RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 PXDNQ92626 1479 aa17.11■□□□□ 0.33
LRP8-211ENST00000496580 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
LRP8-211ENST00000496580 GLI3P10071 1580 aa17.08■□□□□ 0.32
LRP8-211ENST00000496580 XPCQ01831 940 aaPredicted RBP17.08■□□□□ 0.32
LRP8-211ENST00000496580 FOXD1Q16676 465 aa17.08■□□□□ 0.32
LRP8-211ENST00000496580 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.07■□□□□ 0.32
LRP8-211ENST00000496580 CDC42BPGQ6DT37 1551 aa17.06■□□□□ 0.32
LRP8-211ENST00000496580 HFM1A2PYH4 1435 aa17.06■□□□□ 0.32
LRP8-211ENST00000496580 CCDC125Q86Z20 511 aa17.06■□□□□ 0.32
LRP8-211ENST00000496580 GJD4Q96KN9 370 aaPredicted RBP17.06■□□□□ 0.32
LRP8-211ENST00000496580 BRWD3Q6RI45 1802 aa17.05■□□□□ 0.32
LRP8-211ENST00000496580 NPHP3Q7Z494 1330 aa17.05■□□□□ 0.32
LRP8-211ENST00000496580 ESCO1Q5FWF5 840 aa17.05■□□□□ 0.32
LRP8-211ENST00000496580 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
LRP8-211ENST00000496580 PPLO60437 1756 aa17.04■□□□□ 0.32
LRP8-211ENST00000496580 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
LRP8-211ENST00000496580 FOXO3O43524 673 aa17.03■□□□□ 0.32
LRP8-211ENST00000496580 DEFB132Q7Z7B7 95 aa17.03■□□□□ 0.32
LRP8-211ENST00000496580 SLIT2O94813 1529 aa17.02■□□□□ 0.32
LRP8-211ENST00000496580 NUTM2FA1L443 756 aa17.01■□□□□ 0.31
LRP8-211ENST00000496580 VGFO15240 615 aaPredicted RBP17.01■□□□□ 0.31
LRP8-211ENST00000496580 NAIPQ13075 1403 aa17.01■□□□□ 0.31
LRP8-211ENST00000496580 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
LRP8-211ENST00000496580 LRP5O75197 1615 aa16.99■□□□□ 0.31
LRP8-211ENST00000496580 USP32Q8NFA0 1604 aa16.99■□□□□ 0.31
LRP8-211ENST00000496580 UNC5CLQ8IV45 518 aa16.99■□□□□ 0.31
LRP8-211ENST00000496580 FMN2Q9NZ56 1722 aa16.96■□□□□ 0.31
LRP8-211ENST00000496580 WAPLQ7Z5K2 1190 aa16.96■□□□□ 0.31
LRP8-211ENST00000496580 PLEKHH1Q9ULM0 1364 aa16.96■□□□□ 0.31
LRP8-211ENST00000496580 PLCH1Q4KWH8 1693 aa16.96■□□□□ 0.31
LRP8-211ENST00000496580 LRPPRCP42704 1394 aaKnown RBP16.95■□□□□ 0.3
LRP8-211ENST00000496580 SPATA31A3Q5VYP0 1347 aa16.95■□□□□ 0.3
LRP8-211ENST00000496580 RPGRIP1LQ68CZ1 1315 aa16.95■□□□□ 0.3
LRP8-211ENST00000496580 KIF1AQ12756 1690 aa16.94■□□□□ 0.3
LRP8-211ENST00000496580 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
LRP8-211ENST00000496580 STK26Q9P289 416 aa16.94■□□□□ 0.3
LRP8-211ENST00000496580 KNDC1Q76NI1 1749 aa16.93■□□□□ 0.3
LRP8-211ENST00000496580 ABCA3Q99758 1704 aa16.93■□□□□ 0.3
LRP8-211ENST00000496580 TECPR2O15040 1411 aa16.93■□□□□ 0.3
LRP8-211ENST00000496580 ADGRF5Q8IZF2 1346 aa16.93■□□□□ 0.3
LRP8-211ENST00000496580 PSDA5PKW4 1024 aaPredicted RBP16.92■□□□□ 0.3
LRP8-211ENST00000496580 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
LRP8-211ENST00000496580 SF3B2Q13435 895 aaKnown RBP16.92■□□□□ 0.3
LRP8-211ENST00000496580 CCDC144AA2RUR9 1427 aa16.92■□□□□ 0.3
LRP8-211ENST00000496580 RRBP1Q9P2E9 1410 aaKnown RBP16.91■□□□□ 0.3
LRP8-211ENST00000496580 CABLES1Q8TDN4 633 aa16.91■□□□□ 0.3
LRP8-211ENST00000496580 RGPD8O14715 1765 aaPredicted RBP16.91■□□□□ 0.3
LRP8-211ENST00000496580 NWD2Q9ULI1 1742 aa16.9■□□□□ 0.3
LRP8-211ENST00000496580 TNS3Q68CZ2 1445 aa16.9■□□□□ 0.3
LRP8-211ENST00000496580 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
LRP8-211ENST00000496580 IFT172Q9UG01 1749 aa16.9■□□□□ 0.3
LRP8-211ENST00000496580 VPS72Q15906 364 aa16.89■□□□□ 0.29
LRP8-211ENST00000496580 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
LRP8-211ENST00000496580 KRT27Q7Z3Y8 459 aa16.88■□□□□ 0.29
LRP8-211ENST00000496580 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
LRP8-211ENST00000496580 NRAPQ86VF7 1730 aa16.87■□□□□ 0.29
LRP8-211ENST00000496580 HAP1P54257 671 aaPredicted RBP16.87■□□□□ 0.29
LRP8-211ENST00000496580 ONECUT3O60422 494 aaPredicted RBP16.86■□□□□ 0.29
LRP8-211ENST00000496580 HRCP23327 699 aa16.86■□□□□ 0.29
LRP8-211ENST00000496580 SLC4A1APQ9BWU0 796 aaKnown RBP16.86■□□□□ 0.29
LRP8-211ENST00000496580 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
LRP8-211ENST00000496580 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
LRP8-211ENST00000496580 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
LRP8-211ENST00000496580 A0A0G2JS52 829 aa16.83■□□□□ 0.28
LRP8-211ENST00000496580 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
LRP8-211ENST00000496580 BAG6P46379 1132 aa16.83■□□□□ 0.28
LRP8-211ENST00000496580 MYT1Q01538 1121 aa16.83■□□□□ 0.28
LRP8-211ENST00000496580 SPATA31E1Q6ZUB1 1445 aa16.83■□□□□ 0.28
LRP8-211ENST00000496580 NRXN1Q9ULB1 1477 aa16.83■□□□□ 0.28
LRP8-211ENST00000496580 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
LRP8-211ENST00000496580 LMOD2Q6P5Q4 547 aa16.82■□□□□ 0.28
LRP8-211ENST00000496580 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
LRP8-211ENST00000496580 SBNO1A3KN83 1393 aa16.81■□□□□ 0.28
LRP8-211ENST00000496580 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
LRP8-211ENST00000496580 EN1Q05925 392 aaPredicted RBP16.81■□□□□ 0.28
LRP8-211ENST00000496580 FAM98CQ17RN3 349 aaKnown RBP16.81■□□□□ 0.28
LRP8-211ENST00000496580 FAM182BQ5T319 152 aa16.81■□□□□ 0.28
LRP8-211ENST00000496580 TNS1Q9HBL0 1735 aaKnown RBP16.8■□□□□ 0.28
LRP8-211ENST00000496580 ANKRD30BQ9BXX2 1392 aa16.79■□□□□ 0.28
LRP8-211ENST00000496580 PSME1Q06323 249 aa16.79■□□□□ 0.28
LRP8-211ENST00000496580 TRPM3Q9HCF6 1732 aaPredicted RBP16.79■□□□□ 0.28
LRP8-211ENST00000496580 ARHGEF10O15013 1369 aa16.78■□□□□ 0.28
LRP8-211ENST00000496580 R3HDM1Q15032 1099 aaKnown RBP16.78■□□□□ 0.28
LRP8-211ENST00000496580 SAFB2Q14151 953 aaKnown RBP eCLIP16.77■□□□□ 0.28
LRP8-211ENST00000496580 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
LRP8-211ENST00000496580 BTG4Q9NY30 223 aa16.77■□□□□ 0.28
LRP8-211ENST00000496580 COL14A1Q05707 1796 aaKnown RBP16.77■□□□□ 0.27
LRP8-211ENST00000496580 THSD7AQ9UPZ6 1657 aa16.76■□□□□ 0.27
LRP8-211ENST00000496580 ALS2Q96Q42 1657 aa16.75■□□□□ 0.27
LRP8-211ENST00000496580 CRYBG1Q9Y4K1 1723 aa16.74■□□□□ 0.27
LRP8-211ENST00000496580 DISP2A7MBM2 1401 aa16.73■□□□□ 0.27
LRP8-211ENST00000496580 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
LRP8-211ENST00000496580 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
LRP8-211ENST00000496580 PRAM1Q96QH2 718 aa16.73■□□□□ 0.27
LRP8-211ENST00000496580 ADGRB2O60241 1585 aa16.72■□□□□ 0.27
LRP8-211ENST00000496580 CFAP70Q5T0N1 1121 aa16.72■□□□□ 0.27
LRP8-211ENST00000496580 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
LRP8-211ENST00000496580 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
LRP8-211ENST00000496580 ANKARQ7Z5J8 1434 aa16.71■□□□□ 0.27
LRP8-211ENST00000496580 C14orf93Q9H972 538 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms