RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 LAMC1P11047 1609 aa25.37■■□□□ 1.65
SMC4-226ENST00000497311 RAB3GAP2Q9H2M9 1393 aa25.37■■□□□ 1.65
SMC4-226ENST00000497311 ABCC11Q96J66 1382 aa25.36■■□□□ 1.65
SMC4-226ENST00000497311 WAPLQ7Z5K2 1190 aa25.36■■□□□ 1.65
SMC4-226ENST00000497311 AFF2P51816 1311 aa25.36■■□□□ 1.65
SMC4-226ENST00000497311 CDC42BPGQ6DT37 1551 aa25.35■■□□□ 1.65
SMC4-226ENST00000497311 RXRBP28702 533 aa25.35■■□□□ 1.65
SMC4-226ENST00000497311 ESCO1Q5FWF5 840 aa25.34■■□□□ 1.65
SMC4-226ENST00000497311 C8orf37Q96NL8 207 aa25.34■■□□□ 1.65
SMC4-226ENST00000497311 YTHDC2Q9H6S0 1430 aaKnown RBP25.31■■□□□ 1.64
SMC4-226ENST00000497311 C14orf93Q9H972 538 aaKnown RBP25.31■■□□□ 1.64
SMC4-226ENST00000497311 KNDC1Q76NI1 1749 aa25.31■■□□□ 1.64
SMC4-226ENST00000497311 NPHP3Q7Z494 1330 aa25.3■■□□□ 1.64
SMC4-226ENST00000497311 PLEKHH1Q9ULM0 1364 aa25.3■■□□□ 1.64
SMC4-226ENST00000497311 ADAMTS2O95450 1211 aa25.29■■□□□ 1.64
SMC4-226ENST00000497311 NUTM2FA1L443 756 aa25.28■■□□□ 1.64
SMC4-226ENST00000497311 MYOM2P54296 1465 aa25.28■■□□□ 1.64
SMC4-226ENST00000497311 NRXN1Q9ULB1 1477 aa25.28■■□□□ 1.64
SMC4-226ENST00000497311 CFAP70Q5T0N1 1121 aa25.27■■□□□ 1.64
SMC4-226ENST00000497311 SIRT1Q96EB6 747 aa25.27■■□□□ 1.64
SMC4-226ENST00000497311 NGLY1Q96IV0 654 aa25.27■■□□□ 1.64
SMC4-226ENST00000497311 FOXO3O43524 673 aa25.26■■□□□ 1.63
SMC4-226ENST00000497311 QTRT2Q9H974 415 aaKnown RBP25.26■■□□□ 1.63
SMC4-226ENST00000497311 DHX57Q6P158 1386 aaKnown RBP25.26■■□□□ 1.63
SMC4-226ENST00000497311 CDK12Q9NYV4 1490 aaPredicted RBP25.24■■□□□ 1.63
SMC4-226ENST00000497311 XPCQ01831 940 aaPredicted RBP25.22■■□□□ 1.63
SMC4-226ENST00000497311 PXDNQ92626 1479 aa25.21■■□□□ 1.63
SMC4-226ENST00000497311 RBM6P78332 1123 aaKnown RBP25.21■■□□□ 1.63
SMC4-226ENST00000497311 COL22A1Q8NFW1 1626 aaPredicted RBP25.2■■□□□ 1.62
SMC4-226ENST00000497311 HRCP23327 699 aa25.2■■□□□ 1.62
SMC4-226ENST00000497311 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.62
SMC4-226ENST00000497311 UPF1Q92900 1129 aaKnown RBP eCLIP25.19■■□□□ 1.62
SMC4-226ENST00000497311 USP21Q9UK80 565 aa25.18■■□□□ 1.62
SMC4-226ENST00000497311 PRAM1Q96QH2 718 aa25.17■■□□□ 1.62
SMC4-226ENST00000497311 SAFB2Q14151 953 aaKnown RBP eCLIP25.16■■□□□ 1.62
SMC4-226ENST00000497311 FNBP4Q8N3X1 1017 aaPredicted RBP25.15■■□□□ 1.62
SMC4-226ENST00000497311 POGKQ9P215 609 aa25.15■■□□□ 1.62
SMC4-226ENST00000497311 KIF1AQ12756 1690 aa25.14■■□□□ 1.62
SMC4-226ENST00000497311 DCAF11Q8TEB1 546 aa25.14■■□□□ 1.62
SMC4-226ENST00000497311 TRPC5Q9UL62 973 aaPredicted RBP25.14■■□□□ 1.62
SMC4-226ENST00000497311 KDM2AQ9Y2K7 1162 aa25.14■■□□□ 1.62
SMC4-226ENST00000497311 RGS12O14924 1447 aa25.13■■□□□ 1.61
SMC4-226ENST00000497311 DLC1Q96QB1 1528 aa25.12■■□□□ 1.61
SMC4-226ENST00000497311 KRT28Q7Z3Y7 464 aa25.12■■□□□ 1.61
SMC4-226ENST00000497311 STAC3Q96MF2 364 aa25.12■■□□□ 1.61
SMC4-226ENST00000497311 PHF8Q9UPP1 1060 aa25.12■■□□□ 1.61
SMC4-226ENST00000497311 SPATA31A3Q5VYP0 1347 aa25.12■■□□□ 1.61
SMC4-226ENST00000497311 TRAK1Q9UPV9 953 aa25.1■■□□□ 1.61
SMC4-226ENST00000497311 ADGRB1O14514 1584 aa25.1■■□□□ 1.61
SMC4-226ENST00000497311 RGPD8O14715 1765 aaPredicted RBP25.09■■□□□ 1.61
SMC4-226ENST00000497311 PSME1Q06323 249 aa25.08■■□□□ 1.61
SMC4-226ENST00000497311 MARF1Q9Y4F3 1742 aaKnown RBP25.06■■□□□ 1.6
SMC4-226ENST00000497311 ATRNO75882 1429 aa25.06■■□□□ 1.6
SMC4-226ENST00000497311 ANKARQ7Z5J8 1434 aa25.03■■□□□ 1.6
SMC4-226ENST00000497311 BCL9LQ86UU0 1499 aa25.03■■□□□ 1.6
SMC4-226ENST00000497311 HIRIP3Q9BW71 556 aaPredicted RBP25.03■■□□□ 1.6
SMC4-226ENST00000497311 TNS3Q68CZ2 1445 aa25.03■■□□□ 1.6
SMC4-226ENST00000497311 ADGRB2O60241 1585 aa25.02■■□□□ 1.6
SMC4-226ENST00000497311 PMFBP1Q8TBY8 1022 aa25.02■■□□□ 1.6
SMC4-226ENST00000497311 MINK1Q8N4C8 1332 aaPredicted RBP25.02■■□□□ 1.6
SMC4-226ENST00000497311 HAP1P54257 671 aaPredicted RBP25.01■■□□□ 1.59
SMC4-226ENST00000497311 SBNO1A3KN83 1393 aa25.01■■□□□ 1.59
SMC4-226ENST00000497311 LMOD2Q6P5Q4 547 aa24.99■■□□□ 1.59
SMC4-226ENST00000497311 USP32Q8NFA0 1604 aa24.99■■□□□ 1.59
SMC4-226ENST00000497311 EIF3AQ14152 1382 aaKnown RBP24.98■■□□□ 1.59
SMC4-226ENST00000497311 GJD4Q96KN9 370 aaPredicted RBP24.98■■□□□ 1.59
SMC4-226ENST00000497311 ARHGEF10O15013 1369 aa24.97■■□□□ 1.59
SMC4-226ENST00000497311 ATAD2Q6PL18 1390 aa24.97■■□□□ 1.59
SMC4-226ENST00000497311 WASLO00401 505 aaPredicted RBP24.97■■□□□ 1.59
SMC4-226ENST00000497311 UNC5CLQ8IV45 518 aa24.97■■□□□ 1.59
SMC4-226ENST00000497311 PLEKHG5O94827 1062 aa24.96■■□□□ 1.59
SMC4-226ENST00000497311 CABLES1Q8TDN4 633 aa24.96■■□□□ 1.59
SMC4-226ENST00000497311 SLIT2O94813 1529 aa24.96■■□□□ 1.59
SMC4-226ENST00000497311 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.95■■□□□ 1.58
SMC4-226ENST00000497311 PRR36Q9H6K5 1346 aa24.93■■□□□ 1.58
SMC4-226ENST00000497311 TULP4Q9NRJ4 1543 aa24.93■■□□□ 1.58
SMC4-226ENST00000497311 GPRASP1Q5JY77 1395 aa24.93■■□□□ 1.58
SMC4-226ENST00000497311 ARHGEF28Q8N1W1 1705 aaKnown RBP24.9■■□□□ 1.58
SMC4-226ENST00000497311 NGDNQ8NEJ9 315 aaKnown RBP24.89■■□□□ 1.58
SMC4-226ENST00000497311 RALGAPBQ86X10 1494 aa24.89■■□□□ 1.57
SMC4-226ENST00000497311 ABCA3Q99758 1704 aa24.86■■□□□ 1.57
SMC4-226ENST00000497311 TRPM3Q9HCF6 1732 aaPredicted RBP24.86■■□□□ 1.57
SMC4-226ENST00000497311 GLI3P10071 1580 aa24.86■■□□□ 1.57
SMC4-226ENST00000497311 VPS72Q15906 364 aa24.85■■□□□ 1.57
SMC4-226ENST00000497311 NUDT16Q96DE0 195 aaKnown RBP24.85■■□□□ 1.57
SMC4-226ENST00000497311 KIAA1210Q9ULL0 1709 aa24.84■■□□□ 1.57
SMC4-226ENST00000497311 FAM83GA6ND36 823 aa24.84■■□□□ 1.57
SMC4-226ENST00000497311 NWD2Q9ULI1 1742 aa24.83■■□□□ 1.57
SMC4-226ENST00000497311 PLCH1Q4KWH8 1693 aa24.83■■□□□ 1.57
SMC4-226ENST00000497311 ALS2Q96Q42 1657 aa24.83■■□□□ 1.57
SMC4-226ENST00000497311 PAK3O75914 559 aaPredicted RBP24.83■■□□□ 1.57
SMC4-226ENST00000497311 CDK19Q9BWU1 502 aa24.83■■□□□ 1.57
SMC4-226ENST00000497311 CCDC9Q9Y3X0 531 aaKnown RBP24.83■■□□□ 1.57
SMC4-226ENST00000497311 CCDC125Q86Z20 511 aa24.82■■□□□ 1.56
SMC4-226ENST00000497311 ATP7BP35670 1465 aa24.82■■□□□ 1.56
SMC4-226ENST00000497311 ITSN1Q15811 1721 aa24.81■■□□□ 1.56
SMC4-226ENST00000497311 NBPF1Q3BBV0 1214 aa24.81■■□□□ 1.56
SMC4-226ENST00000497311 EP400Q96L91 3159 aa24.8■■□□□ 1.56
SMC4-226ENST00000497311 SEPT12Q8IYM1 358 aa24.79■■□□□ 1.56
SMC4-226ENST00000497311 BTG4Q9NY30 223 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms