RNA–Protein interactions for RNA: ENST00000497685.5

UPK1B-205, Transcript of uroplakin 1B, humanhuman

TSL 2 BASIC

Gene UPK1B, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-205ENST00000497685 PTCH1Q13635 1447 aa20.71■□□□□ 0.91
UPK1B-205ENST00000497685 PPLO60437 1756 aa20.71■□□□□ 0.91
UPK1B-205ENST00000497685 LRP6O75581 1613 aa20.71■□□□□ 0.91
UPK1B-205ENST00000497685 DCAF11Q8TEB1 546 aa20.7■□□□□ 0.9
UPK1B-205ENST00000497685 AFF2P51816 1311 aa20.7■□□□□ 0.9
UPK1B-205ENST00000497685 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
UPK1B-205ENST00000497685 QTRT2Q9H974 415 aaKnown RBP20.69■□□□□ 0.9
UPK1B-205ENST00000497685 POGKQ9P215 609 aa20.69■□□□□ 0.9
UPK1B-205ENST00000497685 DHX57Q6P158 1386 aaKnown RBP20.68■□□□□ 0.9
UPK1B-205ENST00000497685 ABCC11Q96J66 1382 aa20.68■□□□□ 0.9
UPK1B-205ENST00000497685 PLEKHH1Q9ULM0 1364 aa20.68■□□□□ 0.9
UPK1B-205ENST00000497685 SOS2Q07890 1332 aaPredicted RBP20.67■□□□□ 0.9
UPK1B-205ENST00000497685 NALCNQ8IZF0 1738 aa20.67■□□□□ 0.9
UPK1B-205ENST00000497685 PLEKHG5O94827 1062 aa20.66■□□□□ 0.9
UPK1B-205ENST00000497685 PNPLA6Q8IY17 1366 aa20.66■□□□□ 0.9
UPK1B-205ENST00000497685 PRAM1Q96QH2 718 aa20.65■□□□□ 0.9
UPK1B-205ENST00000497685 YTHDC2Q9H6S0 1430 aaKnown RBP20.64■□□□□ 0.89
UPK1B-205ENST00000497685 NPHP3Q7Z494 1330 aa20.64■□□□□ 0.89
UPK1B-205ENST00000497685 TRAK1Q9UPV9 953 aa20.64■□□□□ 0.89
UPK1B-205ENST00000497685 HRCP23327 699 aa20.63■□□□□ 0.89
UPK1B-205ENST00000497685 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
UPK1B-205ENST00000497685 SETD1AO15047 1707 aaKnown RBP20.63■□□□□ 0.89
UPK1B-205ENST00000497685 PIK3C2GO75747 1445 aa20.62■□□□□ 0.89
UPK1B-205ENST00000497685 KRT28Q7Z3Y7 464 aa20.61■□□□□ 0.89
UPK1B-205ENST00000497685 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
UPK1B-205ENST00000497685 LMOD2Q6P5Q4 547 aa20.6■□□□□ 0.89
UPK1B-205ENST00000497685 USP21Q9UK80 565 aa20.6■□□□□ 0.89
UPK1B-205ENST00000497685 HIRIP3Q9BW71 556 aaPredicted RBP20.59■□□□□ 0.89
UPK1B-205ENST00000497685 NHSL1Q5SYE7 1610 aa20.58■□□□□ 0.89
UPK1B-205ENST00000497685 RBM6P78332 1123 aaKnown RBP20.58■□□□□ 0.89
UPK1B-205ENST00000497685 PSME1Q06323 249 aa20.58■□□□□ 0.89
UPK1B-205ENST00000497685 PRAG1Q86YV5 1406 aa20.58■□□□□ 0.88
UPK1B-205ENST00000497685 TECPR2O15040 1411 aa20.57■□□□□ 0.88
UPK1B-205ENST00000497685 PMFBP1Q8TBY8 1022 aa20.57■□□□□ 0.88
UPK1B-205ENST00000497685 PHF8Q9UPP1 1060 aa20.57■□□□□ 0.88
UPK1B-205ENST00000497685 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
UPK1B-205ENST00000497685 MINK1Q8N4C8 1332 aaPredicted RBP20.55■□□□□ 0.88
UPK1B-205ENST00000497685 UPF1Q92900 1129 aaKnown RBP eCLIP20.53■□□□□ 0.88
UPK1B-205ENST00000497685 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
UPK1B-205ENST00000497685 STAC3Q96MF2 364 aa20.52■□□□□ 0.88
UPK1B-205ENST00000497685 TRPC5Q9UL62 973 aaPredicted RBP20.52■□□□□ 0.88
UPK1B-205ENST00000497685 FNBP4Q8N3X1 1017 aaPredicted RBP20.51■□□□□ 0.87
UPK1B-205ENST00000497685 CABLES1Q8TDN4 633 aa20.51■□□□□ 0.87
UPK1B-205ENST00000497685 MYOM2P54296 1465 aa20.5■□□□□ 0.87
UPK1B-205ENST00000497685 CDC42BPGQ6DT37 1551 aa20.5■□□□□ 0.87
UPK1B-205ENST00000497685 SPATA31A3Q5VYP0 1347 aa20.5■□□□□ 0.87
UPK1B-205ENST00000497685 NRXN1Q9ULB1 1477 aa20.5■□□□□ 0.87
UPK1B-205ENST00000497685 PXDNQ92626 1479 aa20.46■□□□□ 0.87
UPK1B-205ENST00000497685 WASLO00401 505 aaPredicted RBP20.46■□□□□ 0.87
UPK1B-205ENST00000497685 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
UPK1B-205ENST00000497685 PAK3O75914 559 aaPredicted RBP20.44■□□□□ 0.86
UPK1B-205ENST00000497685 NEUROD1Q13562 356 aa20.43■□□□□ 0.86
UPK1B-205ENST00000497685 CCDC9Q9Y3X0 531 aaKnown RBP20.42■□□□□ 0.86
UPK1B-205ENST00000497685 LAMC1P11047 1609 aa20.42■□□□□ 0.86
UPK1B-205ENST00000497685 KNDC1Q76NI1 1749 aa20.41■□□□□ 0.86
UPK1B-205ENST00000497685 NBPF1Q3BBV0 1214 aa20.41■□□□□ 0.86
UPK1B-205ENST00000497685 UNC5CLQ8IV45 518 aa20.41■□□□□ 0.86
UPK1B-205ENST00000497685 GJD4Q96KN9 370 aaPredicted RBP20.41■□□□□ 0.86
UPK1B-205ENST00000497685 SIN3AQ96ST3 1273 aa20.4■□□□□ 0.86
UPK1B-205ENST00000497685 CDK19Q9BWU1 502 aa20.4■□□□□ 0.86
UPK1B-205ENST00000497685 FMN2Q9NZ56 1722 aa20.39■□□□□ 0.86
UPK1B-205ENST00000497685 GPRASP1Q5JY77 1395 aa20.39■□□□□ 0.85
UPK1B-205ENST00000497685 NUDT16Q96DE0 195 aaKnown RBP20.39■□□□□ 0.85
UPK1B-205ENST00000497685 PRR36Q9H6K5 1346 aa20.38■□□□□ 0.85
UPK1B-205ENST00000497685 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
UPK1B-205ENST00000497685 RGS12O14924 1447 aa20.37■□□□□ 0.85
UPK1B-205ENST00000497685 RGPD8O14715 1765 aaPredicted RBP20.37■□□□□ 0.85
UPK1B-205ENST00000497685 FAM83GA6ND36 823 aa20.36■□□□□ 0.85
UPK1B-205ENST00000497685 ADGRB1O14514 1584 aa20.36■□□□□ 0.85
UPK1B-205ENST00000497685 DLC1Q96QB1 1528 aa20.36■□□□□ 0.85
UPK1B-205ENST00000497685 BCL9LQ86UU0 1499 aa20.36■□□□□ 0.85
UPK1B-205ENST00000497685 L3MBTL2Q969R5 705 aa20.35■□□□□ 0.85
UPK1B-205ENST00000497685 TNS3Q68CZ2 1445 aa20.35■□□□□ 0.85
UPK1B-205ENST00000497685 SBNO1A3KN83 1393 aa20.34■□□□□ 0.85
UPK1B-205ENST00000497685 ATRNO75882 1429 aa20.34■□□□□ 0.85
UPK1B-205ENST00000497685 ANKARQ7Z5J8 1434 aa20.34■□□□□ 0.85
UPK1B-205ENST00000497685 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
UPK1B-205ENST00000497685 EIF3AQ14152 1382 aaKnown RBP20.34■□□□□ 0.85
UPK1B-205ENST00000497685 COL22A1Q8NFW1 1626 aaPredicted RBP20.32■□□□□ 0.84
UPK1B-205ENST00000497685 A0A0G2JS52 829 aa20.32■□□□□ 0.84
UPK1B-205ENST00000497685 SRPK2P78362 688 aaKnown RBP20.32■□□□□ 0.84
UPK1B-205ENST00000497685 MYT1Q01538 1121 aa20.32■□□□□ 0.84
UPK1B-205ENST00000497685 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
UPK1B-205ENST00000497685 KIF1AQ12756 1690 aa20.32■□□□□ 0.84
UPK1B-205ENST00000497685 ATAD2Q6PL18 1390 aa20.31■□□□□ 0.84
UPK1B-205ENST00000497685 BTG4Q9NY30 223 aa20.3■□□□□ 0.84
UPK1B-205ENST00000497685 CCDC61Q9Y6R9 512 aa20.3■□□□□ 0.84
UPK1B-205ENST00000497685 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
UPK1B-205ENST00000497685 VPS72Q15906 364 aa20.28■□□□□ 0.84
UPK1B-205ENST00000497685 SEPT12Q8IYM1 358 aa20.28■□□□□ 0.84
UPK1B-205ENST00000497685 ACEP12821 1306 aa20.27■□□□□ 0.84
UPK1B-205ENST00000497685 CABP2Q9NPB3 220 aa20.27■□□□□ 0.84
UPK1B-205ENST00000497685 PRDM11Q9NQV5 511 aa20.26■□□□□ 0.83
UPK1B-205ENST00000497685 CENPJQ9HC77 1338 aaPredicted RBP20.26■□□□□ 0.83
UPK1B-205ENST00000497685 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
UPK1B-205ENST00000497685 SLIT2O94813 1529 aa20.24■□□□□ 0.83
UPK1B-205ENST00000497685 ZC3H6P61129 1189 aaKnown RBP20.24■□□□□ 0.83
UPK1B-205ENST00000497685 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
UPK1B-205ENST00000497685 ABTB2Q8N961 1025 aa20.24■□□□□ 0.83
UPK1B-205ENST00000497685 TULP4Q9NRJ4 1543 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms