RNA–Protein interactions for RNA: ENST00000496659.1

C4A-258, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-258ENST00000496659 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
C4A-258ENST00000496659 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
C4A-258ENST00000496659 SIRT1Q96EB6 747 aa13.95□□□□□ -0.18
C4A-258ENST00000496659 POGKQ9P215 609 aa13.95□□□□□ -0.18
C4A-258ENST00000496659 NKTRP30414 1462 aaKnown RBP13.94□□□□□ -0.18
C4A-258ENST00000496659 CHD2O14647 1828 aaKnown RBP13.93□□□□□ -0.18
C4A-258ENST00000496659 PROSER2Q86WR7 435 aaPredicted RBP13.93□□□□□ -0.18
C4A-258ENST00000496659 AMOTL2Q9Y2J4 779 aa13.93□□□□□ -0.18
C4A-258ENST00000496659 TMEM94Q12767 1356 aa13.93□□□□□ -0.18
C4A-258ENST00000496659 PTPRUQ92729 1446 aa13.92□□□□□ -0.18
C4A-258ENST00000496659 TMF1P82094 1093 aa13.92□□□□□ -0.18
C4A-258ENST00000496659 CDCA8Q53HL2 280 aa13.92□□□□□ -0.18
C4A-258ENST00000496659 PRAM1Q96QH2 718 aa13.92□□□□□ -0.18
C4A-258ENST00000496659 SOCS7O14512 581 aa13.9□□□□□ -0.18
C4A-258ENST00000496659 ROBO2Q9HCK4 1378 aa13.9□□□□□ -0.18
C4A-258ENST00000496659 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
C4A-258ENST00000496659 EVC2Q86UK5 1308 aa13.89□□□□□ -0.19
C4A-258ENST00000496659 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
C4A-258ENST00000496659 TESK2Q96S53 571 aa13.88□□□□□ -0.19
C4A-258ENST00000496659 MED1Q15648 1581 aaPredicted RBP13.88□□□□□ -0.19
C4A-258ENST00000496659 SAFB2Q14151 953 aaKnown RBP eCLIP13.86□□□□□ -0.19
C4A-258ENST00000496659 CCDC7Q96M83 1385 aa13.85□□□□□ -0.19
C4A-258ENST00000496659 PLEKHH1Q9ULM0 1364 aa13.85□□□□□ -0.19
C4A-258ENST00000496659 NCOA3Q9Y6Q9 1424 aa13.85□□□□□ -0.19
C4A-258ENST00000496659 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
C4A-258ENST00000496659 MINK1Q8N4C8 1332 aaPredicted RBP13.85□□□□□ -0.19
C4A-258ENST00000496659 TULP4Q9NRJ4 1543 aa13.85□□□□□ -0.19
C4A-258ENST00000496659 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
C4A-258ENST00000496659 KIF7Q2M1P5 1343 aa13.84□□□□□ -0.19
C4A-258ENST00000496659 CDC42BPGQ6DT37 1551 aa13.83□□□□□ -0.19
C4A-258ENST00000496659 ADGRL3Q9HAR2 1447 aa13.83□□□□□ -0.2
C4A-258ENST00000496659 C14orf37Q86TY3 774 aa13.83□□□□□ -0.2
C4A-258ENST00000496659 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
C4A-258ENST00000496659 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
C4A-258ENST00000496659 POLR3GLQ9BT43 218 aa13.82□□□□□ -0.2
C4A-258ENST00000496659 WASHC2AQ641Q2 1341 aa13.82□□□□□ -0.2
C4A-258ENST00000496659 NINLQ9Y2I6 1382 aa13.82□□□□□ -0.2
C4A-258ENST00000496659 NALCNQ8IZF0 1738 aa13.81□□□□□ -0.2
C4A-258ENST00000496659 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.81□□□□□ -0.2
C4A-258ENST00000496659 SLAIN2Q9P270 581 aa13.81□□□□□ -0.2
C4A-258ENST00000496659 WASLO00401 505 aaPredicted RBP13.8□□□□□ -0.2
C4A-258ENST00000496659 MSH6P52701 1360 aa13.8□□□□□ -0.2
C4A-258ENST00000496659 DCCP43146 1447 aa13.8□□□□□ -0.2
C4A-258ENST00000496659 ROBO1Q9Y6N7 1651 aa13.79□□□□□ -0.2
C4A-258ENST00000496659 RGS17Q9UGC6 210 aaPredicted RBP13.79□□□□□ -0.2
C4A-258ENST00000496659 CDK19Q9BWU1 502 aa13.78□□□□□ -0.2
C4A-258ENST00000496659 ANKARQ7Z5J8 1434 aa13.78□□□□□ -0.2
C4A-258ENST00000496659 C11orf95C9JLR9 678 aaPredicted RBP13.77□□□□□ -0.21
C4A-258ENST00000496659 ITSN1Q15811 1721 aa13.77□□□□□ -0.21
C4A-258ENST00000496659 FMN2Q9NZ56 1722 aa13.77□□□□□ -0.21
C4A-258ENST00000496659 C19orf44Q9H6X5 657 aa13.76□□□□□ -0.21
C4A-258ENST00000496659 MYOM1P52179 1685 aa13.75□□□□□ -0.21
C4A-258ENST00000496659 ATP7BP35670 1465 aa13.75□□□□□ -0.21
C4A-258ENST00000496659 CABP2Q9NPB3 220 aa13.75□□□□□ -0.21
C4A-258ENST00000496659 ATF3P18847 181 aa13.74□□□□□ -0.21
C4A-258ENST00000496659 CADPS2Q86UW7 1296 aa13.74□□□□□ -0.21
C4A-258ENST00000496659 TOPAZ1Q8N9V7 1692 aa13.73□□□□□ -0.21
C4A-258ENST00000496659 TMC1Q8TDI8 760 aa13.73□□□□□ -0.21
C4A-258ENST00000496659 NUDT16Q96DE0 195 aaKnown RBP13.73□□□□□ -0.21
C4A-258ENST00000496659 CCDC61Q9Y6R9 512 aa13.73□□□□□ -0.21
C4A-258ENST00000496659 PPIP5K1Q6PFW1 1433 aa13.73□□□□□ -0.21
C4A-258ENST00000496659 DDX10Q13206 875 aaKnown RBP13.72□□□□□ -0.21
C4A-258ENST00000496659 TERF2IPQ9NYB0 399 aa13.72□□□□□ -0.21
C4A-258ENST00000496659 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.21
C4A-258ENST00000496659 PHLPP1O60346 1717 aa13.71□□□□□ -0.21
C4A-258ENST00000496659 HDGFL2Q7Z4V5 671 aaPredicted RBP13.71□□□□□ -0.21
C4A-258ENST00000496659 POTEAQ6S8J7 498 aa13.7□□□□□ -0.22
C4A-258ENST00000496659 USP32Q8NFA0 1604 aa13.7□□□□□ -0.22
C4A-258ENST00000496659 KIF1AQ12756 1690 aa13.69□□□□□ -0.22
C4A-258ENST00000496659 DIEXFQ68CQ4 756 aaKnown RBP13.69□□□□□ -0.22
C4A-258ENST00000496659 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
C4A-258ENST00000496659 MST1RQ04912 1400 aa13.68□□□□□ -0.22
C4A-258ENST00000496659 BRINP3Q76B58 766 aa13.68□□□□□ -0.22
C4A-258ENST00000496659 COL16A1Q07092 1604 aaPredicted RBP13.68□□□□□ -0.22
C4A-258ENST00000496659 C1orf167Q5SNV9 1468 aa13.67□□□□□ -0.22
C4A-258ENST00000496659 NUTM2FA1L443 756 aa13.67□□□□□ -0.22
C4A-258ENST00000496659 SLC12A5Q9H2X9 1139 aa13.67□□□□□ -0.22
C4A-258ENST00000496659 PANK3Q9H999 370 aa13.67□□□□□ -0.22
C4A-258ENST00000496659 CABP1Q9NZU7 370 aa13.67□□□□□ -0.22
C4A-258ENST00000496659 JCADQ9P266 1359 aa13.67□□□□□ -0.22
C4A-258ENST00000496659 PLEKHG3A1L390 1219 aa13.66□□□□□ -0.22
C4A-258ENST00000496659 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
C4A-258ENST00000496659 KNSTRNQ9Y448 316 aa13.66□□□□□ -0.22
C4A-258ENST00000496659 A0A1W2PP64 1363 aa13.66□□□□□ -0.22
C4A-258ENST00000496659 NGDNQ8NEJ9 315 aaKnown RBP13.65□□□□□ -0.22
C4A-258ENST00000496659 DDX17Q92841 729 aaKnown RBP13.65□□□□□ -0.22
C4A-258ENST00000496659 POLR3AO14802 1390 aaPredicted RBP13.65□□□□□ -0.22
C4A-258ENST00000496659 AKAP12Q02952 1782 aa13.65□□□□□ -0.22
C4A-258ENST00000496659 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
C4A-258ENST00000496659 NSD3Q9BZ95 1437 aa13.64□□□□□ -0.23
C4A-258ENST00000496659 MON2Q7Z3U7 1717 aa13.64□□□□□ -0.23
C4A-258ENST00000496659 CD163L1Q9NR16 1453 aa13.64□□□□□ -0.23
C4A-258ENST00000496659 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
C4A-258ENST00000496659 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
C4A-258ENST00000496659 ESCO1Q5FWF5 840 aa13.64□□□□□ -0.23
C4A-258ENST00000496659 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
C4A-258ENST00000496659 EDC4Q6P2E9 1401 aaKnown RBP13.64□□□□□ -0.23
C4A-258ENST00000496659 NSD2O96028 1365 aa13.63□□□□□ -0.23
C4A-258ENST00000496659 LRP6O75581 1613 aa13.63□□□□□ -0.23
C4A-258ENST00000496659 AHDC1Q5TGY3 1603 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms