RNA–Protein interactions for RNA: ENST00000496183.5

RBM39-241, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-241ENST00000496183 RETREG3Q86VR2 466 aa10.79□□□□□ -0.68
RBM39-241ENST00000496183 GUCA2AQ02747 115 aa10.78□□□□□ -0.68
RBM39-241ENST00000496183 HLA-CQ95604 372 aa10.78□□□□□ -0.68
RBM39-241ENST00000496183 PRKD2Q9BZL6 878 aa10.78□□□□□ -0.68
RBM39-241ENST00000496183 MTMR2Q13614 643 aa10.77□□□□□ -0.69
RBM39-241ENST00000496183 RSBN1LQ6PCB5 846 aaPredicted RBP10.77□□□□□ -0.69
RBM39-241ENST00000496183 RIC3Q7Z5B4 369 aa10.77□□□□□ -0.69
RBM39-241ENST00000496183 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
RBM39-241ENST00000496183 NDUFV2P19404 249 aa10.76□□□□□ -0.69
RBM39-241ENST00000496183 FAM160A2Q8N612 972 aaPredicted RBP10.76□□□□□ -0.69
RBM39-241ENST00000496183 SPTLC1O15269 473 aa10.75□□□□□ -0.69
RBM39-241ENST00000496183 ZBTB3Q9H5J0 574 aa10.75□□□□□ -0.69
RBM39-241ENST00000496183 ATP1B4Q9UN42 357 aaPredicted RBP10.75□□□□□ -0.69
RBM39-241ENST00000496183 ZBTB24O43167 697 aaPredicted RBP10.74□□□□□ -0.69
RBM39-241ENST00000496183 PRPF38BQ5VTL8 546 aaKnown RBP10.74□□□□□ -0.69
RBM39-241ENST00000496183 FCF1Q9Y324 198 aaKnown RBP10.74□□□□□ -0.69
RBM39-241ENST00000496183 PPEF1O14829 653 aaPredicted RBP10.73□□□□□ -0.69
RBM39-241ENST00000496183 SLC19A1P41440 591 aa10.73□□□□□ -0.69
RBM39-241ENST00000496183 CLK2P49760 499 aaKnown RBP10.73□□□□□ -0.69
RBM39-241ENST00000496183 MMP16P51512 607 aa10.73□□□□□ -0.69
RBM39-241ENST00000496183 MYSM1Q5VVJ2 828 aa10.73□□□□□ -0.69
RBM39-241ENST00000496183 JUNDP17535 347 aa10.72□□□□□ -0.69
RBM39-241ENST00000496183 TUSC1Q2TAM9 212 aa10.72□□□□□ -0.69
RBM39-241ENST00000496183 PRDM9Q9NQV7 894 aa10.72□□□□□ -0.69
RBM39-241ENST00000496183 PCDHGC3Q9UN70 934 aa10.72□□□□□ -0.69
RBM39-241ENST00000496183 NUTM2BA6NNL0 878 aaPredicted RBP10.71□□□□□ -0.69
RBM39-241ENST00000496183 NUTM2EB1AL46 878 aaPredicted RBP10.71□□□□□ -0.69
RBM39-241ENST00000496183 DXOO77932 396 aaKnown RBP10.71□□□□□ -0.69
RBM39-241ENST00000496183 NUTM2DQ5VT03 806 aaPredicted RBP10.71□□□□□ -0.69
RBM39-241ENST00000496183 NUTM2AQ8IVF1 878 aaPredicted RBP10.71□□□□□ -0.69
RBM39-241ENST00000496183 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.69
RBM39-241ENST00000496183 IRX2Q9BZI1 471 aaPredicted RBP10.7□□□□□ -0.7
RBM39-241ENST00000496183 FAM117AQ9C073 453 aa10.7□□□□□ -0.7
RBM39-241ENST00000496183 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
RBM39-241ENST00000496183 RPIAP49247 311 aa10.69□□□□□ -0.7
RBM39-241ENST00000496183 CSPP1Q1MSJ5 1256 aa10.69□□□□□ -0.7
RBM39-241ENST00000496183 SH3D19Q5HYK7 790 aa10.69□□□□□ -0.7
RBM39-241ENST00000496183 PRR7Q8TB68 274 aa10.69□□□□□ -0.7
RBM39-241ENST00000496183 LAPTM4AQ15012 233 aa10.68□□□□□ -0.7
RBM39-241ENST00000496183 DESI1Q6ICB0 168 aa10.68□□□□□ -0.7
RBM39-241ENST00000496183 CCDC24Q8N4L8 307 aa10.68□□□□□ -0.7
RBM39-241ENST00000496183 SKIV2LQ15477 1246 aaKnown RBP10.67□□□□□ -0.7
RBM39-241ENST00000496183 HRCP23327 699 aa10.66□□□□□ -0.7
RBM39-241ENST00000496183 BRPF1P55201 1214 aaPredicted RBP10.66□□□□□ -0.7
RBM39-241ENST00000496183 HELBQ8NG08 1087 aaPredicted RBP10.66□□□□□ -0.7
RBM39-241ENST00000496183 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
RBM39-241ENST00000496183 POLR3EQ9NVU0 708 aa10.66□□□□□ -0.7
RBM39-241ENST00000496183 LIMD1Q9UGP4 676 aa10.66□□□□□ -0.7
RBM39-241ENST00000496183 PTPRNQ16849 979 aa10.65□□□□□ -0.7
RBM39-241ENST00000496183 SPRYD7Q5W111 196 aa10.65□□□□□ -0.7
RBM39-241ENST00000496183 ZNF598Q86UK7 904 aaKnown RBP10.65□□□□□ -0.7
RBM39-241ENST00000496183 PCDHB15Q9Y5E8 787 aa10.65□□□□□ -0.7
RBM39-241ENST00000496183 CCNYL3P0C7X3 344 aa10.63□□□□□ -0.71
RBM39-241ENST00000496183 ZNF697Q5TEC3 545 aa10.63□□□□□ -0.71
RBM39-241ENST00000496183 TSC1Q92574 1164 aa10.63□□□□□ -0.71
RBM39-241ENST00000496183 GOPCQ9HD26 462 aa10.63□□□□□ -0.71
RBM39-241ENST00000496183 LILRB3O75022 631 aa10.62□□□□□ -0.71
RBM39-241ENST00000496183 LIAT1Q6ZQX7 453 aa10.62□□□□□ -0.71
RBM39-241ENST00000496183 PCMTD1Q96MG8 357 aaPredicted RBP10.62□□□□□ -0.71
RBM39-241ENST00000496183 PLA2G2CQ5R387 149 aa10.61□□□□□ -0.71
RBM39-241ENST00000496183 CABLES1Q8TDN4 633 aa10.61□□□□□ -0.71
RBM39-241ENST00000496183 PLEKHG3A1L390 1219 aa10.6□□□□□ -0.71
RBM39-241ENST00000496183 IL27Q8NEV9 243 aa10.6□□□□□ -0.71
RBM39-241ENST00000496183 QPCTQ16769 361 aa10.59□□□□□ -0.71
RBM39-241ENST00000496183 PDZRN3Q9UPQ7 1066 aa10.59□□□□□ -0.71
RBM39-241ENST00000496183 CFAP99D6REC4 459 aa10.58□□□□□ -0.72
RBM39-241ENST00000496183 GFRA3O60609 400 aa10.58□□□□□ -0.72
RBM39-241ENST00000496183 PRKCSHP14314 528 aaPredicted RBP10.58□□□□□ -0.72
RBM39-241ENST00000496183 TRIM32Q13049 653 aa10.58□□□□□ -0.72
RBM39-241ENST00000496183 CTHP32929 405 aa10.57□□□□□ -0.72
RBM39-241ENST00000496183 LYPD8Q6UX82 237 aa10.57□□□□□ -0.72
RBM39-241ENST00000496183 NRG2O14511 850 aaPredicted RBP10.56□□□□□ -0.72
RBM39-241ENST00000496183 KCNH2Q12809 1159 aa10.56□□□□□ -0.72
RBM39-241ENST00000496183 EMID1Q96A84 441 aaPredicted RBP10.56□□□□□ -0.72
RBM39-241ENST00000496183 EVA1BQ9NVM1 165 aa10.56□□□□□ -0.72
RBM39-241ENST00000496183 PRR20EP86478 221 aa10.55□□□□□ -0.72
RBM39-241ENST00000496183 PRR20CP86479 221 aa10.55□□□□□ -0.72
RBM39-241ENST00000496183 PRR20DP86480 221 aa10.55□□□□□ -0.72
RBM39-241ENST00000496183 PRR20BP86481 221 aa10.55□□□□□ -0.72
RBM39-241ENST00000496183 PRR20AP86496 221 aa10.55□□□□□ -0.72
RBM39-241ENST00000496183 WNT7BP56706 349 aa10.54□□□□□ -0.72
RBM39-241ENST00000496183 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.54□□□□□ -0.72
RBM39-241ENST00000496183 FOXC1Q12948 553 aa10.53□□□□□ -0.72
RBM39-241ENST00000496183 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
RBM39-241ENST00000496183 PPP2R2DQ66LE6 453 aa10.53□□□□□ -0.72
RBM39-241ENST00000496183 PROCA1Q8NCQ7 364 aaPredicted RBP10.52□□□□□ -0.73
RBM39-241ENST00000496183 ARMC2Q8NEN0 867 aa10.52□□□□□ -0.73
RBM39-241ENST00000496183 UNC93B1Q9H1C4 597 aa10.52□□□□□ -0.73
RBM39-241ENST00000496183 Q6ZNB5 142 aa10.51□□□□□ -0.73
RBM39-241ENST00000496183 WNT7AO00755 349 aa10.5□□□□□ -0.73
RBM39-241ENST00000496183 CYP4X1Q8N118 509 aa10.5□□□□□ -0.73
RBM39-241ENST00000496183 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
RBM39-241ENST00000496183 GDF9O60383 454 aa10.49□□□□□ -0.73
RBM39-241ENST00000496183 PNMA1Q8ND90 353 aa10.49□□□□□ -0.73
RBM39-241ENST00000496183 TMEM259Q4ZIN3 620 aa10.48□□□□□ -0.73
RBM39-241ENST00000496183 AP1G2O75843 785 aa10.47□□□□□ -0.73
RBM39-241ENST00000496183 F12P00748 615 aaPredicted RBP10.47□□□□□ -0.73
RBM39-241ENST00000496183 PKDCCQ504Y2 493 aa10.47□□□□□ -0.73
RBM39-241ENST00000496183 NBPF14Q5TI25 921 aa10.47□□□□□ -0.73
RBM39-241ENST00000496183 PTCRAQ6ISU1 281 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms