RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.77■□□□□ 0.44
CDK9-205ENST00000498339 MYOM2P54296 1465 aa17.76■□□□□ 0.43
CDK9-205ENST00000498339 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
CDK9-205ENST00000498339 HFM1A2PYH4 1435 aa17.76■□□□□ 0.43
CDK9-205ENST00000498339 NPHP3Q7Z494 1330 aa17.75■□□□□ 0.43
CDK9-205ENST00000498339 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
CDK9-205ENST00000498339 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
CDK9-205ENST00000498339 CCDC125Q86Z20 511 aa17.74■□□□□ 0.43
CDK9-205ENST00000498339 BRWD3Q6RI45 1802 aa17.74■□□□□ 0.43
CDK9-205ENST00000498339 XPCQ01831 940 aaPredicted RBP17.73■□□□□ 0.43
CDK9-205ENST00000498339 BCL9LQ86UU0 1499 aa17.73■□□□□ 0.43
CDK9-205ENST00000498339 PXDNQ92626 1479 aa17.73■□□□□ 0.43
CDK9-205ENST00000498339 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
CDK9-205ENST00000498339 GJD4Q96KN9 370 aaPredicted RBP17.71■□□□□ 0.43
CDK9-205ENST00000498339 PPARGC1BQ86YN6 1023 aaKnown RBP17.7■□□□□ 0.42
CDK9-205ENST00000498339 GLI3P10071 1580 aa17.7■□□□□ 0.42
CDK9-205ENST00000498339 LRPPRCP42704 1394 aaKnown RBP17.69■□□□□ 0.42
CDK9-205ENST00000498339 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
CDK9-205ENST00000498339 FOXO3O43524 673 aa17.69■□□□□ 0.42
CDK9-205ENST00000498339 KIF1AQ12756 1690 aa17.68■□□□□ 0.42
CDK9-205ENST00000498339 BLMP54132 1417 aaPredicted RBP17.68■□□□□ 0.42
CDK9-205ENST00000498339 USP32Q8NFA0 1604 aa17.68■□□□□ 0.42
CDK9-205ENST00000498339 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
CDK9-205ENST00000498339 NAIPQ13075 1403 aa17.67■□□□□ 0.42
CDK9-205ENST00000498339 SF3B2Q13435 895 aaKnown RBP17.67■□□□□ 0.42
CDK9-205ENST00000498339 PLCH1Q4KWH8 1693 aa17.66■□□□□ 0.42
CDK9-205ENST00000498339 FMN2Q9NZ56 1722 aa17.66■□□□□ 0.42
CDK9-205ENST00000498339 RPGRIP1LQ68CZ1 1315 aa17.66■□□□□ 0.42
CDK9-205ENST00000498339 KNDC1Q76NI1 1749 aa17.65■□□□□ 0.42
CDK9-205ENST00000498339 HAP1P54257 671 aaPredicted RBP17.65■□□□□ 0.42
CDK9-205ENST00000498339 IFT172Q9UG01 1749 aa17.64■□□□□ 0.41
CDK9-205ENST00000498339 UNC5CLQ8IV45 518 aa17.64■□□□□ 0.41
CDK9-205ENST00000498339 STK26Q9P289 416 aa17.64■□□□□ 0.41
CDK9-205ENST00000498339 LRP5O75197 1615 aa17.64■□□□□ 0.41
CDK9-205ENST00000498339 RGPD8O14715 1765 aaPredicted RBP17.63■□□□□ 0.41
CDK9-205ENST00000498339 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
CDK9-205ENST00000498339 DEFB132Q7Z7B7 95 aa17.63■□□□□ 0.41
CDK9-205ENST00000498339 CCDC144AA2RUR9 1427 aa17.63■□□□□ 0.41
CDK9-205ENST00000498339 SLIT2O94813 1529 aa17.62■□□□□ 0.41
CDK9-205ENST00000498339 NWD2Q9ULI1 1742 aa17.61■□□□□ 0.41
CDK9-205ENST00000498339 CCDC9Q9Y3X0 531 aaKnown RBP17.61■□□□□ 0.41
CDK9-205ENST00000498339 RRBP1Q9P2E9 1410 aaKnown RBP17.61■□□□□ 0.41
CDK9-205ENST00000498339 ABCA3Q99758 1704 aa17.61■□□□□ 0.41
CDK9-205ENST00000498339 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
CDK9-205ENST00000498339 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
CDK9-205ENST00000498339 A0A0G2JS52 829 aa17.59■□□□□ 0.41
CDK9-205ENST00000498339 MYT1Q01538 1121 aa17.59■□□□□ 0.41
CDK9-205ENST00000498339 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
CDK9-205ENST00000498339 SEPT12Q8IYM1 358 aa17.58■□□□□ 0.4
CDK9-205ENST00000498339 TECPR2O15040 1411 aa17.57■□□□□ 0.4
CDK9-205ENST00000498339 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
CDK9-205ENST00000498339 PLEKHH1Q9ULM0 1364 aa17.56■□□□□ 0.4
CDK9-205ENST00000498339 ADGRF5Q8IZF2 1346 aa17.56■□□□□ 0.4
CDK9-205ENST00000498339 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
CDK9-205ENST00000498339 KRT28Q7Z3Y7 464 aa17.56■□□□□ 0.4
CDK9-205ENST00000498339 RGL3Q3MIN7 710 aa17.55■□□□□ 0.4
CDK9-205ENST00000498339 PSDA5PKW4 1024 aaPredicted RBP17.54■□□□□ 0.4
CDK9-205ENST00000498339 KRT27Q7Z3Y8 459 aa17.54■□□□□ 0.4
CDK9-205ENST00000498339 RGPD1P0DJD0 1748 aa17.53■□□□□ 0.4
CDK9-205ENST00000498339 VPS72Q15906 364 aa17.53■□□□□ 0.4
CDK9-205ENST00000498339 TMEM132EQ6IEE7 984 aa17.53■□□□□ 0.4
CDK9-205ENST00000498339 CABLES1Q8TDN4 633 aa17.53■□□□□ 0.4
CDK9-205ENST00000498339 BAG6P46379 1132 aa17.52■□□□□ 0.4
CDK9-205ENST00000498339 PSME1Q06323 249 aa17.52■□□□□ 0.4
CDK9-205ENST00000498339 NRAPQ86VF7 1730 aa17.52■□□□□ 0.39
CDK9-205ENST00000498339 ABCC11Q96J66 1382 aa17.52■□□□□ 0.39
CDK9-205ENST00000498339 YTHDC2Q9H6S0 1430 aaKnown RBP17.51■□□□□ 0.39
CDK9-205ENST00000498339 PHF8Q9UPP1 1060 aa17.51■□□□□ 0.39
CDK9-205ENST00000498339 ANKRD30BQ9BXX2 1392 aa17.51■□□□□ 0.39
CDK9-205ENST00000498339 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
CDK9-205ENST00000498339 ARHGEF10O15013 1369 aa17.49■□□□□ 0.39
CDK9-205ENST00000498339 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
CDK9-205ENST00000498339 SBNO1A3KN83 1393 aa17.47■□□□□ 0.39
CDK9-205ENST00000498339 SPATA31E1Q6ZUB1 1445 aa17.47■□□□□ 0.39
CDK9-205ENST00000498339 COL14A1Q05707 1796 aaKnown RBP17.46■□□□□ 0.39
CDK9-205ENST00000498339 HRCP23327 699 aa17.46■□□□□ 0.39
CDK9-205ENST00000498339 SAFB2Q14151 953 aaKnown RBP eCLIP17.46■□□□□ 0.39
CDK9-205ENST00000498339 FAM98CQ17RN3 349 aaKnown RBP17.46■□□□□ 0.39
CDK9-205ENST00000498339 TNS1Q9HBL0 1735 aaKnown RBP17.45■□□□□ 0.38
CDK9-205ENST00000498339 TRPM3Q9HCF6 1732 aaPredicted RBP17.44■□□□□ 0.38
CDK9-205ENST00000498339 ONECUT3O60422 494 aaPredicted RBP17.44■□□□□ 0.38
CDK9-205ENST00000498339 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
CDK9-205ENST00000498339 FAM83GA6ND36 823 aa17.43■□□□□ 0.38
CDK9-205ENST00000498339 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
CDK9-205ENST00000498339 PMFBP1Q8TBY8 1022 aa17.43■□□□□ 0.38
CDK9-205ENST00000498339 BTG4Q9NY30 223 aa17.43■□□□□ 0.38
CDK9-205ENST00000498339 ALS2Q96Q42 1657 aa17.42■□□□□ 0.38
CDK9-205ENST00000498339 DHX57Q6P158 1386 aaKnown RBP17.41■□□□□ 0.38
CDK9-205ENST00000498339 R3HDM1Q15032 1099 aaKnown RBP17.41■□□□□ 0.38
CDK9-205ENST00000498339 FAM182BQ5T319 152 aa17.41■□□□□ 0.38
CDK9-205ENST00000498339 PRAM1Q96QH2 718 aa17.4■□□□□ 0.38
CDK9-205ENST00000498339 ANKARQ7Z5J8 1434 aa17.39■□□□□ 0.38
CDK9-205ENST00000498339 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
CDK9-205ENST00000498339 POGKQ9P215 609 aa17.39■□□□□ 0.37
CDK9-205ENST00000498339 SIRT1Q96EB6 747 aa17.38■□□□□ 0.37
CDK9-205ENST00000498339 GPRASP1Q5JY77 1395 aa17.38■□□□□ 0.37
CDK9-205ENST00000498339 CRYBG1Q9Y4K1 1723 aa17.38■□□□□ 0.37
CDK9-205ENST00000498339 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
CDK9-205ENST00000498339 MPHOSPH9Q99550 1183 aa17.36■□□□□ 0.37
CDK9-205ENST00000498339 C14orf93Q9H972 538 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms