RNA–Protein interactions for RNA: ENST00000497730.1

TRA2A-210, Transcript of transformer 2 alpha homolog, human

TSL 3

Gene TRA2A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2A-210	ENST00000497730	NYAP1	Q6ZVC0	841 aa		11.87	□□□□□ -0.51
TRA2A-210	ENST00000497730	LILRB3	O75022	631 aa		11.86	□□□□□ -0.51
TRA2A-210	ENST00000497730	HRC	P23327	699 aa		11.86	□□□□□ -0.51
TRA2A-210	ENST00000497730	PRPF38B	Q5VTL8	546 aa	Known RBP	11.86	□□□□□ -0.51
TRA2A-210	ENST00000497730	NR1I2	O75469	434 aa		11.85	□□□□□ -0.51
TRA2A-210	ENST00000497730	RFC5	P40937	340 aa		11.85	□□□□□ -0.51
TRA2A-210	ENST00000497730	COPS2	P61201	443 aa		11.85	□□□□□ -0.51
TRA2A-210	ENST00000497730	MTMR2	Q13614	643 aa		11.85	□□□□□ -0.51
TRA2A-210	ENST00000497730		Q3C1V9	767 aa		11.85	□□□□□ -0.51
TRA2A-210	ENST00000497730	SYMPK	Q92797	1274 aa	Known RBP	11.85	□□□□□ -0.51
TRA2A-210	ENST00000497730	RTL5	Q5HYW3	569 aa	Predicted RBP	11.84	□□□□□ -0.51
TRA2A-210	ENST00000497730	PPP2R2D	Q66LE6	453 aa		11.84	□□□□□ -0.51
TRA2A-210	ENST00000497730	SCUBE3	Q8IX30	993 aa		11.84	□□□□□ -0.51
TRA2A-210	ENST00000497730	RNF19B	Q6ZMZ0	732 aa		11.81	□□□□□ -0.52
TRA2A-210	ENST00000497730	HCST	Q9UBK5	93 aa		11.81	□□□□□ -0.52
TRA2A-210	ENST00000497730	SPDYE5	A6NIY4	337 aa		11.8	□□□□□ -0.52
TRA2A-210	ENST00000497730	TSC1	Q92574	1164 aa		11.8	□□□□□ -0.52
TRA2A-210	ENST00000497730	MTR	Q99707	1265 aa		11.8	□□□□□ -0.52
TRA2A-210	ENST00000497730	AP1G2	O75843	785 aa		11.79	□□□□□ -0.52
TRA2A-210	ENST00000497730	TMEM259	Q4ZIN3	620 aa		11.78	□□□□□ -0.52
TRA2A-210	ENST00000497730	CFAP99	D6REC4	459 aa		11.77	□□□□□ -0.53
TRA2A-210	ENST00000497730	FMNL1	O95466	1100 aa	Predicted RBP	11.77	□□□□□ -0.53
TRA2A-210	ENST00000497730	BRICD5	Q6PL45	260 aa		11.77	□□□□□ -0.53
TRA2A-210	ENST00000497730	C14orf37	Q86TY3	774 aa		11.77	□□□□□ -0.53
TRA2A-210	ENST00000497730	RETREG3	Q86VR2	466 aa		11.77	□□□□□ -0.53
TRA2A-210	ENST00000497730	PRR7	Q8TB68	274 aa		11.77	□□□□□ -0.53
TRA2A-210	ENST00000497730	SALL2	Q9Y467	1007 aa	Predicted RBP	11.77	□□□□□ -0.53
TRA2A-210	ENST00000497730	TJAP1	Q5JTD0	557 aa		11.76	□□□□□ -0.53
TRA2A-210	ENST00000497730	THAP11	Q96EK4	314 aa		11.76	□□□□□ -0.53
TRA2A-210	ENST00000497730	TLL1	O43897	1013 aa		11.75	□□□□□ -0.53
TRA2A-210	ENST00000497730	ZPR1	O75312	459 aa		11.75	□□□□□ -0.53
TRA2A-210	ENST00000497730	USB1	Q9BQ65	265 aa	Known RBP	11.75	□□□□□ -0.53
TRA2A-210	ENST00000497730	IL21	Q9HBE4	155 aa		11.75	□□□□□ -0.53
TRA2A-210	ENST00000497730	FLII	Q13045	1269 aa		11.74	□□□□□ -0.53
TRA2A-210	ENST00000497730	HELB	Q8NG08	1087 aa	Predicted RBP	11.74	□□□□□ -0.53
TRA2A-210	ENST00000497730	ZNF516	Q92618	1163 aa		11.74	□□□□□ -0.53
TRA2A-210	ENST00000497730	SPSB2	Q99619	263 aa		11.74	□□□□□ -0.53
TRA2A-210	ENST00000497730	TIMELESS	Q9UNS1	1208 aa		11.74	□□□□□ -0.53
TRA2A-210	ENST00000497730	MCM6	Q14566	821 aa		11.72	□□□□□ -0.53
TRA2A-210	ENST00000497730	BANK1	Q8NDB2	785 aa		11.72	□□□□□ -0.53
TRA2A-210	ENST00000497730	USP17L8	P0C7I0	530 aa		11.71	□□□□□ -0.53
TRA2A-210	ENST00000497730	CTDSPL2	Q05D32	466 aa		11.71	□□□□□ -0.53
TRA2A-210	ENST00000497730	SNRK	Q9NRH2	765 aa		11.71	□□□□□ -0.53
TRA2A-210	ENST00000497730	ERICH6	Q7L0X2	663 aa		11.7	□□□□□ -0.54
TRA2A-210	ENST00000497730	ADH1B	P00325	375 aa		11.69	□□□□□ -0.54
TRA2A-210	ENST00000497730	FAM160A2	Q8N612	972 aa	Predicted RBP	11.69	□□□□□ -0.54
TRA2A-210	ENST00000497730	NKX2-3	Q8TAU0	364 aa		11.67	□□□□□ -0.54
TRA2A-210	ENST00000497730	LRRN4	Q8WUT4	740 aa		11.67	□□□□□ -0.54
TRA2A-210	ENST00000497730	PRDM9	Q9NQV7	894 aa		11.67	□□□□□ -0.54
TRA2A-210	ENST00000497730	PER1	O15534	1290 aa	Predicted RBP	11.66	□□□□□ -0.54
TRA2A-210	ENST00000497730	MSS51	Q4VC12	460 aa		11.66	□□□□□ -0.54
TRA2A-210	ENST00000497730	DESI1	Q6ICB0	168 aa		11.66	□□□□□ -0.54
TRA2A-210	ENST00000497730	PLA2G2E	Q9NZK7	142 aa		11.66	□□□□□ -0.54
TRA2A-210	ENST00000497730	UBTF	P17480	764 aa	Known RBP	11.65	□□□□□ -0.54
TRA2A-210	ENST00000497730	JUND	P17535	347 aa		11.65	□□□□□ -0.54
TRA2A-210	ENST00000497730	KCNC4	Q03721	635 aa		11.65	□□□□□ -0.54
TRA2A-210	ENST00000497730	MTMR14	Q8NCE2	650 aa		11.65	□□□□□ -0.54
TRA2A-210	ENST00000497730	SLC6A16	Q9GZN6	736 aa		11.64	□□□□□ -0.55
TRA2A-210	ENST00000497730	ITGBL1	O95965	494 aa	Predicted RBP	11.63	□□□□□ -0.55
TRA2A-210	ENST00000497730	LYPD8	Q6UX82	237 aa		11.63	□□□□□ -0.55
TRA2A-210	ENST00000497730	HMX1	Q9NP08	348 aa	Predicted RBP	11.63	□□□□□ -0.55
TRA2A-210	ENST00000497730	APBB1	O00213	710 aa		11.61	□□□□□ -0.55
TRA2A-210	ENST00000497730	DXO	O77932	396 aa	Known RBP	11.61	□□□□□ -0.55
TRA2A-210	ENST00000497730	S1PR4	O95977	384 aa		11.6	□□□□□ -0.55
TRA2A-210	ENST00000497730	MMP16	P51512	607 aa		11.6	□□□□□ -0.55
TRA2A-210	ENST00000497730	PTPRN	Q16849	979 aa		11.6	□□□□□ -0.55
TRA2A-210	ENST00000497730	CLUAP1	Q96AJ1	413 aa		11.6	□□□□□ -0.55
TRA2A-210	ENST00000497730	RAD21	O60216	631 aa		11.58	□□□□□ -0.56
TRA2A-210	ENST00000497730	POM121	Q96HA1	1249 aa		11.58	□□□□□ -0.56
TRA2A-210	ENST00000497730	NR6A1	Q15406	480 aa		11.57	□□□□□ -0.56
TRA2A-210	ENST00000497730	EPS8L1	Q8TE68	723 aa		11.57	□□□□□ -0.56
TRA2A-210	ENST00000497730	NUDT12	Q9BQG2	462 aa		11.57	□□□□□ -0.56
TRA2A-210	ENST00000497730	ZMYND15	Q9H091	742 aa		11.57	□□□□□ -0.56
TRA2A-210	ENST00000497730	SOCS7	O14512	581 aa		11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	CCNYL3	P0C7X3	344 aa		11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	CTH	P32929	405 aa		11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	CCDC24	Q8N4L8	307 aa		11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	GJD4	Q96KN9	370 aa	Predicted RBP	11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	TRIM34	Q9BYJ4	488 aa		11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	PRM3	Q9NNZ6	103 aa		11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	MAP10	Q9P2G4	905 aa		11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	COG6	Q9Y2V7	657 aa		11.56	□□□□□ -0.56
TRA2A-210	ENST00000497730	GDPD2	Q9HCC8	539 aa		11.55	□□□□□ -0.56
TRA2A-210	ENST00000497730	TBC1D2B	Q9UPU7	963 aa		11.55	□□□□□ -0.56
TRA2A-210	ENST00000497730	NDUFB9	Q9Y6M9	179 aa		11.55	□□□□□ -0.56
TRA2A-210	ENST00000497730	F12	P00748	615 aa	Predicted RBP	11.53	□□□□□ -0.56
TRA2A-210	ENST00000497730	ABL2	P42684	1182 aa		11.53	□□□□□ -0.56
TRA2A-210	ENST00000497730	FCF1	Q9Y324	198 aa	Known RBP	11.53	□□□□□ -0.56
TRA2A-210	ENST00000497730	EVA1B	Q9NVM1	165 aa		11.52	□□□□□ -0.57
TRA2A-210	ENST00000497730	PPEF1	O14829	653 aa	Predicted RBP	11.51	□□□□□ -0.57
TRA2A-210	ENST00000497730	GGCX	P38435	758 aa		11.51	□□□□□ -0.57
TRA2A-210	ENST00000497730	KCNH2	Q12809	1159 aa		11.5	□□□□□ -0.57
TRA2A-210	ENST00000497730		A6NJR5	290 aa		11.49	□□□□□ -0.57
TRA2A-210	ENST00000497730	RNF223	E7ERA6	249 aa		11.49	□□□□□ -0.57
TRA2A-210	ENST00000497730	PPP1R18	Q6NYC8	613 aa		11.49	□□□□□ -0.57
TRA2A-210	ENST00000497730	PROSER2	Q86WR7	435 aa	Predicted RBP	11.49	□□□□□ -0.57
TRA2A-210	ENST00000497730	PNMA1	Q8ND90	353 aa		11.49	□□□□□ -0.57
TRA2A-210	ENST00000497730	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.46	□□□□□ -0.57
TRA2A-210	ENST00000497730	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.46	□□□□□ -0.57
TRA2A-210	ENST00000497730	GPR37L1	O60883	481 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms