RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 TMEM2Q9UHN6 1383 aa8.33□□□□□ -1.08
CSTF1-207ENST00000498689 LAMC1P11047 1609 aa8.32□□□□□ -1.08
CSTF1-207ENST00000498689 NALCNQ8IZF0 1738 aa8.32□□□□□ -1.08
CSTF1-207ENST00000498689 KCNQ2O43526 872 aa8.32□□□□□ -1.08
CSTF1-207ENST00000498689 PRKAR2AP13861 404 aaKnown RBP8.32□□□□□ -1.08
CSTF1-207ENST00000498689 ATF3P18847 181 aa8.32□□□□□ -1.08
CSTF1-207ENST00000498689 FAM182BQ5T319 152 aa8.32□□□□□ -1.08
CSTF1-207ENST00000498689 CADPS2Q86UW7 1296 aa8.32□□□□□ -1.08
CSTF1-207ENST00000498689 ATP1B4Q9UN42 357 aaPredicted RBP8.32□□□□□ -1.08
CSTF1-207ENST00000498689 EVX2Q03828 476 aa8.31□□□□□ -1.08
CSTF1-207ENST00000498689 KRT27Q7Z3Y8 459 aa8.31□□□□□ -1.08
CSTF1-207ENST00000498689 SPDYE1Q8NFV5 336 aaPredicted RBP8.31□□□□□ -1.08
CSTF1-207ENST00000498689 PLCH1Q4KWH8 1693 aa8.3□□□□□ -1.08
CSTF1-207ENST00000498689 MST1RQ04912 1400 aa8.3□□□□□ -1.08
CSTF1-207ENST00000498689 DHX29Q7Z478 1369 aaKnown RBP8.3□□□□□ -1.08
CSTF1-207ENST00000498689 DISP2A7MBM2 1401 aa8.29□□□□□ -1.08
CSTF1-207ENST00000498689 CLIP1P30622 1438 aa8.29□□□□□ -1.08
CSTF1-207ENST00000498689 WDR90Q96KV7 1748 aa8.29□□□□□ -1.08
CSTF1-207ENST00000498689 DNAJC5GQ8N7S2 189 aa8.29□□□□□ -1.08
CSTF1-207ENST00000498689 CAMKK2Q96RR4 588 aa8.29□□□□□ -1.08
CSTF1-207ENST00000498689 C19orf44Q9H6X5 657 aa8.29□□□□□ -1.08
CSTF1-207ENST00000498689 NCOA3Q9Y6Q9 1424 aa8.29□□□□□ -1.08
CSTF1-207ENST00000498689 EFCAB6Q5THR3 1501 aa8.28□□□□□ -1.08
CSTF1-207ENST00000498689 TNS2Q63HR2 1409 aa8.28□□□□□ -1.08
CSTF1-207ENST00000498689 MYOM2P54296 1465 aa8.27□□□□□ -1.09
CSTF1-207ENST00000498689 ADGRB2O60241 1585 aa8.26□□□□□ -1.09
CSTF1-207ENST00000498689 SLIT2O94813 1529 aa8.25□□□□□ -1.09
CSTF1-207ENST00000498689 PDGFDQ9GZP0 370 aaPredicted RBP8.25□□□□□ -1.09
CSTF1-207ENST00000498689 CDK11AQ9UQ88 783 aaPredicted RBP8.25□□□□□ -1.09
CSTF1-207ENST00000498689 SSUH2Q9Y2M2 353 aa8.25□□□□□ -1.09
CSTF1-207ENST00000498689 KIAA1210Q9ULL0 1709 aa8.25□□□□□ -1.09
CSTF1-207ENST00000498689 DLC1Q96QB1 1528 aa8.24□□□□□ -1.09
CSTF1-207ENST00000498689 NWD2Q9ULI1 1742 aa8.24□□□□□ -1.09
CSTF1-207ENST00000498689 FMN1Q68DA7 1419 aa8.24□□□□□ -1.09
CSTF1-207ENST00000498689 UNC5CLQ8IV45 518 aa8.24□□□□□ -1.09
CSTF1-207ENST00000498689 SYT17Q9BSW7 474 aa8.24□□□□□ -1.09
CSTF1-207ENST00000498689 FHDC1Q9C0D6 1143 aaPredicted RBP8.24□□□□□ -1.09
CSTF1-207ENST00000498689 TMEM131LA2VDJ0 1609 aa8.24□□□□□ -1.09
CSTF1-207ENST00000498689 KIAA1107Q9UPP5 1409 aa8.23□□□□□ -1.09
CSTF1-207ENST00000498689 FAM83GA6ND36 823 aa8.23□□□□□ -1.09
CSTF1-207ENST00000498689 BCANQ96GW7 911 aa8.23□□□□□ -1.09
CSTF1-207ENST00000498689 WWC3Q9ULE0 1092 aa8.23□□□□□ -1.09
CSTF1-207ENST00000498689 ADGRB3O60242 1522 aa8.23□□□□□ -1.09
CSTF1-207ENST00000498689 ONECUT3O60422 494 aaPredicted RBP8.22□□□□□ -1.09
CSTF1-207ENST00000498689 CHADLQ6NUI6 762 aa8.22□□□□□ -1.09
CSTF1-207ENST00000498689 NRAPQ86VF7 1730 aa8.22□□□□□ -1.09
CSTF1-207ENST00000498689 CROCC2H7BZ55 1655 aa8.21□□□□□ -1.09
CSTF1-207ENST00000498689 TRPM2O94759 1503 aa8.21□□□□□ -1.1
CSTF1-207ENST00000498689 PTGER2P43116 358 aa8.21□□□□□ -1.1
CSTF1-207ENST00000498689 USP32Q8NFA0 1604 aa8.21□□□□□ -1.1
CSTF1-207ENST00000498689 PTPN23Q9H3S7 1636 aa8.21□□□□□ -1.1
CSTF1-207ENST00000498689 GCC2Q8IWJ2 1684 aa8.21□□□□□ -1.1
CSTF1-207ENST00000498689 DCCP43146 1447 aa8.2□□□□□ -1.1
CSTF1-207ENST00000498689 FAM161AQ3B820 660 aa8.2□□□□□ -1.1
CSTF1-207ENST00000498689 SOS2Q07890 1332 aaPredicted RBP8.2□□□□□ -1.1
CSTF1-207ENST00000498689 XRN1Q8IZH2 1706 aaKnown RBP8.2□□□□□ -1.1
CSTF1-207ENST00000498689 ATP10DQ9P241 1426 aa8.2□□□□□ -1.1
CSTF1-207ENST00000498689 MBD5Q9P267 1494 aa8.19□□□□□ -1.1
CSTF1-207ENST00000498689 ZBTB7AO95365 584 aa8.19□□□□□ -1.1
CSTF1-207ENST00000498689 ABCA3Q99758 1704 aa8.19□□□□□ -1.1
CSTF1-207ENST00000498689 ZNF644Q9H582 1327 aaPredicted RBP8.19□□□□□ -1.1
CSTF1-207ENST00000498689 PTPRUQ92729 1446 aa8.19□□□□□ -1.1
CSTF1-207ENST00000498689 PLEKHH2Q8IVE3 1493 aa8.19□□□□□ -1.1
CSTF1-207ENST00000498689 THSD7AQ9UPZ6 1657 aa8.18□□□□□ -1.1
CSTF1-207ENST00000498689 A0A0G2JS52 829 aa8.18□□□□□ -1.1
CSTF1-207ENST00000498689 PPP1R15AO75807 674 aaPredicted RBP8.18□□□□□ -1.1
CSTF1-207ENST00000498689 TRIM37O94972 964 aa8.18□□□□□ -1.1
CSTF1-207ENST00000498689 PRR29P0C7W0 189 aa8.18□□□□□ -1.1
CSTF1-207ENST00000498689 MYT1Q01538 1121 aa8.18□□□□□ -1.1
CSTF1-207ENST00000498689 STAG3Q9UJ98 1225 aa8.18□□□□□ -1.1
CSTF1-207ENST00000498689 C19orf67A6NJJ6 358 aa8.17□□□□□ -1.1
CSTF1-207ENST00000498689 APBA3O96018 575 aa8.17□□□□□ -1.1
CSTF1-207ENST00000498689 APLP1P51693 650 aa8.17□□□□□ -1.1
CSTF1-207ENST00000498689 HTRA3P83110 453 aa8.17□□□□□ -1.1
CSTF1-207ENST00000498689 PDE4DIPQ5VU43 2346 aa8.17□□□□□ -1.1
CSTF1-207ENST00000498689 ZFYVE9O95405 1425 aa8.16□□□□□ -1.1
CSTF1-207ENST00000498689 VPS72Q15906 364 aa8.16□□□□□ -1.1
CSTF1-207ENST00000498689 GPR162Q16538 588 aa8.16□□□□□ -1.1
CSTF1-207ENST00000498689 FAM98CQ17RN3 349 aaKnown RBP8.16□□□□□ -1.1
CSTF1-207ENST00000498689 NBPF8Q3BBV2 869 aa8.16□□□□□ -1.1
CSTF1-207ENST00000498689 NBPF14Q5TI25 921 aa8.16□□□□□ -1.1
CSTF1-207ENST00000498689 SBF2Q86WG5 1849 aa8.16□□□□□ -1.1
CSTF1-207ENST00000498689 ZNF526Q8TF50 670 aaPredicted RBP8.16□□□□□ -1.1
CSTF1-207ENST00000498689 ADGRL3Q9HAR2 1447 aa8.16□□□□□ -1.1
CSTF1-207ENST00000498689 PLEKHG1Q9ULL1 1385 aa8.16□□□□□ -1.1
CSTF1-207ENST00000498689 CCDC9Q9Y3X0 531 aaKnown RBP8.16□□□□□ -1.1
CSTF1-207ENST00000498689 EIF2AK4Q9P2K8 1649 aaKnown RBP8.15□□□□□ -1.1
CSTF1-207ENST00000498689 C1orf167Q5SNV9 1468 aa8.15□□□□□ -1.1
CSTF1-207ENST00000498689 ADAMTS13Q76LX8 1427 aa8.15□□□□□ -1.1
CSTF1-207ENST00000498689 PARD3Q8TEW0 1356 aa8.15□□□□□ -1.1
CSTF1-207ENST00000498689 IDI1Q13907 227 aa8.15□□□□□ -1.1
CSTF1-207ENST00000498689 JMYQ8N9B5 988 aa8.15□□□□□ -1.1
CSTF1-207ENST00000498689 ORAI2Q96SN7 254 aa8.15□□□□□ -1.1
CSTF1-207ENST00000498689 EHBP1L1Q8N3D4 1523 aa8.14□□□□□ -1.11
CSTF1-207ENST00000498689 NOS1P29475 1434 aa8.14□□□□□ -1.11
CSTF1-207ENST00000498689 GPBP1L1Q9HC44 474 aaPredicted RBP8.14□□□□□ -1.11
CSTF1-207ENST00000498689 PXDNQ92626 1479 aa8.13□□□□□ -1.11
CSTF1-207ENST00000498689 RGPD3A6NKT7 1758 aaPredicted RBP8.13□□□□□ -1.11
CSTF1-207ENST00000498689 RGPD4Q7Z3J3 1758 aa8.13□□□□□ -1.11
CSTF1-207ENST00000498689 ANO8Q9HCE9 1232 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms