RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 AHDC1Q5TGY3 1603 aaPredicted RBP11.51□□□□□ -0.57
SRRM1-220ENST00000496882 SPATA31A6Q5VVP1 1343 aa11.51□□□□□ -0.57
SRRM1-220ENST00000496882 ADGRF5Q8IZF2 1346 aa11.51□□□□□ -0.57
SRRM1-220ENST00000496882 MST1RQ04912 1400 aa11.51□□□□□ -0.57
SRRM1-220ENST00000496882 SPATA31E1Q6ZUB1 1445 aa11.51□□□□□ -0.57
SRRM1-220ENST00000496882 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
SRRM1-220ENST00000496882 ASXL1Q8IXJ9 1541 aa11.5□□□□□ -0.57
SRRM1-220ENST00000496882 COL16A1Q07092 1604 aaPredicted RBP11.49□□□□□ -0.57
SRRM1-220ENST00000496882 POLA2Q14181 598 aa11.49□□□□□ -0.57
SRRM1-220ENST00000496882 STK26Q9P289 416 aa11.49□□□□□ -0.57
SRRM1-220ENST00000496882 NALCNQ8IZF0 1738 aa11.49□□□□□ -0.57
SRRM1-220ENST00000496882 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
SRRM1-220ENST00000496882 LRRC59Q96AG4 307 aaKnown RBP11.48□□□□□ -0.57
SRRM1-220ENST00000496882 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
SRRM1-220ENST00000496882 PRAG1Q86YV5 1406 aa11.48□□□□□ -0.57
SRRM1-220ENST00000496882 SETD1AO15047 1707 aaKnown RBP11.48□□□□□ -0.57
SRRM1-220ENST00000496882 HRCP23327 699 aa11.47□□□□□ -0.57
SRRM1-220ENST00000496882 RNF39Q9H2S5 420 aa11.47□□□□□ -0.57
SRRM1-220ENST00000496882 C1orf167Q5SNV9 1468 aa11.46□□□□□ -0.57
SRRM1-220ENST00000496882 PIK3C2GO75747 1445 aa11.46□□□□□ -0.57
SRRM1-220ENST00000496882 LRPPRCP42704 1394 aaKnown RBP11.46□□□□□ -0.57
SRRM1-220ENST00000496882 NUTM2BA6NNL0 878 aaPredicted RBP11.46□□□□□ -0.57
SRRM1-220ENST00000496882 NUTM2EB1AL46 878 aaPredicted RBP11.46□□□□□ -0.57
SRRM1-220ENST00000496882 NUTM2AQ8IVF1 878 aaPredicted RBP11.46□□□□□ -0.57
SRRM1-220ENST00000496882 IFT172Q9UG01 1749 aa11.46□□□□□ -0.58
SRRM1-220ENST00000496882 DHX57Q6P158 1386 aaKnown RBP11.45□□□□□ -0.58
SRRM1-220ENST00000496882 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
SRRM1-220ENST00000496882 RGS17Q9UGC6 210 aaPredicted RBP11.45□□□□□ -0.58
SRRM1-220ENST00000496882 SHPRHQ149N8 1683 aa11.45□□□□□ -0.58
SRRM1-220ENST00000496882 MYOM2P54296 1465 aa11.44□□□□□ -0.58
SRRM1-220ENST00000496882 ABCC11Q96J66 1382 aa11.44□□□□□ -0.58
SRRM1-220ENST00000496882 CAPN15O75808 1086 aa11.44□□□□□ -0.58
SRRM1-220ENST00000496882 ZNF772Q68DY9 489 aaPredicted RBP11.44□□□□□ -0.58
SRRM1-220ENST00000496882 NHSL1Q5SYE7 1610 aa11.44□□□□□ -0.58
SRRM1-220ENST00000496882 TECPR2O15040 1411 aa11.43□□□□□ -0.58
SRRM1-220ENST00000496882 YTHDC2Q9H6S0 1430 aaKnown RBP11.43□□□□□ -0.58
SRRM1-220ENST00000496882 LAMC1P11047 1609 aa11.43□□□□□ -0.58
SRRM1-220ENST00000496882 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
SRRM1-220ENST00000496882 ESCO1Q5FWF5 840 aa11.43□□□□□ -0.58
SRRM1-220ENST00000496882 C14orf93Q9H972 538 aaKnown RBP11.43□□□□□ -0.58
SRRM1-220ENST00000496882 CDC42BPGQ6DT37 1551 aa11.42□□□□□ -0.58
SRRM1-220ENST00000496882 NPHP3Q7Z494 1330 aa11.42□□□□□ -0.58
SRRM1-220ENST00000496882 CFAP70Q5T0N1 1121 aa11.42□□□□□ -0.58
SRRM1-220ENST00000496882 POTEAQ6S8J7 498 aa11.42□□□□□ -0.58
SRRM1-220ENST00000496882 WAPLQ7Z5K2 1190 aa11.42□□□□□ -0.58
SRRM1-220ENST00000496882 DDX17Q92841 729 aaKnown RBP11.42□□□□□ -0.58
SRRM1-220ENST00000496882 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
SRRM1-220ENST00000496882 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
SRRM1-220ENST00000496882 KNDC1Q76NI1 1749 aa11.41□□□□□ -0.58
SRRM1-220ENST00000496882 IFNLR1Q8IU57 520 aaPredicted RBP11.41□□□□□ -0.58
SRRM1-220ENST00000496882 DCAF11Q8TEB1 546 aa11.41□□□□□ -0.58
SRRM1-220ENST00000496882 POGKQ9P215 609 aa11.41□□□□□ -0.58
SRRM1-220ENST00000496882 KDM2AQ9Y2K7 1162 aa11.41□□□□□ -0.58
SRRM1-220ENST00000496882 LRP6O75581 1613 aa11.41□□□□□ -0.58
SRRM1-220ENST00000496882 PNPLA6Q8IY17 1366 aa11.41□□□□□ -0.58
SRRM1-220ENST00000496882 NRXN1Q9ULB1 1477 aa11.4□□□□□ -0.58
SRRM1-220ENST00000496882 NUTM2FA1L443 756 aa11.4□□□□□ -0.58
SRRM1-220ENST00000496882 SIRT1Q96EB6 747 aa11.4□□□□□ -0.58
SRRM1-220ENST00000496882 SOS2Q07890 1332 aaPredicted RBP11.39□□□□□ -0.59
SRRM1-220ENST00000496882 ZBTB12Q9Y330 459 aaPredicted RBP11.39□□□□□ -0.59
SRRM1-220ENST00000496882 PLEKHH1Q9ULM0 1364 aa11.39□□□□□ -0.59
SRRM1-220ENST00000496882 SAFB2Q14151 953 aaKnown RBP eCLIP11.38□□□□□ -0.59
SRRM1-220ENST00000496882 C8orf37Q96NL8 207 aa11.38□□□□□ -0.59
SRRM1-220ENST00000496882 PRAM1Q96QH2 718 aa11.38□□□□□ -0.59
SRRM1-220ENST00000496882 AFF2P51816 1311 aa11.37□□□□□ -0.59
SRRM1-220ENST00000496882 ADAMTS2O95450 1211 aa11.37□□□□□ -0.59
SRRM1-220ENST00000496882 FOXO3O43524 673 aa11.36□□□□□ -0.59
SRRM1-220ENST00000496882 RXRBP28702 533 aa11.36□□□□□ -0.59
SRRM1-220ENST00000496882 NGLY1Q96IV0 654 aa11.36□□□□□ -0.59
SRRM1-220ENST00000496882 TRAK1Q9UPV9 953 aa11.36□□□□□ -0.59
SRRM1-220ENST00000496882 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
SRRM1-220ENST00000496882 EIF3AQ14152 1382 aaKnown RBP11.35□□□□□ -0.59
SRRM1-220ENST00000496882 FMN2Q9NZ56 1722 aa11.35□□□□□ -0.59
SRRM1-220ENST00000496882 KIF1AQ12756 1690 aa11.34□□□□□ -0.59
SRRM1-220ENST00000496882 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
SRRM1-220ENST00000496882 PSME1Q06323 249 aa11.34□□□□□ -0.59
SRRM1-220ENST00000496882 HAP1P54257 671 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-220ENST00000496882 PHF8Q9UPP1 1060 aa11.33□□□□□ -0.6
SRRM1-220ENST00000496882 KRT28Q7Z3Y7 464 aa11.32□□□□□ -0.6
SRRM1-220ENST00000496882 QTRT2Q9H974 415 aaKnown RBP11.32□□□□□ -0.6
SRRM1-220ENST00000496882 ADGRB1O14514 1584 aa11.32□□□□□ -0.6
SRRM1-220ENST00000496882 MINK1Q8N4C8 1332 aaPredicted RBP11.32□□□□□ -0.6
SRRM1-220ENST00000496882 PXDNQ92626 1479 aa11.32□□□□□ -0.6
SRRM1-220ENST00000496882 RBM6P78332 1123 aaKnown RBP11.31□□□□□ -0.6
SRRM1-220ENST00000496882 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
SRRM1-220ENST00000496882 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
SRRM1-220ENST00000496882 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
SRRM1-220ENST00000496882 USP21Q9UK80 565 aa11.31□□□□□ -0.6
SRRM1-220ENST00000496882 ANKARQ7Z5J8 1434 aa11.31□□□□□ -0.6
SRRM1-220ENST00000496882 COL22A1Q8NFW1 1626 aaPredicted RBP11.3□□□□□ -0.6
SRRM1-220ENST00000496882 CDK12Q9NYV4 1490 aaPredicted RBP11.3□□□□□ -0.6
SRRM1-220ENST00000496882 SPATA31A3Q5VYP0 1347 aa11.3□□□□□ -0.6
SRRM1-220ENST00000496882 ADGRB2O60241 1585 aa11.29□□□□□ -0.6
SRRM1-220ENST00000496882 PMFBP1Q8TBY8 1022 aa11.29□□□□□ -0.6
SRRM1-220ENST00000496882 TRPC5Q9UL62 973 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-220ENST00000496882 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
SRRM1-220ENST00000496882 TNS3Q68CZ2 1445 aa11.28□□□□□ -0.6
SRRM1-220ENST00000496882 WASLO00401 505 aaPredicted RBP11.28□□□□□ -0.6
SRRM1-220ENST00000496882 ARHGEF10O15013 1369 aa11.28□□□□□ -0.6
SRRM1-220ENST00000496882 ABCB7O75027 752 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms