEW0 1356 aa11.74□□□□□ -0.53
FN1-227ENST00000498719 BRD1O95696 1058 aa11.74□□□□□ -0.53
FN1-227ENST00000498719 E2F4Q16254 413 aa11.74□□□□□ -0.53
FN1-227ENST00000498719 GPRASP1Q5JY77 1395 aa11.74□□□□□ -0.53
FN1-227ENST00000498719 PRDM15P57071 1507 aaPredicted RBP11.74□□□□□ -0.53
FN1-227ENST00000498719 NLRP13Q86W25 1043 aa11.74□□□□□ -0.53
FN1-227ENST00000498719 DUOX2Q9NRD8 1548 aa11.73□□□□□ -0.53
FN1-227ENST00000498719 ZCCHC11Q5TAX3 1644 aaKnown RBP11.73□□□□□ -0.53
FN1-227ENST00000498719 COL17A1Q9UMD9 1497 aaPredicted RBP11.73□□□□□ -0.53
FN1-227ENST00000498719 TRAPPC8Q9Y2L5 1435 aa11.73□□□□□ -0.53
FN1-227ENST00000498719 PANK3Q9H999 370 aa11.72□□□□□ -0.53
FN1-227ENST00000498719 STAG3Q9UJ98 1225 aa11.72□□□□□ -0.53
FN1-227ENST00000498719 PLCH2O75038 1416 aa11.72□□□□□ -0.53
FN1-227ENST00000498719 LOC102724159A0A0B4J2E5 919 aa11.71□□□□□ -0.53
FN1-227ENST00000498719 PWP2Q15269 919 aaKnown RBP11.71□□□□□ -0.53
FN1-227ENST00000498719 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
FN1-227ENST00000498719 RYDENQ9NUL5 291 aaKnown RBP11.71□□□□□ -0.53
FN1-227ENST00000498719 AFAP1Q8N556 730 aa11.71□□□□□ -0.54
FN1-227ENST00000498719 CDCA7LQ96GN5 454 aa11.71□□□□□ -0.54
FN1-227ENST00000498719 ERBINQ96RT1 1412 aa11.71□□□□□ -0.54
FN1-227ENST00000498719 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.54
FN1-227ENST00000498719 EFCAB2Q5VUJ9 269 aa11.7□□□□□ -0.54
FN1-227ENST00000498719 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
FN1-227ENST00000498719 ANKRD13AQ8IZ07 590 aa11.7□□□□□ -0.54
FN1-227ENST00000498719 LAMC1P11047 1609 aa11.7□□□□□ -0.54
FN1-227ENST00000498719 DDRGK1Q96HY6 314 aa11.69□□□□□ -0.54
FN1-227ENST00000498719 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
FN1-227ENST00000498719 ABCC1P33527 1531 aa11.69□□□□□ -0.54
FN1-227ENST00000498719 ATP10AO60312 1499 aa11.69□□□□□ -0.54
FN1-227ENST00000498719 NOL8Q76FK4 1167 aaKnown RBP11.69□□□□□ -0.54
FN1-227ENST00000498719 GPIHBP1Q8IV16 184 aa11.69□□□□□ -0.54
FN1-227ENST00000498719 EIF2AK4Q9P2K8 1649 aaKnown RBP11.69□□□□□ -0.54
FN1-227ENST00000498719 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.68□□□□□ -0.54
FN1-227ENST00000498719 RRP1P56182 461 aaKnown RBP11.68□□□□□ -0.54
FN1-227ENST00000498719 TMF1P82094 1093 aa11.68□□□□□ -0.54
FN1-227ENST00000498719 KCNA1Q09470 495 aa11.68□□□□□ -0.54
FN1-227ENST00000498719 IVNS1ABPQ9Y6Y0 642 aa11.68□□□□□ -0.54
FN1-227ENST00000498719 EXOC6Q8TAG9 804 aa11.68□□□□□ -0.54
FN1-227ENST00000498719 RCAN3Q9UKA8 241 aa11.68□□□□□ -0.54
FN1-227ENST00000498719 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
FN1-227ENST00000498719 TEX2Q8IWB9 1127 aa11.67□□□□□ -0.54
FN1-227ENST00000498719 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
FN1-227ENST00000498719 RIPOR2Q9Y4F9 1068 aa11.67□□□□□ -0.54
FN1-227ENST00000498719 SPAG9O60271 1321 aaKnown RBP11.67□□□□□ -0.54
FN1-227ENST00000498719 RNF17Q9BXT8 1623 aaKnown RBP11.67□□□□□ -0.54
FN1-227ENST00000498719 MARCH6O60337 910 aa11.66□□□□□ -0.54
FN1-227ENST00000498719 SND1Q7KZF4 910 aaKnown RBP eCLIP11.66□□□□□ -0.542e-10■■■■■ 38.7
FN1-227ENST00000498719 SMYD5Q6GMV2 418 aa11.65□□□□□ -0.54
FN1-227ENST00000498719 PLIN1O60240 522 aa11.65□□□□□ -0.55
FN1-227ENST00000498719 MADDQ8WXG6 1647 aa11.65□□□□□ -0.55
FN1-227ENST00000498719 CLASP1Q7Z460 1538 aa11.64□□□□□ -0.55
FN1-227ENST00000498719 WASHC2CQ9Y4E1 1318 aa11.64□□□□□ -0.55
FN1-227ENST00000498719 ZFYVE16Q7Z3T8 1539 aa11.64□□□□□ -0.55
FN1-227ENST00000498719 MRRFQ96E11 262 aaKnown RBP11.64□□□□□ -0.55
FN1-227ENST00000498719 ZC3H4Q9UPT8 1303 aaKnown RBP11.63□□□□□ -0.55
FN1-227ENST00000498719 WDR7Q9Y4E6 1490 aa11.63□□□□□ -0.55
FN1-227ENST00000498719 ZNF662Q6ZS27 426 aa11.63□□□□□ -0.55
FN1-227ENST00000498719 CLTCL1P53675 1640 aa11.63□□□□□ -0.55
FN1-227ENST00000498719 SPHKAPQ2M3C7 1700 aa11.63□□□□□ -0.55
FN1-227ENST00000498719 IQGAP1P46940 1657 aa11.63□□□□□ -0.55
FN1-227ENST00000498719 RBM47A0AV96 593 aaKnown RBP11.62□□□□□ -0.55
FN1-227ENST00000498719 PAK3O75914 559 aaPredicted RBP11.62□□□□□ -0.55
FN1-227ENST00000498719 ADAMTS8Q9UP79 889 aa11.62□□□□□ -0.55
FN1-227ENST00000498719 UHRF1BP1LA0JNW5 1464 aa11.62□□□□□ -0.55
FN1-227ENST00000498719 ANKRD62A6NC57 917 aa11.62□□□□□ -0.55
FN1-227ENST00000498719 CEP152O94986 1710 aa11.62□□□□□ -0.55
FN1-227ENST00000498719 BLMP54132 1417 aaPredicted RBP11.62□□□□□ -0.55
FN1-227ENST00000498719 DRC1Q96MC2 740 aa11.62□□□□□ -0.55
FN1-227ENST00000498719 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
FN1-227ENST00000498719 TRPM2O94759 1503 aa11.61□□□□□ -0.55
FN1-227ENST00000498719 KIF3BO15066 747 aa11.6□□□□□ -0.55
FN1-227ENST00000498719 MLLT3P42568 568 aaPredicted RBP11.6□□□□□ -0.55
FN1-227ENST00000498719 PARP9Q8IXQ6 854 aa11.6□□□□□ -0.55
FN1-227ENST00000498719 KNSTRNQ9Y448 316 aa11.6□□□□□ -0.55
FN1-227ENST00000498719 PATL2C9JE40 543 aaKnown RBP11.6□□□□□ -0.55
FN1-227ENST00000498719 SKIV2LQ15477 1246 aaKnown RBP11.6□□□□□ -0.55
FN1-227ENST00000498719 UGGT1Q9NYU2 1555 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms