RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 TECPR2O15040 1411 aa19.16■□□□□ 0.66
FN1-226ENST00000496542 LAMC1P11047 1609 aa19.15■□□□□ 0.66
FN1-226ENST00000496542 TMEM132EQ6IEE7 984 aa19.15■□□□□ 0.66
FN1-226ENST00000496542 WAPLQ7Z5K2 1190 aa19.14■□□□□ 0.65
FN1-226ENST00000496542 YTHDC2Q9H6S0 1430 aaKnown RBP19.12■□□□□ 0.65
FN1-226ENST00000496542 ABCC11Q96J66 1382 aa19.12■□□□□ 0.65
FN1-226ENST00000496542 PLEKHH1Q9ULM0 1364 aa19.12■□□□□ 0.65
FN1-226ENST00000496542 MYOM2P54296 1465 aa19.11■□□□□ 0.65
FN1-226ENST00000496542 AFF2P51816 1311 aa19.11■□□□□ 0.65
FN1-226ENST00000496542 NRXN1Q9ULB1 1477 aa19.1■□□□□ 0.65
FN1-226ENST00000496542 SOS2Q07890 1332 aaPredicted RBP19.1■□□□□ 0.65
FN1-226ENST00000496542 ESCO1Q5FWF5 840 aa19.09■□□□□ 0.65
FN1-226ENST00000496542 C8orf37Q96NL8 207 aa19.09■□□□□ 0.65
FN1-226ENST00000496542 NUTM2FA1L443 756 aa19.08■□□□□ 0.64
FN1-226ENST00000496542 CFAP70Q5T0N1 1121 aa19.07■□□□□ 0.64
FN1-226ENST00000496542 C14orf93Q9H972 538 aaKnown RBP19.07■□□□□ 0.64
FN1-226ENST00000496542 FMN2Q9NZ56 1722 aa19.07■□□□□ 0.64
FN1-226ENST00000496542 NPHP3Q7Z494 1330 aa19.06■□□□□ 0.64
FN1-226ENST00000496542 ADAMTS2O95450 1211 aa19.06■□□□□ 0.64
FN1-226ENST00000496542 RXRBP28702 533 aa19.05■□□□□ 0.64
FN1-226ENST00000496542 DHX57Q6P158 1386 aaKnown RBP19.05■□□□□ 0.64
FN1-226ENST00000496542 PXDNQ92626 1479 aa19.04■□□□□ 0.64
FN1-226ENST00000496542 XPCQ01831 940 aaPredicted RBP19.04■□□□□ 0.64
FN1-226ENST00000496542 COL22A1Q8NFW1 1626 aaPredicted RBP19.03■□□□□ 0.64
FN1-226ENST00000496542 FOXO3O43524 673 aa19.03■□□□□ 0.64
FN1-226ENST00000496542 NGLY1Q96IV0 654 aa19.03■□□□□ 0.64
FN1-226ENST00000496542 SAFB2Q14151 953 aaKnown RBP eCLIP19.01■□□□□ 0.63
FN1-226ENST00000496542 SIRT1Q96EB6 747 aa19.01■□□□□ 0.63
FN1-226ENST00000496542 KIF1AQ12756 1690 aa19.01■□□□□ 0.63
FN1-226ENST00000496542 PRAM1Q96QH2 718 aa19■□□□□ 0.63
FN1-226ENST00000496542 KDM2AQ9Y2K7 1162 aa19■□□□□ 0.63
FN1-226ENST00000496542 CDK12Q9NYV4 1490 aaPredicted RBP19■□□□□ 0.63
FN1-226ENST00000496542 RGPD8O14715 1765 aaPredicted RBP19■□□□□ 0.63
FN1-226ENST00000496542 HRCP23327 699 aa18.99■□□□□ 0.63
FN1-226ENST00000496542 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
FN1-226ENST00000496542 DLC1Q96QB1 1528 aa18.99■□□□□ 0.63
FN1-226ENST00000496542 ADGRB1O14514 1584 aa18.98■□□□□ 0.63
FN1-226ENST00000496542 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
FN1-226ENST00000496542 POGKQ9P215 609 aa18.98■□□□□ 0.63
FN1-226ENST00000496542 RBM6P78332 1123 aaKnown RBP18.96■□□□□ 0.63
FN1-226ENST00000496542 MARF1Q9Y4F3 1742 aaKnown RBP18.95■□□□□ 0.62
FN1-226ENST00000496542 RGS12O14924 1447 aa18.95■□□□□ 0.62
FN1-226ENST00000496542 USP21Q9UK80 565 aa18.95■□□□□ 0.62
FN1-226ENST00000496542 PHF8Q9UPP1 1060 aa18.94■□□□□ 0.62
FN1-226ENST00000496542 TRAK1Q9UPV9 953 aa18.94■□□□□ 0.62
FN1-226ENST00000496542 UPF1Q92900 1129 aaKnown RBP eCLIP18.93■□□□□ 0.62
FN1-226ENST00000496542 ADGRB2O60241 1585 aa18.93■□□□□ 0.62
FN1-226ENST00000496542 KRT28Q7Z3Y7 464 aa18.92■□□□□ 0.62
FN1-226ENST00000496542 SPATA31A3Q5VYP0 1347 aa18.92■□□□□ 0.62
FN1-226ENST00000496542 FNBP4Q8N3X1 1017 aaPredicted RBP18.91■□□□□ 0.62
FN1-226ENST00000496542 HIRIP3Q9BW71 556 aaPredicted RBP18.91■□□□□ 0.62
FN1-226ENST00000496542 TRPC5Q9UL62 973 aaPredicted RBP18.91■□□□□ 0.62
FN1-226ENST00000496542 USP32Q8NFA0 1604 aa18.91■□□□□ 0.62
FN1-226ENST00000496542 MINK1Q8N4C8 1332 aaPredicted RBP18.9■□□□□ 0.62
FN1-226ENST00000496542 TNS3Q68CZ2 1445 aa18.9■□□□□ 0.62
FN1-226ENST00000496542 ANKARQ7Z5J8 1434 aa18.9■□□□□ 0.62
FN1-226ENST00000496542 STAC3Q96MF2 364 aa18.89■□□□□ 0.61
FN1-226ENST00000496542 ATRNO75882 1429 aa18.89■□□□□ 0.61
FN1-226ENST00000496542 PSME1Q06323 249 aa18.88■□□□□ 0.61
FN1-226ENST00000496542 PLEKHG5O94827 1062 aa18.87■□□□□ 0.61
FN1-226ENST00000496542 ARHGEF28Q8N1W1 1705 aaKnown RBP18.87■□□□□ 0.61
FN1-226ENST00000496542 PMFBP1Q8TBY8 1022 aa18.87■□□□□ 0.61
FN1-226ENST00000496542 BCL9LQ86UU0 1499 aa18.86■□□□□ 0.61
FN1-226ENST00000496542 LMOD2Q6P5Q4 547 aa18.86■□□□□ 0.61
FN1-226ENST00000496542 TULP4Q9NRJ4 1543 aa18.85■□□□□ 0.61
FN1-226ENST00000496542 SBNO1A3KN83 1393 aa18.85■□□□□ 0.61
FN1-226ENST00000496542 EIF3AQ14152 1382 aaKnown RBP18.85■□□□□ 0.61
FN1-226ENST00000496542 HAP1P54257 671 aaPredicted RBP18.85■□□□□ 0.61
FN1-226ENST00000496542 ABCA3Q99758 1704 aa18.84■□□□□ 0.61
FN1-226ENST00000496542 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.84■□□□□ 0.61
FN1-226ENST00000496542 ARHGEF10O15013 1369 aa18.83■□□□□ 0.61
FN1-226ENST00000496542 PRR36Q9H6K5 1346 aa18.83■□□□□ 0.61
FN1-226ENST00000496542 WASLO00401 505 aaPredicted RBP18.83■□□□□ 0.6
FN1-226ENST00000496542 CABLES1Q8TDN4 633 aa18.83■□□□□ 0.6
FN1-226ENST00000496542 SLIT2O94813 1529 aa18.81■□□□□ 0.6
FN1-226ENST00000496542 TRPM3Q9HCF6 1732 aaPredicted RBP18.81■□□□□ 0.6
FN1-226ENST00000496542 KIAA1210Q9ULL0 1709 aa18.81■□□□□ 0.6
FN1-226ENST00000496542 ATAD2Q6PL18 1390 aa18.81■□□□□ 0.6
FN1-226ENST00000496542 UNC5CLQ8IV45 518 aa18.8■□□□□ 0.6
FN1-226ENST00000496542 GPRASP1Q5JY77 1395 aa18.8■□□□□ 0.6
FN1-226ENST00000496542 PLCH1Q4KWH8 1693 aa18.79■□□□□ 0.6
FN1-226ENST00000496542 GJD4Q96KN9 370 aaPredicted RBP18.79■□□□□ 0.6
FN1-226ENST00000496542 ITSN1Q15811 1721 aa18.79■□□□□ 0.6
FN1-226ENST00000496542 ALS2Q96Q42 1657 aa18.78■□□□□ 0.6
FN1-226ENST00000496542 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.6
FN1-226ENST00000496542 NGDNQ8NEJ9 315 aaKnown RBP18.77■□□□□ 0.6
FN1-226ENST00000496542 ATP7BP35670 1465 aa18.77■□□□□ 0.59
FN1-226ENST00000496542 GLI3P10071 1580 aa18.76■□□□□ 0.59
FN1-226ENST00000496542 NWD2Q9ULI1 1742 aa18.76■□□□□ 0.59
FN1-226ENST00000496542 EP400Q96L91 3159 aa18.76■□□□□ 0.59
FN1-226ENST00000496542 NBPF1Q3BBV0 1214 aa18.74■□□□□ 0.59
FN1-226ENST00000496542 NUDT16Q96DE0 195 aaKnown RBP18.74■□□□□ 0.59
FN1-226ENST00000496542 PAK3O75914 559 aaPredicted RBP18.73■□□□□ 0.59
FN1-226ENST00000496542 CDK19Q9BWU1 502 aa18.73■□□□□ 0.59
FN1-226ENST00000496542 CCDC9Q9Y3X0 531 aaKnown RBP18.72■□□□□ 0.59
FN1-226ENST00000496542 TOPAZ1Q8N9V7 1692 aa18.72■□□□□ 0.59
FN1-226ENST00000496542 FAM83GA6ND36 823 aa18.71■□□□□ 0.59
FN1-226ENST00000496542 VPS72Q15906 364 aa18.71■□□□□ 0.59
FN1-226ENST00000496542 BRWD3Q6RI45 1802 aa18.7■□□□□ 0.58
FN1-226ENST00000496542 CRYBG1Q9Y4K1 1723 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms