RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
RNF220-217ENST00000496262 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
RNF220-217ENST00000496262 CDC42BPGQ6DT37 1551 aa16.14■□□□□ 0.17
RNF220-217ENST00000496262 PIK3C2GO75747 1445 aa16.14■□□□□ 0.17
RNF220-217ENST00000496262 XPCQ01831 940 aaPredicted RBP16.14■□□□□ 0.17
RNF220-217ENST00000496262 SOS2Q07890 1332 aaPredicted RBP16.14■□□□□ 0.17
RNF220-217ENST00000496262 IFT172Q9UG01 1749 aa16.14■□□□□ 0.17
RNF220-217ENST00000496262 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
RNF220-217ENST00000496262 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
RNF220-217ENST00000496262 NGLY1Q96IV0 654 aa16.13■□□□□ 0.17
RNF220-217ENST00000496262 LAMC1P11047 1609 aa16.12■□□□□ 0.17
RNF220-217ENST00000496262 QTRT2Q9H974 415 aaKnown RBP16.12■□□□□ 0.17
RNF220-217ENST00000496262 TECPR2O15040 1411 aa16.11■□□□□ 0.17
RNF220-217ENST00000496262 UPF1Q92900 1129 aaKnown RBP eCLIP16.11■□□□□ 0.17
RNF220-217ENST00000496262 RAB3GAP2Q9H2M9 1393 aa16.11■□□□□ 0.17
RNF220-217ENST00000496262 FOXO3O43524 673 aa16.1■□□□□ 0.17
RNF220-217ENST00000496262 NPHP3Q7Z494 1330 aa16.1■□□□□ 0.17
RNF220-217ENST00000496262 YTHDC2Q9H6S0 1430 aaKnown RBP16.1■□□□□ 0.17
RNF220-217ENST00000496262 PCGF6Q9BYE7 350 aa16.09■□□□□ 0.17
RNF220-217ENST00000496262 ABCC11Q96J66 1382 aa16.09■□□□□ 0.17
RNF220-217ENST00000496262 RGS12O14924 1447 aa16.09■□□□□ 0.17
RNF220-217ENST00000496262 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
RNF220-217ENST00000496262 PXDNQ92626 1479 aa16.08■□□□□ 0.16
RNF220-217ENST00000496262 CDK12Q9NYV4 1490 aaPredicted RBP16.08■□□□□ 0.16
RNF220-217ENST00000496262 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.16
RNF220-217ENST00000496262 SAFB2Q14151 953 aaKnown RBP eCLIP16.07■□□□□ 0.16
RNF220-217ENST00000496262 CFAP70Q5T0N1 1121 aa16.07■□□□□ 0.16
RNF220-217ENST00000496262 USP21Q9UK80 565 aa16.07■□□□□ 0.16
RNF220-217ENST00000496262 ACIN1Q9UKV3 1341 aaKnown RBP16.05■□□□□ 0.16
RNF220-217ENST00000496262 C14orf93Q9H972 538 aaKnown RBP16.05■□□□□ 0.16
RNF220-217ENST00000496262 COL22A1Q8NFW1 1626 aaPredicted RBP16.05■□□□□ 0.16
RNF220-217ENST00000496262 MYOM2P54296 1465 aa16.04■□□□□ 0.16
RNF220-217ENST00000496262 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
RNF220-217ENST00000496262 FMN2Q9NZ56 1722 aa16.04■□□□□ 0.16
RNF220-217ENST00000496262 NRXN1Q9ULB1 1477 aa16.03■□□□□ 0.16
RNF220-217ENST00000496262 DHX57Q6P158 1386 aaKnown RBP16.03■□□□□ 0.16
RNF220-217ENST00000496262 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
RNF220-217ENST00000496262 TRPC5Q9UL62 973 aaPredicted RBP16.02■□□□□ 0.16
RNF220-217ENST00000496262 POGKQ9P215 609 aa16.01■□□□□ 0.15
RNF220-217ENST00000496262 KDM2AQ9Y2K7 1162 aa16.01■□□□□ 0.15
RNF220-217ENST00000496262 KRT28Q7Z3Y7 464 aa16■□□□□ 0.15
RNF220-217ENST00000496262 FNBP4Q8N3X1 1017 aaPredicted RBP16■□□□□ 0.15
RNF220-217ENST00000496262 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
RNF220-217ENST00000496262 SIRT1Q96EB6 747 aa15.99■□□□□ 0.15
RNF220-217ENST00000496262 PHF8Q9UPP1 1060 aa15.99■□□□□ 0.15
RNF220-217ENST00000496262 ATRNO75882 1429 aa15.99■□□□□ 0.15
RNF220-217ENST00000496262 SPATA31A3Q5VYP0 1347 aa15.98■□□□□ 0.15
RNF220-217ENST00000496262 HAP1P54257 671 aaPredicted RBP15.98■□□□□ 0.15
RNF220-217ENST00000496262 LMOD2Q6P5Q4 547 aa15.98■□□□□ 0.15
RNF220-217ENST00000496262 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
RNF220-217ENST00000496262 HIRIP3Q9BW71 556 aaPredicted RBP15.98■□□□□ 0.15
RNF220-217ENST00000496262 TRAK1Q9UPV9 953 aa15.98■□□□□ 0.15
RNF220-217ENST00000496262 BCL9LQ86UU0 1499 aa15.97■□□□□ 0.15
RNF220-217ENST00000496262 ATAD2Q6PL18 1390 aa15.96■□□□□ 0.15
RNF220-217ENST00000496262 RGPD8O14715 1765 aaPredicted RBP15.95■□□□□ 0.14
RNF220-217ENST00000496262 TNS3Q68CZ2 1445 aa15.95■□□□□ 0.14
RNF220-217ENST00000496262 MARF1Q9Y4F3 1742 aaKnown RBP15.95■□□□□ 0.14
RNF220-217ENST00000496262 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
RNF220-217ENST00000496262 CABLES1Q8TDN4 633 aa15.95■□□□□ 0.14
RNF220-217ENST00000496262 ADGRB1O14514 1584 aa15.95■□□□□ 0.14
RNF220-217ENST00000496262 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
RNF220-217ENST00000496262 DLC1Q96QB1 1528 aa15.94■□□□□ 0.14
RNF220-217ENST00000496262 PSME1Q06323 249 aa15.94■□□□□ 0.14
RNF220-217ENST00000496262 USP32Q8NFA0 1604 aa15.93■□□□□ 0.14
RNF220-217ENST00000496262 GJD4Q96KN9 370 aaPredicted RBP15.92■□□□□ 0.14
RNF220-217ENST00000496262 UNC5CLQ8IV45 518 aa15.91■□□□□ 0.14
RNF220-217ENST00000496262 ANKARQ7Z5J8 1434 aa15.9■□□□□ 0.14
RNF220-217ENST00000496262 ADGRB2O60241 1585 aa15.9■□□□□ 0.14
RNF220-217ENST00000496262 RALGAPBQ86X10 1494 aa15.9■□□□□ 0.14
RNF220-217ENST00000496262 SLIT2O94813 1529 aa15.89■□□□□ 0.13
RNF220-217ENST00000496262 SBNO1A3KN83 1393 aa15.89■□□□□ 0.13
RNF220-217ENST00000496262 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
RNF220-217ENST00000496262 ARHGEF10O15013 1369 aa15.88■□□□□ 0.13
RNF220-217ENST00000496262 PRR36Q9H6K5 1346 aa15.88■□□□□ 0.13
RNF220-217ENST00000496262 GLI3P10071 1580 aa15.87■□□□□ 0.13
RNF220-217ENST00000496262 EP400Q96L91 3159 aa15.87■□□□□ 0.13
RNF220-217ENST00000496262 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
RNF220-217ENST00000496262 EIF3AQ14152 1382 aaKnown RBP15.87■□□□□ 0.13
RNF220-217ENST00000496262 GPRASP1Q5JY77 1395 aa15.87■□□□□ 0.13
RNF220-217ENST00000496262 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
RNF220-217ENST00000496262 WASLO00401 505 aaPredicted RBP15.86■□□□□ 0.13
RNF220-217ENST00000496262 PLCH1Q4KWH8 1693 aa15.86■□□□□ 0.13
RNF220-217ENST00000496262 ABCA3Q99758 1704 aa15.85■□□□□ 0.13
RNF220-217ENST00000496262 TRIM26Q12899 539 aaPredicted RBP15.85■□□□□ 0.13
RNF220-217ENST00000496262 NGDNQ8NEJ9 315 aaKnown RBP15.85■□□□□ 0.13
RNF220-217ENST00000496262 PAK3O75914 559 aaPredicted RBP15.84■□□□□ 0.13
RNF220-217ENST00000496262 TRPM3Q9HCF6 1732 aaPredicted RBP15.83■□□□□ 0.13
RNF220-217ENST00000496262 A0A0G2JS52 829 aa15.83■□□□□ 0.12
RNF220-217ENST00000496262 FAM83GA6ND36 823 aa15.83■□□□□ 0.12
RNF220-217ENST00000496262 MYT1Q01538 1121 aa15.83■□□□□ 0.12
RNF220-217ENST00000496262 STAC3Q96MF2 364 aa15.83■□□□□ 0.12
RNF220-217ENST00000496262 ARHGEF28Q8N1W1 1705 aaKnown RBP15.82■□□□□ 0.12
RNF220-217ENST00000496262 VPS72Q15906 364 aa15.82■□□□□ 0.12
RNF220-217ENST00000496262 SEPT12Q8IYM1 358 aa15.82■□□□□ 0.12
RNF220-217ENST00000496262 ATP7BP35670 1465 aa15.8■□□□□ 0.12
RNF220-217ENST00000496262 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
RNF220-217ENST00000496262 BTG4Q9NY30 223 aa15.8■□□□□ 0.12
RNF220-217ENST00000496262 ALS2Q96Q42 1657 aa15.79■□□□□ 0.12
RNF220-217ENST00000496262 CCDC125Q86Z20 511 aa15.79■□□□□ 0.12
RNF220-217ENST00000496262 CDK19Q9BWU1 502 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms