RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 CCDC146Q8IYE0 955 aa19.63■□□□□ 0.73
UBXN11-216ENST00000496466 STK26Q9P289 416 aa19.63■□□□□ 0.73
UBXN11-216ENST00000496466 NSD3Q9BZ95 1437 aa19.62■□□□□ 0.73
UBXN11-216ENST00000496466 SAFB2Q14151 953 aaKnown RBP eCLIP19.62■□□□□ 0.73
UBXN11-216ENST00000496466 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
UBXN11-216ENST00000496466 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
UBXN11-216ENST00000496466 ANP32AP39687 249 aaKnown RBP19.61■□□□□ 0.73
UBXN11-216ENST00000496466 C20orf194Q5TEA3 1177 aa19.61■□□□□ 0.73
UBXN11-216ENST00000496466 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
UBXN11-216ENST00000496466 EVC2Q86UK5 1308 aa19.6■□□□□ 0.73
UBXN11-216ENST00000496466 TULP4Q9NRJ4 1543 aa19.6■□□□□ 0.73
UBXN11-216ENST00000496466 CLTCQ00610 1675 aaKnown RBP19.59■□□□□ 0.73
UBXN11-216ENST00000496466 TRMT2AQ8IZ69 625 aaKnown RBP19.59■□□□□ 0.73
UBXN11-216ENST00000496466 APAF1O14727 1248 aa19.59■□□□□ 0.73
UBXN11-216ENST00000496466 STAG3Q9UJ98 1225 aa19.59■□□□□ 0.73
UBXN11-216ENST00000496466 KIF13AQ9H1H9 1805 aa19.59■□□□□ 0.73
UBXN11-216ENST00000496466 IPO9Q96P70 1041 aaKnown RBP19.58■□□□□ 0.73
UBXN11-216ENST00000496466 MS4A1P11836 297 aa19.58■□□□□ 0.72
UBXN11-216ENST00000496466 CABP2Q9NPB3 220 aa19.58■□□□□ 0.72
UBXN11-216ENST00000496466 PAK3O75914 559 aaPredicted RBP19.57■□□□□ 0.72
UBXN11-216ENST00000496466 POLR3AO14802 1390 aaPredicted RBP19.56■□□□□ 0.72
UBXN11-216ENST00000496466 PDE4AP27815 886 aa19.56■□□□□ 0.72
UBXN11-216ENST00000496466 MORC1Q86VD1 984 aa19.56■□□□□ 0.72
UBXN11-216ENST00000496466 TNNT2P45379 298 aaPredicted RBP19.55■□□□□ 0.72
UBXN11-216ENST00000496466 PUS7Q96PZ0 661 aaKnown RBP19.55■□□□□ 0.72
UBXN11-216ENST00000496466 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
UBXN11-216ENST00000496466 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.53■□□□□ 0.72
UBXN11-216ENST00000496466 BACH2Q9BYV9 841 aa19.53■□□□□ 0.72
UBXN11-216ENST00000496466 ARHGEF40Q8TER5 1519 aa19.53■□□□□ 0.72
UBXN11-216ENST00000496466 PTPRMP28827 1452 aa19.53■□□□□ 0.72
UBXN11-216ENST00000496466 YTHDC2Q9H6S0 1430 aaKnown RBP19.53■□□□□ 0.72
UBXN11-216ENST00000496466 NGEFQ8N5V2 710 aa19.52■□□□□ 0.72
UBXN11-216ENST00000496466 PRAM1Q96QH2 718 aa19.52■□□□□ 0.72
UBXN11-216ENST00000496466 SPATA31D1Q6ZQQ2 1576 aa19.52■□□□□ 0.72
UBXN11-216ENST00000496466 NKTRP30414 1462 aaKnown RBP19.52■□□□□ 0.71
UBXN11-216ENST00000496466 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
UBXN11-216ENST00000496466 A2ML1A8K2U0 1454 aa19.51■□□□□ 0.71
UBXN11-216ENST00000496466 MINK1Q8N4C8 1332 aaPredicted RBP19.51■□□□□ 0.71
UBXN11-216ENST00000496466 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
UBXN11-216ENST00000496466 ANKRD36BQ8N2N9 1353 aa19.51■□□□□ 0.71
UBXN11-216ENST00000496466 E9PSI1 815 aa19.51■□□□□ 0.71
UBXN11-216ENST00000496466 SRPK2P78362 688 aaKnown RBP19.51■□□□□ 0.71
UBXN11-216ENST00000496466 CGNL1Q0VF96 1302 aa19.5■□□□□ 0.71
UBXN11-216ENST00000496466 POGKQ9P215 609 aa19.5■□□□□ 0.71
UBXN11-216ENST00000496466 SHPRHQ149N8 1683 aa19.49■□□□□ 0.71
UBXN11-216ENST00000496466 ZBTB47Q9UFB7 747 aaPredicted RBP19.49■□□□□ 0.71
UBXN11-216ENST00000496466 USP32Q8NFA0 1604 aa19.49■□□□□ 0.71
UBXN11-216ENST00000496466 SKAP1Q86WV1 359 aa19.48■□□□□ 0.71
UBXN11-216ENST00000496466 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
UBXN11-216ENST00000496466 RIMS2Q9UQ26 1411 aa19.47■□□□□ 0.71
UBXN11-216ENST00000496466 CENPQQ7L2Z9 268 aaPredicted RBP19.47■□□□□ 0.71
UBXN11-216ENST00000496466 ESF1Q9H501 851 aaKnown RBP19.46■□□□□ 0.71
UBXN11-216ENST00000496466 ZMYM3Q14202 1370 aa19.46■□□□□ 0.71
UBXN11-216ENST00000496466 NPM2Q86SE8 214 aaKnown RBP19.46■□□□□ 0.71
UBXN11-216ENST00000496466 A0A1W2PP64 1363 aa19.45■□□□□ 0.7
UBXN11-216ENST00000496466 BCAR3O75815 825 aa19.45■□□□□ 0.7
UBXN11-216ENST00000496466 WWC1Q8IX03 1113 aa19.45■□□□□ 0.7
UBXN11-216ENST00000496466 MTHFSP49914 203 aa19.44■□□□□ 0.7
UBXN11-216ENST00000496466 NINLQ9Y2I6 1382 aa19.42■□□□□ 0.7
UBXN11-216ENST00000496466 RUNDC1Q96C34 613 aa19.42■□□□□ 0.7
UBXN11-216ENST00000496466 CDK19Q9BWU1 502 aa19.42■□□□□ 0.7
UBXN11-216ENST00000496466 NSD2O96028 1365 aa19.41■□□□□ 0.7
UBXN11-216ENST00000496466 ATAD2Q6PL18 1390 aa19.41■□□□□ 0.7
UBXN11-216ENST00000496466 WAPLQ7Z5K2 1190 aa19.41■□□□□ 0.7
UBXN11-216ENST00000496466 ABCC11Q96J66 1382 aa19.4■□□□□ 0.7
UBXN11-216ENST00000496466 IQSEC2Q5JU85 1478 aa19.4■□□□□ 0.7
UBXN11-216ENST00000496466 CD163L1Q9NR16 1453 aa19.39■□□□□ 0.69
UBXN11-216ENST00000496466 GGNBP2Q9H3C7 697 aa19.39■□□□□ 0.69
UBXN11-216ENST00000496466 TCP11L2Q8N4U5 519 aa19.38■□□□□ 0.69
UBXN11-216ENST00000496466 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
UBXN11-216ENST00000496466 TERF2IPQ9NYB0 399 aa19.38■□□□□ 0.69
UBXN11-216ENST00000496466 SETD1AO15047 1707 aaKnown RBP19.38■□□□□ 0.69
UBXN11-216ENST00000496466 NBR1Q14596 966 aa19.37■□□□□ 0.69
UBXN11-216ENST00000496466 RRP7AQ9Y3A4 280 aaKnown RBP19.37■□□□□ 0.69
UBXN11-216ENST00000496466 NEUROD2Q15784 382 aa19.37■□□□□ 0.69
UBXN11-216ENST00000496466 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
UBXN11-216ENST00000496466 CABP1Q9NZU7 370 aa19.36■□□□□ 0.69
UBXN11-216ENST00000496466 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.36■□□□□ 0.69
UBXN11-216ENST00000496466 DLC1Q96QB1 1528 aa19.36■□□□□ 0.69
UBXN11-216ENST00000496466 TNRQ92752 1358 aa19.35■□□□□ 0.69
UBXN11-216ENST00000496466 NRXN3Q9Y4C0 1643 aa19.35■□□□□ 0.69
UBXN11-216ENST00000496466 FYB1O15117 783 aa19.35■□□□□ 0.69
UBXN11-216ENST00000496466 METP08581 1390 aa19.35■□□□□ 0.69
UBXN11-216ENST00000496466 PDE3AQ14432 1141 aa19.35■□□□□ 0.69
UBXN11-216ENST00000496466 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
UBXN11-216ENST00000496466 HDGFL2Q7Z4V5 671 aaPredicted RBP19.33■□□□□ 0.69
UBXN11-216ENST00000496466 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
UBXN11-216ENST00000496466 NLRP1Q9C000 1473 aa19.32■□□□□ 0.68
UBXN11-216ENST00000496466 TXNDC2Q86VQ3 553 aa19.31■□□□□ 0.68
UBXN11-216ENST00000496466 U2AF1L5P0DN76 240 aaPredicted RBP19.3■□□□□ 0.68
UBXN11-216ENST00000496466 U2AF1Q01081 240 aaKnown RBP eCLIP19.3■□□□□ 0.68
UBXN11-216ENST00000496466 RARSP54136 660 aaKnown RBP19.3■□□□□ 0.68
UBXN11-216ENST00000496466 FAM161AQ3B820 660 aa19.3■□□□□ 0.68
UBXN11-216ENST00000496466 NCBP3Q53F19 620 aaKnown RBP19.3■□□□□ 0.68
UBXN11-216ENST00000496466 PRKCSHP14314 528 aaPredicted RBP19.29■□□□□ 0.68
UBXN11-216ENST00000496466 CANXP27824 592 aaKnown RBP19.29■□□□□ 0.68
UBXN11-216ENST00000496466 PANK1Q8TE04 598 aa19.29■□□□□ 0.68
UBXN11-216ENST00000496466 HDGFP51858 240 aaKnown RBP19.29■□□□□ 0.68
UBXN11-216ENST00000496466 C8orf34Q49A92 452 aa19.29■□□□□ 0.68
UBXN11-216ENST00000496466 IGHDP01880 384 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms